RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 HCP5Q6MZN7 132 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 HAPLN4Q86UW8 402 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 PNKDQ8N490 385 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 OR1S2Q8NGQ3 325 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 C10orf105Q8TEF2 133 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 HARBI1Q96MB7 349 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 ATP5SQ99766 215 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 PRNDQ9UKY0 176 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 ZNF257Q9Y2Q1 563 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 POLR3KQ9Y2Y1 108 aaPredicted RBP12.3□□□□□ -0.44
ACTB-204ENST00000425660 FBN2P35556 2912 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 VPS13CQ709C8 3753 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 CEBPZOSA8MTT3 80 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 ODF3BA8MYP8 253 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 VWC2LB2RUY7 222 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 UPK2O00526 184 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 SAA1P0DJI8 122 aaPredicted RBP12.3□□□□□ -0.44
ACTB-204ENST00000425660 HBG1P69891 147 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 HBG2P69892 147 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 ARL16Q0P5N6 197 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 FAM168AQ92567 244 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 RBMXL1Q96E39 390 aaKnown RBP12.3□□□□□ -0.44
ACTB-204ENST00000425660 CXorf58Q96LI9 332 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 SIRT7Q9NRC8 400 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 IGHV1-3A0A0C4DH29 117 aa12.29□□□□□ -0.44
ACTB-204ENST00000425660 IGHV2-70DA0A0C4DH43 119 aa12.29□□□□□ -0.44
ACTB-204ENST00000425660 PMS2P5A8MQ11 134 aa12.29□□□□□ -0.44
ACTB-204ENST00000425660 FGF2P09038 288 aa12.29□□□□□ -0.44
ACTB-204ENST00000425660 COL8A1P27658 744 aa12.29□□□□□ -0.44
ACTB-204ENST00000425660 VDAC2P45880 294 aaPredicted RBP12.29□□□□□ -0.44
ACTB-204ENST00000425660 SULT1A2P50226 295 aa12.29□□□□□ -0.44
ACTB-204ENST00000425660 ATP5J2P56134 94 aa12.29□□□□□ -0.44
ACTB-204ENST00000425660 HSPE1P61604 102 aaKnown RBP12.29□□□□□ -0.44
ACTB-204ENST00000425660 PRB3Q04118 309 aaPredicted RBP12.29□□□□□ -0.44
ACTB-204ENST00000425660 VSTM2AQ8TAG5 236 aa12.29□□□□□ -0.44
ACTB-204ENST00000425660 OR4C12Q96R67 309 aa12.29□□□□□ -0.44
ACTB-204ENST00000425660 PIMREGQ9BSJ6 248 aa12.29□□□□□ -0.44
ACTB-204ENST00000425660 SIRPDQ9H106 197 aa12.29□□□□□ -0.44
ACTB-204ENST00000425660 TCF19Q9Y242 345 aa12.29□□□□□ -0.44
ACTB-204ENST00000425660 STRAPQ9Y3F4 350 aaKnown RBP12.29□□□□□ -0.44
ACTB-204ENST00000425660 DOPEY2Q9Y3R5 2298 aa12.29□□□□□ -0.44
ACTB-204ENST00000425660 FBXO24O75426 580 aa12.28□□□□□ -0.44
ACTB-204ENST00000425660 KBTBD11O94819 623 aa12.28□□□□□ -0.44
ACTB-204ENST00000425660 IGLV2-23P01705 113 aa12.28□□□□□ -0.44
ACTB-204ENST00000425660 LCN2P80188 198 aa12.28□□□□□ -0.44
ACTB-204ENST00000425660 LDLRAD2Q5SZI1 272 aa12.28□□□□□ -0.44
ACTB-204ENST00000425660 OR4A5Q8NH83 315 aa12.28□□□□□ -0.44
ACTB-204ENST00000425660 MS4A7Q9GZW8 240 aaPredicted RBP12.28□□□□□ -0.44
ACTB-204ENST00000425660 NUP50Q9UKX7 468 aa12.28□□□□□ -0.44
ACTB-204ENST00000425660 INSIG2Q9Y5U4 225 aa12.28□□□□□ -0.44
ACTB-204ENST00000425660 CSMD2Q7Z408 3487 aa12.28□□□□□ -0.44
ACTB-204ENST00000425660 USP9YO00507 2555 aaPredicted RBP12.28□□□□□ -0.44
ACTB-204ENST00000425660 FOXH1O75593 365 aa12.27□□□□□ -0.44
ACTB-204ENST00000425660 SCAF4O95104 1147 aaKnown RBP12.27□□□□□ -0.44
ACTB-204ENST00000425660 HTR1DP28221 377 aa12.27□□□□□ -0.44
ACTB-204ENST00000425660 LGALS7P47929 136 aa12.27□□□□□ -0.44
ACTB-204ENST00000425660 SPINK9Q5DT21 86 aa12.27□□□□□ -0.44
ACTB-204ENST00000425660 CLEC2AQ6UVW9 174 aa12.27□□□□□ -0.44
ACTB-204ENST00000425660 COMMD7Q86VX2 200 aa12.27□□□□□ -0.44
ACTB-204ENST00000425660 OR5B3Q8NH48 314 aa12.27□□□□□ -0.44
ACTB-204ENST00000425660 RPEQ96AT9 228 aa12.27□□□□□ -0.44
ACTB-204ENST00000425660 SAT2Q96F10 170 aaPredicted RBP12.27□□□□□ -0.44
ACTB-204ENST00000425660 TSNAXQ99598 290 aaKnown RBP12.27□□□□□ -0.44
ACTB-204ENST00000425660 MMP26Q9NRE1 261 aa12.27□□□□□ -0.44
ACTB-204ENST00000425660 FKBP11Q9NYL4 201 aa12.27□□□□□ -0.44
ACTB-204ENST00000425660 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.44
ACTB-204ENST00000425660 DPM3Q9P2X0 92 aa12.27□□□□□ -0.44
ACTB-204ENST00000425660 A0A1W2PPI3 338 aa12.27□□□□□ -0.45
ACTB-204ENST00000425660 C15orf62A8K5M9 175 aa12.27□□□□□ -0.45
ACTB-204ENST00000425660 USF1P22415 310 aaPredicted RBP12.27□□□□□ -0.45
ACTB-204ENST00000425660 VMO1Q7Z5L0 202 aa12.27□□□□□ -0.45
ACTB-204ENST00000425660 HSD17B11Q8NBQ5 300 aa12.27□□□□□ -0.45
ACTB-204ENST00000425660 TMEM167AQ8TBQ9 72 aa12.27□□□□□ -0.45
ACTB-204ENST00000425660 PARD6GQ9BYG4 376 aaPredicted RBP12.27□□□□□ -0.45
ACTB-204ENST00000425660 SH3BGRL3Q9H299 93 aa12.27□□□□□ -0.45
ACTB-204ENST00000425660 HIPK2Q9H2X6 1198 aa12.27□□□□□ -0.45
ACTB-204ENST00000425660 OR51B2Q9Y5P1 312 aa12.27□□□□□ -0.45
ACTB-204ENST00000425660 ATP6V0CP27449 155 aa12.26□□□□□ -0.45
ACTB-204ENST00000425660 RPS16P62249 146 aaKnown RBP12.26□□□□□ -0.45
ACTB-204ENST00000425660 RPP30P78346 268 aaKnown RBP12.26□□□□□ -0.45
ACTB-204ENST00000425660 HABP2Q14520 560 aaPredicted RBP12.26□□□□□ -0.45
ACTB-204ENST00000425660 TPTE2P1Q5T6R2 138 aa12.26□□□□□ -0.45
ACTB-204ENST00000425660 HIST2H2BCQ6DN03 193 aa12.26□□□□□ -0.45
ACTB-204ENST00000425660 GNPNAT1Q96EK6 184 aaPredicted RBP12.26□□□□□ -0.45
ACTB-204ENST00000425660 CITED4Q96RK1 184 aa12.26□□□□□ -0.45
ACTB-204ENST00000425660 REG4Q9BYZ8 158 aa12.26□□□□□ -0.45
ACTB-204ENST00000425660 SPG11Q96JI7 2443 aa12.26□□□□□ -0.45
ACTB-204ENST00000425660 ARHGAP32A7KAX9 2087 aa12.26□□□□□ -0.45
ACTB-204ENST00000425660 MFSD2BA6NFX1 497 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 RNASEK-C17orf49H0YIS7 233 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 CEACAM3P40198 252 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 RAB5CP51148 216 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 PRCDQ00LT1 54 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 SLC38A11Q08AI6 406 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 ATP6V1FQ16864 119 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 EIF4E3Q8N5X7 224 aaKnown RBP12.25□□□□□ -0.45
ACTB-204ENST00000425660 OR10P1Q8NGE3 313 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 PINX1Q96BK5 328 aaKnown RBP12.25□□□□□ -0.45
ACTB-204ENST00000425660 CLCC1Q96S66 551 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 PFDN2Q9UHV9 154 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms