RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 C2orf74A8MZ97 194 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 INMT-MINDY4F8WBC2 141 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 ZNF207O43670 478 aaKnown RBP2.75□□□□□ -1.97
VPS13D-207ENST00000476169 CCNKO75909 580 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 ATG12O94817 140 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 GPR75O95800 540 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 MT-CO2P00403 227 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 IFNA1P01562 189 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 IFNA21P01568 189 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 KCNE1P15382 129 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 CCL1P22362 96 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 OR10J1P30954 320 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 LINC00313P59037 77 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 KCNJ8Q15842 424 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 PYCR3Q53H96 274 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 PRSS54Q6PEW0 395 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 MIR7-3HGQ8N6C7 128 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 KRTCAP2Q8N6L1 136 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 ZNF676Q8N7Q3 588 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 OR13C6PQ8NH95 151 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 PYDC1Q8WXC3 89 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 ZHX1-C8orf76Q96EF9 292 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 ALX4Q9H161 411 aaPredicted RBP2.75□□□□□ -1.97
VPS13D-207ENST00000476169 C14orf105Q9NVL8 296 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 IDI2-AS1Q9NZ38 188 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 DHCR7Q9UBM7 475 aaKnown RBP2.75□□□□□ -1.97
VPS13D-207ENST00000476169 ANAPC10Q9UM13 185 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 COL1A1P02452 1464 aaPredicted RBP2.75□□□□□ -1.97
VPS13D-207ENST00000476169 MED23Q9ULK4 1368 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 KIAA1551Q9HCM1 1747 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 IGLV4-69A0A075B6H9 119 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 IGHV3-21A0A0B4J1V1 117 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 IGHV3-43A0A0B4J1X8 118 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 FAM236DA0A1B0GTK5 79 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 LINC00862A6NCI5 91 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 A6NED7 52 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 FAM159BA6NKW6 160 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 OR4C45A6NMZ5 311 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 ZNF850A8MQ14 1090 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 CRYZL1O95825 349 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 IGHV1-46P01743 117 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 OPN1SWP03999 348 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 FAM236CP0DP71 79 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 HIST1H1TP22492 207 aaPredicted RBP2.74□□□□□ -1.97
VPS13D-207ENST00000476169 CDK2P24941 298 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 CD34P28906 385 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 RUNX1Q01196 453 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 BSPH1Q075Z2 132 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 PDGFRLQ15198 375 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 MMDQ15546 238 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 SP6Q3SY56 376 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 TEX36Q5VZQ5 186 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 Q6ZR03 302 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 TMPPEQ6ZT21 453 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 DAZ4Q86SG3 579 aaKnown RBP2.74□□□□□ -1.97
VPS13D-207ENST00000476169 C1orf174Q8IYL3 243 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 Q8N7P7 452 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 FRZBQ92765 325 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 KLK6Q92876 244 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 CMBLQ96DG6 245 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 MS4A6EQ96DS6 147 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 CNBD2Q96M20 576 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 KLF6Q99612 283 aaPredicted RBP2.74□□□□□ -1.97
VPS13D-207ENST00000476169 RNASE7Q9H1E1 156 aaKnown RBP2.74□□□□□ -1.97
VPS13D-207ENST00000476169 FAM60AQ9NP50 221 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 DAZ1Q9NQZ3 744 aaKnown RBP2.74□□□□□ -1.97
VPS13D-207ENST00000476169 INIPQ9NRY2 104 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 CISHQ9NSE2 258 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 UQCC1Q9NVA1 299 aa2.74□□□□□ -1.97
VPS13D-207ENST00000476169 MRPL27Q9P0M9 148 aaKnown RBP2.74□□□□□ -1.97
VPS13D-207ENST00000476169 SCN7AQ01118 1682 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 PINLYPA6NC86 204 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 IL4P05112 153 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 PTHLHP12272 177 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 NTF3P20783 257 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 DAPP51397 102 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 ZNF133P52736 654 aaPredicted RBP2.73□□□□□ -1.97
VPS13D-207ENST00000476169 TCTAP57738 103 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 GNA12Q03113 381 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 TSNQ15631 228 aaKnown RBP2.73□□□□□ -1.97
VPS13D-207ENST00000476169 FAM104BQ5XKR9 115 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 LRP11Q86VZ4 500 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 SGPP2Q8IWX5 399 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 SMIM20Q8N5G0 67 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 OR11G2Q8NGC1 345 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 RMI2Q96E14 147 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 RNF5Q99942 180 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 ZNF286AQ9HBT8 521 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 C19orf12Q9NSK7 152 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 RSL24D1Q9UHA3 163 aaKnown RBP2.73□□□□□ -1.97
VPS13D-207ENST00000476169 UFC1Q9Y3C8 167 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 TDRD6O60522 2096 aaKnown RBP2.73□□□□□ -1.97
VPS13D-207ENST00000476169 COL5A3P25940 1745 aaPredicted RBP2.73□□□□□ -1.97
VPS13D-207ENST00000476169 ZNF831Q5JPB2 1677 aa2.73□□□□□ -1.97
VPS13D-207ENST00000476169 SBF2Q86WG5 1849 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 UBR2Q8IWV8 1755 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 IGHV1-69-2A0A0G2JMI3 117 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 LOC105371267A0A1B0GV96 52 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 hADV38S2A0JD32 116 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 SSC5DA1L4H1 1573 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms