RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 CEACAM3P40198 252 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 RAB13P51153 203 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 ATP5J2P56134 94 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 ATP5IP56385 69 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 BRWD1-AS2P59051 145 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 RPL30P62888 115 aaKnown RBP3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 RPP30P78346 268 aaKnown RBP3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 TNFRSF9Q07011 255 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 BAXQ07812 192 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 ZNF816Q0VGE8 651 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 POU2AF1Q16633 256 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 RNF151Q2KHN1 245 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 AARDQ4LEZ3 155 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 MIDNQ504T8 468 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 OR2B11Q5JQS5 317 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 CXorf66Q5JRM2 361 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 LCE3BQ5TA77 95 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 FAM53AQ6NSI3 398 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 CLEC2AQ6UVW9 174 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 STX12Q86Y82 276 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 PDPNQ86YL7 162 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 TGIF2LXQ8IUE1 241 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 ODF3L1Q8IXM7 274 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 C11orf42Q8N5U0 333 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 OR2C3Q8N628 320 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 ZNF680Q8NEM1 530 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 OR11H6Q8NGC7 330 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 OR52E5Q8NH55 327 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 STOML3Q8TAV4 291 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 OSR1Q8TAX0 266 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 LRRC20Q8TCA0 184 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 SCARB1Q8WTV0 552 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 LEAP2Q969E1 77 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 LHX4Q969G2 390 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 ST6GALNAC6Q969X2 333 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 CIB3Q96Q77 187 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 ZNF251Q9BRH9 671 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 PIMREGQ9BSJ6 248 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 ZNF471Q9BX82 626 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 UNKLQ9H9P5 680 aaKnown RBP3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 LYRM2Q9NU23 88 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 FKBP11Q9NYL4 201 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 ONECUT1Q9UBC0 465 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 HSPB7Q9UBY9 170 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 UBQLN2Q9UHD9 624 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 RCL1Q9Y2P8 373 aaKnown RBP3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 KPTNQ9Y664 436 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 ITPR2Q14571 2701 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 POLQO75417 2590 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 ARHGAP32A7KAX9 2087 aa3.23□□□□□ -1.89
HMGB1P37-201ENST00000439613 TEX15Q9BXT5 2789 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 TNCP24821 2201 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 MED13LQ71F56 2210 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 IGHV2-26A0A0B4J1V2 119 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 A0A0G2JRQ6 117 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 CEBPZOSA8MTT3 80 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 OOSP1A8MZH6 123 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 BUB1B-PAK6H3BSN5 160 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 H7C2Y5 167 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 NDUFS7O75251 213 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 DFFBO76075 338 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 CRYZL1O95825 349 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 IFNA17P01571 189 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 IGLV1-47P01700 117 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 FGF2P09038 288 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 RNF224P0DH78 156 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 CT45A6P0DMU7 189 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 CT45A5P0DMU8 189 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 CT45A7P0DMV0 189 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 SLC25A16P16260 332 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 HTR1DP28221 377 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 LGALS7P47929 136 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 SULT1A1P50225 295 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 CAV2P51636 162 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 SPCS3P61009 180 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 UBE2KP61086 200 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 HSPE1P61604 102 aaKnown RBP3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 LMO4P61968 165 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 ARF6P62330 175 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 POLR2GP62487 172 aaKnown RBP eCLIP3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 HBG1P69891 147 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 HBG2P69892 147 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 EWSR1Q01844 656 aaKnown RBP eCLIP3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 CD69Q07108 199 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 SRSF1Q07955 248 aaKnown RBP eCLIP3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 EXOSC2Q13868 293 aaKnown RBP3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 ZNF266Q14584 549 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 ODF1Q14990 250 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 HLA-DRB5Q30154 266 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 PDLIM3Q53GG5 364 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 OR4A47Q6IF82 309 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 CCDC144NLQ6NUI1 221 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 Q6ZRM9 215 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 ZNF429Q86V71 674 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 BAP18Q8IXM2 172 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 OR8H3Q8N146 312 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 ZNF525Q8N782 197 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 ZNF383Q8NA42 475 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 UBAC2Q8NBM4 344 aa3.22□□□□□ -1.89
HMGB1P37-201ENST00000439613 OR4C13Q8NGP0 309 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms