RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 ZNF678Q5SXM1 525 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 AKR1C8PQ5T2L2 129 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 ZNF684Q5T5D7 378 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 C9orf64Q5T6V5 341 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 SMARCD3Q6STE5 483 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 OPN5Q6U736 354 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 SCGB1D4Q6XE38 83 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 CYHR1Q6ZMK1 362 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 TIFABQ6ZNK6 161 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 HMGN2P46Q86SG4 172 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 CROCCP2Q86T23 111 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 UBALD2Q8IYN6 164 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 DEFB107AQ8IZN7 70 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 ZNF561Q8N587 486 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR52N1Q8NH53 320 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR10D3Q8NH80 312 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR5K1Q8NHB7 308 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 CCL4L1Q8NHW4 92 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 GRPEL2Q8TAA5 225 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 TWIST2Q8WVJ9 160 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 EXOSC8Q96B26 276 aaKnown RBP2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 SMIM8Q96KF7 97 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 TEX37Q96LM6 180 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 ZNF717Q9BY31 904 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 CHST5Q9GZS9 411 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 EIF5A2Q9GZV4 153 aaKnown RBP2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 DCSTAMPQ9H295 470 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 TCEAL2Q9H3H9 227 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 NOX3Q9HBY0 568 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 TMEM138Q9NPI0 162 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 CCDC167Q9P0B6 97 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 SLC23A2Q9UGH3 650 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 SMPXQ9UHP9 88 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 USP34Q70CQ2 3546 aa2.59□□□□□ -1.99
HMGB1P25-201ENST00000468402 HEATR5AQ86XA9 2040 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 IGHV3-66A0A0C4DH42 116 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 C5orf49A4QMS7 147 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 ZNF705GA8MUZ8 300 aaPredicted RBP2.58□□□□□ -2
HMGB1P25-201ENST00000468402 LOC730098B7Z3J9 87 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 E7EQ34 232 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 C5orf67F2Z3F1 127 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 TMX2-CTNND1H3BSU7 103 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 SLC17A3O00476 420 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 PDE6DO43924 150 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 WISP3O95389 354 aaPredicted RBP2.58□□□□□ -2
HMGB1P25-201ENST00000468402 CPSF4O95639 269 aaKnown RBP2.58□□□□□ -2
HMGB1P25-201ENST00000468402 PDYNP01213 254 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 OR10J4P0C629 311 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 NBEAP1P0C6P0 100 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 ADRB3P13945 408 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 GABRA1P14867 456 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 OGNP20774 298 aaKnown RBP2.58□□□□□ -2
HMGB1P25-201ENST00000468402 CXCR1P25024 350 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 SLC6A1P30531 599 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 PRSS3P35030 304 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 SRP9P49458 86 aaKnown RBP2.58□□□□□ -2
HMGB1P25-201ENST00000468402 H2BFSP57053 126 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 RAB5BP61020 215 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 AP1S1P61966 158 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 RPL38P63173 70 aaKnown RBP2.58□□□□□ -2
HMGB1P25-201ENST00000468402 HPCAP84074 193 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 NDPQ00604 133 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 EMX1Q04741 257 aaPredicted RBP2.58□□□□□ -2
HMGB1P25-201ENST00000468402 ZNF239Q16600 458 aaKnown RBP2.58□□□□□ -2
HMGB1P25-201ENST00000468402 ACOT6Q3I5F7 207 aaPredicted RBP2.58□□□□□ -2
HMGB1P25-201ENST00000468402 TRMT12Q53H54 448 aaKnown RBP2.58□□□□□ -2
HMGB1P25-201ENST00000468402 CENPWQ5EE01 88 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 FAM78BQ5VT40 261 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 PCP2Q8IVA1 136 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 KRTCAP2Q8N6L1 136 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 LINC00612Q8N6U2 182 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 OR1L8Q8NGR8 309 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 OR1J4Q8NGS1 313 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 OR2K2Q8NGT1 345 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 PATE1Q8WXA2 126 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 GHSRQ92847 366 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 PTX4Q96A99 478 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 MRPL48Q96GC5 212 aaKnown RBP2.58□□□□□ -2
HMGB1P25-201ENST00000468402 DIRAS2Q96HU8 199 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 SLC35E1Q96K37 410 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 SLC35G5Q96KT7 338 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 CNBD2Q96M20 576 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 ZNF382Q96SR6 550 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 PFDN5Q99471 154 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 MRPL57Q9BQC6 102 aaKnown RBP2.58□□□□□ -2
HMGB1P25-201ENST00000468402 TMEM70Q9BUB7 260 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 MED18Q9BUE0 208 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 SFXN3Q9BWM7 321 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 SAR1AQ9NR31 198 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 RBFOX1Q9NWB1 397 aaKnown RBP2.58□□□□□ -2
HMGB1P25-201ENST00000468402 SPANXCQ9NY87 97 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 PCTPQ9UKL6 214 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 SIGLEC7Q9Y286 467 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 INSIG2Q9Y5U4 225 aa2.58□□□□□ -2
HMGB1P25-201ENST00000468402 COL6A3P12111 3177 aa2.57□□□□□ -2
HMGB1P25-201ENST00000468402 TRBV6-6A0A0A6YYG2 114 aa2.57□□□□□ -2
HMGB1P25-201ENST00000468402 IGHV5-51A0A0C4DH38 117 aa2.57□□□□□ -2
HMGB1P25-201ENST00000468402 OR4C46A6NHA9 309 aa2.57□□□□□ -2
HMGB1P25-201ENST00000468402 CD300LBA8K4G0 201 aa2.57□□□□□ -2
HMGB1P25-201ENST00000468402 M0R1X1 148 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms