RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ZNF324O75467 553 aaPredicted RBP11.49□□□□□ -0.57
NPHP4-207ENST00000470763 GLB1P16278 677 aa11.49□□□□□ -0.57
NPHP4-207ENST00000470763 VWC2Q2TAL6 325 aa11.49□□□□□ -0.57
NPHP4-207ENST00000470763 GMPPAQ96IJ6 420 aaPredicted RBP11.49□□□□□ -0.57
NPHP4-207ENST00000470763 BET1LQ9NYM9 111 aa11.49□□□□□ -0.57
NPHP4-207ENST00000470763 SPTBN2O15020 2390 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 IGHV2OR16-5A0A0B4J2B6 119 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 C15orf62A8K5M9 175 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 NPIPB11E5RHQ5 1161 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 NXPH2O95156 264 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 FOXG1P55316 489 aaPredicted RBP11.48□□□□□ -0.57
NPHP4-207ENST00000470763 MRPL54Q6P161 138 aaKnown RBP11.48□□□□□ -0.57
NPHP4-207ENST00000470763 TCTEX1D1Q8N7M0 179 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 SSMEM1Q8WWF3 244 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 SFXN3Q9BWM7 321 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 WDR83OSQ9Y284 106 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 DOCK10Q96BY6 2186 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 URB1O60287 2271 aaKnown RBP11.48□□□□□ -0.57
NPHP4-207ENST00000470763 ZNF503-AS2A6NEH8 195 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 A8MXE2 369 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 H2BFWTQ7Z2G1 175 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 TSTD1Q8NFU3 115 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 LOXL4Q96JB6 756 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 SLC35D1Q9NTN3 355 aa11.48□□□□□ -0.57
NPHP4-207ENST00000470763 TNRC6AQ8NDV7 1962 aaKnown RBP11.48□□□□□ -0.57
NPHP4-207ENST00000470763 RNF212BA8MTL3 300 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 PRRX1P54821 245 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 BRWD1-AS2P59051 145 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 PDLIM3Q53GG5 364 aaPredicted RBP11.47□□□□□ -0.57
NPHP4-207ENST00000470763 SPATA31B1PQ5VZV4 182 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 DOLPP1Q86YN1 238 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 SLC25A45Q8N413 288 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 KLHDC1Q8N7A1 406 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 OR10D3Q8NH80 312 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 RAB1CQ92928 201 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 RNASE7Q9H1E1 156 aaKnown RBP11.47□□□□□ -0.57
NPHP4-207ENST00000470763 V9GYV3 84 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 HCFC1P51610 2035 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 ASPMQ8IZT6 3477 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 OR2H2O95918 312 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 CA2P00918 260 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 P0C879 139 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 STAG3L2P0CL84 134 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 STAG3L3P0CL85 134 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 OTX2P32243 289 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 ARF1P84077 181 aaKnown RBP11.47□□□□□ -0.57
NPHP4-207ENST00000470763 VAMP3Q15836 100 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 GGNQ86UU5 652 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 EAF1Q96JC9 268 aaPredicted RBP11.47□□□□□ -0.57
NPHP4-207ENST00000470763 SPOCK3Q9BQ16 436 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 VPS25Q9BRG1 176 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 GNB1LQ9BYB4 327 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 NCOR2Q9Y618 2525 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 ASPHD1Q5U4P2 390 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 Q6P435 159 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 BORCS7Q96B45 105 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 CLEC7AQ9BXN2 247 aa11.47□□□□□ -0.57
NPHP4-207ENST00000470763 TRAV9-1A0A075B6T8 112 aa11.46□□□□□ -0.57
NPHP4-207ENST00000470763 IGHV2-70DA0A0C4DH43 119 aa11.46□□□□□ -0.57
NPHP4-207ENST00000470763 NXPH1P58417 271 aa11.46□□□□□ -0.57
NPHP4-207ENST00000470763 PCOLCEQ15113 449 aa11.46□□□□□ -0.57
NPHP4-207ENST00000470763 IFI44Q8TCB0 444 aa11.46□□□□□ -0.57
NPHP4-207ENST00000470763 FSCN3Q9NQT6 498 aa11.46□□□□□ -0.57
NPHP4-207ENST00000470763 RARRES3Q9UL19 164 aa11.46□□□□□ -0.57
NPHP4-207ENST00000470763 TNRC6BQ9UPQ9 1833 aaKnown RBP11.46□□□□□ -0.58
NPHP4-207ENST00000470763 GJE1A6NN92 205 aa11.46□□□□□ -0.58
NPHP4-207ENST00000470763 FOXH1O75593 365 aa11.46□□□□□ -0.58
NPHP4-207ENST00000470763 CXorf1O96002 111 aa11.46□□□□□ -0.58
NPHP4-207ENST00000470763 CEBPDP49716 269 aaPredicted RBP11.46□□□□□ -0.58
NPHP4-207ENST00000470763 RELBQ01201 579 aa11.46□□□□□ -0.58
NPHP4-207ENST00000470763 ZNF718Q3SXZ3 478 aa11.46□□□□□ -0.58
NPHP4-207ENST00000470763 SPATA46Q5T0L3 261 aa11.46□□□□□ -0.58
NPHP4-207ENST00000470763 STUMQ69YW2 141 aa11.46□□□□□ -0.58
NPHP4-207ENST00000470763 ZNF497Q6ZNH5 498 aa11.46□□□□□ -0.58
NPHP4-207ENST00000470763 TMEM136Q6ZRR5 245 aa11.46□□□□□ -0.58
NPHP4-207ENST00000470763 LINC00596Q86U02 117 aa11.46□□□□□ -0.58
NPHP4-207ENST00000470763 ZNF645Q8N7E2 425 aa11.46□□□□□ -0.58
NPHP4-207ENST00000470763 OR52L2PQ8NGH6 319 aa11.46□□□□□ -0.58
NPHP4-207ENST00000470763 TSKUQ8WUA8 353 aa11.46□□□□□ -0.58
NPHP4-207ENST00000470763 FAM166BA8MTA8 275 aa11.45□□□□□ -0.58
NPHP4-207ENST00000470763 BMPR1BO00238 502 aa11.45□□□□□ -0.58
NPHP4-207ENST00000470763 NEURL1O76050 574 aa11.45□□□□□ -0.58
NPHP4-207ENST00000470763 RFPL3SP0C7P2 107 aa11.45□□□□□ -0.58
NPHP4-207ENST00000470763 TNFSF4P23510 183 aa11.45□□□□□ -0.58
NPHP4-207ENST00000470763 B3GALT5-AS1P59052 145 aa11.45□□□□□ -0.58
NPHP4-207ENST00000470763 Q56UQ5 140 aa11.45□□□□□ -0.58
NPHP4-207ENST00000470763 WIPI1Q5MNZ9 446 aaPredicted RBP11.45□□□□□ -0.58
NPHP4-207ENST00000470763 TREML4Q6UXN2 200 aa11.45□□□□□ -0.58
NPHP4-207ENST00000470763 ST6GALNAC6Q969X2 333 aa11.45□□□□□ -0.58
NPHP4-207ENST00000470763 SEPSECSQ9HD40 501 aaKnown RBP11.45□□□□□ -0.58
NPHP4-207ENST00000470763 LOC102724200A0A096LPH7 203 aaPredicted RBP11.45□□□□□ -0.58
NPHP4-207ENST00000470763 MMP23AO75900 390 aa11.45□□□□□ -0.58
NPHP4-207ENST00000470763 SSR4P51571 173 aa11.45□□□□□ -0.58
NPHP4-207ENST00000470763 OR10J3Q5JRS4 329 aa11.45□□□□□ -0.58
NPHP4-207ENST00000470763 LDLRAD2Q5SZI1 272 aa11.45□□□□□ -0.58
NPHP4-207ENST00000470763 MGST2Q99735 147 aa11.45□□□□□ -0.58
NPHP4-207ENST00000470763 ANKRD30BLA7E2S9 258 aa11.44□□□□□ -0.58
NPHP4-207ENST00000470763 RAC2P15153 192 aa11.44□□□□□ -0.58
NPHP4-207ENST00000470763 GCHFRP30047 84 aa11.44□□□□□ -0.58
NPHP4-207ENST00000470763 GNG3P63215 75 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms