RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 MAP1LC3BQ9GZQ8 125 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 WDR61Q9GZS3 305 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 GAL3ST2Q9H3Q3 398 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 HEYLQ9NQ87 328 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 SIRT7Q9NRC8 400 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 CALYQ9NYX4 217 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 VAX2Q9UIW0 290 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 GAB2Q9UQC2 676 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 FAM215AQ9Y5M1 114 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF407Q9C0G0 2248 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 IGLV3-9A0A075B6K5 115 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 IGKV1D-17A0A075B6S4 117 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 TRAV38-1A0A0B4J264 116 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 CTXND1A0A1B0GTU2 59 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 ZFP92A6NM28 416 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 C17orf98A8MV24 154 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 DEFB108AA8MXU0 73 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 FAM157AC9JC47 383 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 H3BQ15 152 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 PPIHO43447 177 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF737O75373 536 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 NDUFS6O75380 124 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 MT-CO2P00403 227 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 RAB5AP20339 215 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 NFYBP25208 207 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 DUTP33316 252 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 ELLP55199 621 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 GNB2P62879 340 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 NKX6-1P78426 367 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 MORN2Q502X0 79 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 PDLIM3Q53GG5 364 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 SMUG1Q53HV7 270 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF474Q6S9Z5 364 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 LCN15Q6UWW0 184 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 RBMXL3Q8N7X1 1067 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 OR10A7Q8NGE5 316 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 OR52E5Q8NH55 327 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 CLDND2Q8NHS1 167 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 RFESDQ8TAC1 157 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 NANPQ8TBE9 248 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 MBD3L1Q8WWY6 194 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 SDSLQ96GA7 329 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 OR4C12Q96R67 309 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 RSG1Q9BU20 258 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 ESRP2Q9H6T0 727 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 PRNDQ9UKY0 176 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 DNAJC13O75165 2243 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 CEP250Q9BV73 2442 aa4.86□□□□□ -1.63
ATPAF1-204ENST00000474020 IGHV3OR15-7A0A075B7D8 119 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 KBTBD11-OT1A0A1B0GTJ5 212 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 A0A1W2PPV4 95 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 SMCO3A2RU48 225 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 A8MXE2 369 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 C9JQL5 133 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 C15orf65H3BRN8 121 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 RAMP3O60896 148 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 IGHV1-46P01743 117 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 APOA2P02652 100 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 S100A8P05109 93 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 CRYBA1P05813 215 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 SRP19P09132 144 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 P0C879 139 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 DAOP14920 347 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 NDUFB7P17568 137 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 EGR1P18146 543 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 S100PP25815 95 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 UCNP55089 124 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 ATP5IP56385 69 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 MRPS11P82912 194 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 MEF2CQ06413 473 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 EIF4EBP1Q13541 118 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 PMS2P11Q13670 270 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 IZUMO4Q1ZYL8 232 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 FFAR4Q5NUL3 377 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 SPSB3Q6PJ21 355 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 SEM1Q6ZVN7 128 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 CENPVQ7Z7K6 275 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF575Q86XF7 245 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 IQCF2Q8IXL9 164 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 TPRX1Q8N7U7 411 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 OR10G9Q8NGN4 311 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 OR10G7Q8NGN6 311 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 FAM222BQ8WU58 562 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 BTF3L4Q96K17 158 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 OR5B12Q96R08 314 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 RARRES2Q99969 163 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 C20orf24Q9BUV8 137 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 CTDSP1Q9GZU7 261 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 DYNLRB1Q9NP97 96 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 RPRMQ9NS64 109 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 FKBP11Q9NYL4 201 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 IDI2-AS1Q9NZ38 188 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 CLN8Q9UBY8 286 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 TP53TG5Q9Y2B4 290 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 PCNX2A6NKB5 2137 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 MED13Q9UHV7 2174 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 RTTNQ86VV8 2226 aa4.85□□□□□ -1.63
ATPAF1-204ENST00000474020 EP300Q09472 2414 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 FREM1Q5H8C1 2179 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 TRGV8A0A0C4DH27 118 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms