RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 C8orf88P0DMB2 117 aa12.88□□□□□ -0.35
HMGN1-209ENST00000463631 CD36P16671 472 aa12.88□□□□□ -0.35
HMGN1-209ENST00000463631 BMI1P35226 326 aa12.88□□□□□ -0.35
HMGN1-209ENST00000463631 RPL27AP46776 148 aaKnown RBP12.88□□□□□ -0.35
HMGN1-209ENST00000463631 EWSR1Q01844 656 aaKnown RBP eCLIP12.88□□□□□ -0.35
HMGN1-209ENST00000463631 OGFRL1Q5TC84 451 aaPredicted RBP12.88□□□□□ -0.35
HMGN1-209ENST00000463631 CLEC19AQ6UXS0 136 aa12.88□□□□□ -0.35
HMGN1-209ENST00000463631 C19orf35Q6ZS72 473 aa12.88□□□□□ -0.35
HMGN1-209ENST00000463631 LYG2Q86SG7 212 aa12.88□□□□□ -0.35
HMGN1-209ENST00000463631 FYTTD1Q96QD9 318 aaKnown RBP12.88□□□□□ -0.35
HMGN1-209ENST00000463631 DPPA5A6NC42 116 aa12.87□□□□□ -0.35
HMGN1-209ENST00000463631 SLC22A5O76082 557 aa12.87□□□□□ -0.35
HMGN1-209ENST00000463631 SCAF4O95104 1147 aaKnown RBP12.87□□□□□ -0.35
HMGN1-209ENST00000463631 RAB6AP20340 208 aa12.87□□□□□ -0.35
HMGN1-209ENST00000463631 GALP22466 123 aa12.87□□□□□ -0.35
HMGN1-209ENST00000463631 PSMB6P28072 239 aa12.87□□□□□ -0.35
HMGN1-209ENST00000463631 APOC4P55056 127 aa12.87□□□□□ -0.35
HMGN1-209ENST00000463631 TM4SF20Q53R12 229 aa12.87□□□□□ -0.35
HMGN1-209ENST00000463631 BTNL8Q6UX41 500 aa12.87□□□□□ -0.35
HMGN1-209ENST00000463631 PUSL1Q8N0Z8 303 aaKnown RBP12.87□□□□□ -0.35
HMGN1-209ENST00000463631 OR1L6Q8NGR2 347 aa12.87□□□□□ -0.35
HMGN1-209ENST00000463631 OR4S2Q8NH73 311 aa12.87□□□□□ -0.35
HMGN1-209ENST00000463631 EEF1AKMT3Q96AZ1 226 aa12.87□□□□□ -0.35
HMGN1-209ENST00000463631 OR2A7Q96R45 310 aa12.87□□□□□ -0.35
HMGN1-209ENST00000463631 DCUN1D5Q9BTE7 237 aa12.87□□□□□ -0.35
HMGN1-209ENST00000463631 RBMX2Q9Y388 322 aaKnown RBP12.87□□□□□ -0.35
HMGN1-209ENST00000463631 DNAH10Q8IVF4 4471 aa12.87□□□□□ -0.35
HMGN1-209ENST00000463631 ZNF320A2RRD8 509 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 E7EUB6 86 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 CASQ2O14958 399 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-209ENST00000463631 IGLV2-14P01704 120 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 HLA-DQB1P01920 261 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 AREGP15514 252 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 HIST1H1BP16401 226 aaKnown RBP12.86□□□□□ -0.35
HMGN1-209ENST00000463631 CTRB1P17538 263 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 DTYMKP23919 212 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 ELLP55199 621 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-209ENST00000463631 RPL30P62888 115 aaKnown RBP12.86□□□□□ -0.35
HMGN1-209ENST00000463631 FABP5Q01469 135 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 MLLT11Q13015 90 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-209ENST00000463631 RCN1Q15293 331 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 HES5Q5TA89 166 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 CTRB2Q6GPI1 263 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 VKORC1L1Q8N0U8 176 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 ACOT13Q9NPJ3 140 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 SCN3BQ9NY72 215 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 KLK5Q9Y337 293 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-209ENST00000463631 OR2W1Q9Y3N9 320 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 SELENOKQ9Y6D0 94 aa12.86□□□□□ -0.35
HMGN1-209ENST00000463631 IGLV11-55A0A075B6I3 123 aa12.85□□□□□ -0.35
HMGN1-209ENST00000463631 A0A075B6Q4 140 aa12.85□□□□□ -0.35
HMGN1-209ENST00000463631 TRBV7-1A0A0A6YYK4 115 aa12.85□□□□□ -0.35
HMGN1-209ENST00000463631 UBE2CO00762 179 aa12.85□□□□□ -0.35
HMGN1-209ENST00000463631 SPRY2O43597 315 aa12.85□□□□□ -0.35
HMGN1-209ENST00000463631 IGHV3-23P01764 117 aa12.85□□□□□ -0.35
HMGN1-209ENST00000463631 CTXN2P0C2S0 81 aa12.85□□□□□ -0.35
HMGN1-209ENST00000463631 HSMCR30P0CW71 290 aa12.85□□□□□ -0.35
HMGN1-209ENST00000463631 TALDO1P37837 337 aa12.85□□□□□ -0.35
HMGN1-209ENST00000463631 EIF4EBP1Q13541 118 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-209ENST00000463631 ARL6IP1Q15041 203 aa12.85□□□□□ -0.35
HMGN1-209ENST00000463631 CXorf58Q96LI9 332 aa12.85□□□□□ -0.35
HMGN1-209ENST00000463631 HSD17B10Q99714 261 aaKnown RBP12.85□□□□□ -0.35
HMGN1-209ENST00000463631 SPAG8Q99932 426 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-209ENST00000463631 MRPL27Q9P0M9 148 aaKnown RBP12.85□□□□□ -0.35
HMGN1-209ENST00000463631 S4R3C0 116 aa12.85□□□□□ -0.35
HMGN1-209ENST00000463631 KIR2DL5BA0A0G2JN68 375 aa12.84□□□□□ -0.35
HMGN1-209ENST00000463631 KIR2DL5BA0A0G2JPC4 375 aa12.84□□□□□ -0.35
HMGN1-209ENST00000463631 IFITM5A6NNB3 132 aa12.84□□□□□ -0.35
HMGN1-209ENST00000463631 DEFB135Q30KP9 77 aa12.84□□□□□ -0.35
HMGN1-209ENST00000463631 OR2B11Q5JQS5 317 aa12.84□□□□□ -0.35
HMGN1-209ENST00000463631 UNQ9165/PRO28630Q6UXU0 137 aa12.84□□□□□ -0.35
HMGN1-209ENST00000463631 RBPMS2Q6ZRY4 209 aaKnown RBP12.84□□□□□ -0.35
HMGN1-209ENST00000463631 KIR2DL5AQ8N109 375 aa12.84□□□□□ -0.35
HMGN1-209ENST00000463631 RPP25LQ8N5L8 163 aaKnown RBP12.84□□□□□ -0.35
HMGN1-209ENST00000463631 KIR2DL5BQ8NHK3 375 aa12.84□□□□□ -0.35
HMGN1-209ENST00000463631 DUSP21Q9H596 190 aa12.84□□□□□ -0.35
HMGN1-209ENST00000463631 C5orf66Q9H5L9 145 aa12.84□□□□□ -0.35
HMGN1-209ENST00000463631 TRAV1-2A0A0B4J238 106 aa12.83□□□□□ -0.36
HMGN1-209ENST00000463631 METTL21EPA6NDL7 271 aa12.83□□□□□ -0.36
HMGN1-209ENST00000463631 MFSD2BA6NFX1 497 aa12.83□□□□□ -0.36
HMGN1-209ENST00000463631 BRWD1-AS2P59051 145 aa12.83□□□□□ -0.36
HMGN1-209ENST00000463631 RPL8P62917 257 aaKnown RBP12.83□□□□□ -0.36
HMGN1-209ENST00000463631 SLC38A6Q8IZM9 456 aa12.83□□□□□ -0.36
HMGN1-209ENST00000463631 OR2C3Q8N628 320 aa12.83□□□□□ -0.36
HMGN1-209ENST00000463631 TMEM217Q8N7C4 229 aa12.83□□□□□ -0.36
HMGN1-209ENST00000463631 RNF183Q96D59 192 aa12.83□□□□□ -0.36
HMGN1-209ENST00000463631 VCXQ9H320 206 aa12.83□□□□□ -0.36
HMGN1-209ENST00000463631 UFC1Q9Y3C8 167 aa12.83□□□□□ -0.36
HMGN1-209ENST00000463631 IGKV1D-13A0A0B4J2D9 117 aa12.82□□□□□ -0.36
HMGN1-209ENST00000463631 EBAG9O00559 213 aa12.82□□□□□ -0.36
HMGN1-209ENST00000463631 PDCD5O14737 125 aa12.82□□□□□ -0.36
HMGN1-209ENST00000463631 CLEC3BP05452 202 aa12.82□□□□□ -0.36
HMGN1-209ENST00000463631 IGKV1-13P0DP09 117 aa12.82□□□□□ -0.36
HMGN1-209ENST00000463631 MYOD1P15172 320 aa12.82□□□□□ -0.36
HMGN1-209ENST00000463631 NFYAP23511 347 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-209ENST00000463631 LGALS9CQ6DKI2 356 aa12.82□□□□□ -0.36
HMGN1-209ENST00000463631 ZNF502Q8TBZ5 544 aa12.82□□□□□ -0.36
HMGN1-209ENST00000463631 TCTEX1D2Q8WW35 142 aa12.82□□□□□ -0.36
HMGN1-209ENST00000463631 MGLLQ99685 303 aa12.82□□□□□ -0.36
HMGN1-209ENST00000463631 DCSTAMPQ9H295 470 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms