RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 FOXG1P55316 489 aaPredicted RBP13.76□□□□□ -0.21
LSS-205ENST00000457828 SEBOXQ9HB31 216 aaPredicted RBP13.76□□□□□ -0.21
LSS-205ENST00000457828 SNURFLB1AK76 121 aa13.75□□□□□ -0.21
LSS-205ENST00000457828 CD1BP29016 333 aa13.75□□□□□ -0.21
LSS-205ENST00000457828 OR10J1P30954 320 aa13.75□□□□□ -0.21
LSS-205ENST00000457828 HIST3H3Q16695 136 aa13.75□□□□□ -0.21
LSS-205ENST00000457828 OR4P4Q8NGL7 312 aa13.75□□□□□ -0.21
LSS-205ENST00000457828 RANBP2P49792 3224 aaKnown RBP13.75□□□□□ -0.21
LSS-205ENST00000457828 DOCK10Q96BY6 2186 aa13.75□□□□□ -0.21
LSS-205ENST00000457828 ACSM6Q6P461 480 aa13.75□□□□□ -0.21
LSS-205ENST00000457828 RPEQ96AT9 228 aa13.75□□□□□ -0.21
LSS-205ENST00000457828 ACY3Q96HD9 319 aa13.75□□□□□ -0.21
LSS-205ENST00000457828 GAL3ST2Q9H3Q3 398 aa13.75□□□□□ -0.21
LSS-205ENST00000457828 OR6C3Q9NZP0 311 aa13.75□□□□□ -0.21
LSS-205ENST00000457828 ANKHD1Q8IWZ3 2542 aaKnown RBP13.75□□□□□ -0.21
LSS-205ENST00000457828 TMEM50AO95807 157 aa13.75□□□□□ -0.21
LSS-205ENST00000457828 SNRPCP09234 159 aaKnown RBP13.75□□□□□ -0.21
LSS-205ENST00000457828 GLRXP35754 106 aa13.75□□□□□ -0.21
LSS-205ENST00000457828 NAGKQ9UJ70 344 aa13.75□□□□□ -0.21
LSS-205ENST00000457828 TMEM210A6NLX4 147 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 PDE6DO43924 150 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 HBZP02008 142 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 CELA3BP08861 270 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 OTX1P32242 354 aaPredicted RBP13.74□□□□□ -0.21
LSS-205ENST00000457828 GNG4P50150 75 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 RPL23P62829 140 aaKnown RBP13.74□□□□□ -0.21
LSS-205ENST00000457828 GABRA6Q16445 453 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 RTL8BQ17RB0 113 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 CDPF1Q6NVV7 123 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 LSM10Q969L4 123 aaKnown RBP13.74□□□□□ -0.21
LSS-205ENST00000457828 HSPB9Q9BQS6 159 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 DENND4AQ7Z401 1863 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 HSBP1L1C9JCN9 74 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 SS18L1O75177 396 aaPredicted RBP13.74□□□□□ -0.21
LSS-205ENST00000457828 HSBP1O75506 76 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 NMSQ5H8A3 153 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 OR5AU1Q8NGC0 362 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 OR51G1Q8NGK1 321 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 GATAD1Q8WUU5 269 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 CCL13Q99616 98 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 REPIN1Q9BWE0 567 aaKnown RBP13.74□□□□□ -0.21
LSS-205ENST00000457828 LAMA3Q16787 3333 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 A0A0G2JRQ6 117 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 CLDN14O95500 239 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 TFF3Q07654 80 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 LINC00596Q86U02 117 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 HSD17B10Q99714 261 aaKnown RBP13.74□□□□□ -0.21
LSS-205ENST00000457828 OOEPA6NGQ2 149 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 ZNF253O75346 499 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 MRPL54Q6P161 138 aaKnown RBP13.74□□□□□ -0.21
LSS-205ENST00000457828 TMEM68Q96MH6 324 aa13.74□□□□□ -0.21
LSS-205ENST00000457828 TMEM250H0YL14 139 aa13.73□□□□□ -0.21
LSS-205ENST00000457828 RHOBP62745 196 aa13.73□□□□□ -0.21
LSS-205ENST00000457828 C1orf162Q8NEQ5 155 aaPredicted RBP13.73□□□□□ -0.21
LSS-205ENST00000457828 DAZAP1Q96EP5 407 aaKnown RBP13.73□□□□□ -0.21
LSS-205ENST00000457828 HS3ST6Q96QI5 342 aa13.73□□□□□ -0.21
LSS-205ENST00000457828 OR5G3P0C626 314 aa13.73□□□□□ -0.21
LSS-205ENST00000457828 HNRNPA3P51991 378 aaKnown RBP13.73□□□□□ -0.21
LSS-205ENST00000457828 TAS2R60P59551 318 aa13.73□□□□□ -0.21
LSS-205ENST00000457828 OR5I1Q13606 314 aa13.73□□□□□ -0.21
LSS-205ENST00000457828 RSPO1Q2MKA7 263 aaPredicted RBP13.73□□□□□ -0.21
LSS-205ENST00000457828 OR1L6Q8NGR2 347 aa13.73□□□□□ -0.21
LSS-205ENST00000457828 C14orf144Q96I85 54 aa13.73□□□□□ -0.21
LSS-205ENST00000457828 AP1S3Q96PC3 154 aa13.73□□□□□ -0.21
LSS-205ENST00000457828 C1QTNF5Q9BXJ0 243 aa13.73□□□□□ -0.21
LSS-205ENST00000457828 MIC13Q5XKP0 118 aa13.73□□□□□ -0.21
LSS-205ENST00000457828 SAXO1Q8IYX7 474 aa13.73□□□□□ -0.21
LSS-205ENST00000457828 DIRC2Q96SL1 478 aa13.73□□□□□ -0.21
LSS-205ENST00000457828 TIMP3P35625 211 aa13.72□□□□□ -0.21
LSS-205ENST00000457828 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.72□□□□□ -0.21
LSS-205ENST00000457828 A0A1W2PNU3 283 aaPredicted RBP13.72□□□□□ -0.21
LSS-205ENST00000457828 AMBPP02760 352 aa13.72□□□□□ -0.21
LSS-205ENST00000457828 RAB4AP20338 218 aa13.72□□□□□ -0.21
LSS-205ENST00000457828 KIR2DL2P43627 348 aaPredicted RBP13.72□□□□□ -0.21
LSS-205ENST00000457828 RPL31P62899 125 aaKnown RBP13.72□□□□□ -0.21
LSS-205ENST00000457828 PSG5Q15238 335 aa13.72□□□□□ -0.21
LSS-205ENST00000457828 C5orf42Q9H799 3197 aa13.72□□□□□ -0.21
LSS-205ENST00000457828 ODAMA1E959 279 aa13.72□□□□□ -0.21
LSS-205ENST00000457828 NCBP2LA6PVI3 153 aaKnown RBP13.72□□□□□ -0.21
LSS-205ENST00000457828 PRDX2P32119 198 aa13.72□□□□□ -0.21
LSS-205ENST00000457828 RANP62826 216 aaKnown RBP13.72□□□□□ -0.21
LSS-205ENST00000457828 WIPI2Q9Y4P8 454 aa13.72□□□□□ -0.21
LSS-205ENST00000457828 A0A1B0GW64 132 aa13.71□□□□□ -0.21
LSS-205ENST00000457828 PGPEP1LA6NFU8 196 aa13.71□□□□□ -0.21
LSS-205ENST00000457828 APOBEC3AP31941 199 aaPredicted RBP13.71□□□□□ -0.21
LSS-205ENST00000457828 TAS2R45P59539 299 aa13.71□□□□□ -0.21
LSS-205ENST00000457828 RPEL1Q2QD12 228 aa13.71□□□□□ -0.21
LSS-205ENST00000457828 TNFRSF19Q9NS68 423 aa13.71□□□□□ -0.21
LSS-205ENST00000457828 OR5B3Q8NH48 314 aa13.71□□□□□ -0.21
LSS-205ENST00000457828 OR5P3Q8WZ94 311 aa13.71□□□□□ -0.21
LSS-205ENST00000457828 PCDH15Q96QU1 1955 aa13.71□□□□□ -0.21
LSS-205ENST00000457828 IGHV2OR16-5A0A0B4J2B6 119 aa13.71□□□□□ -0.21
LSS-205ENST00000457828 RNF151Q2KHN1 245 aa13.71□□□□□ -0.21
LSS-205ENST00000457828 CORO2AQ92828 525 aa13.71□□□□□ -0.21
LSS-205ENST00000457828 COMMD5Q9GZQ3 224 aa13.71□□□□□ -0.21
LSS-205ENST00000457828 PXMP4Q9Y6I8 212 aa13.71□□□□□ -0.21
LSS-205ENST00000457828 B9A039 149 aa13.71□□□□□ -0.22
LSS-205ENST00000457828 CBLN1P23435 193 aa13.71□□□□□ -0.22
LSS-205ENST00000457828 JOSD1Q15040 202 aaPredicted RBP13.71□□□□□ -0.22
LSS-205ENST00000457828 VKORC1L1Q8N0U8 176 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms