RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 RBMX2Q9Y388 322 aaKnown RBP7.21□□□□□ -1.26
NUP50-205ENST00000419387 HUWE1Q7Z6Z7 4374 aaKnown RBP7.21□□□□□ -1.26
NUP50-205ENST00000419387 RYR3Q15413 4870 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 TRAV18A0A075B6X5 111 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 TRBV9A0A0B4J1U6 114 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 H0Y980 276 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 ZNF701M0R085 212 aaPredicted RBP7.2□□□□□ -1.26
NUP50-205ENST00000419387 CREBL2O60519 120 aaPredicted RBP7.2□□□□□ -1.26
NUP50-205ENST00000419387 RBMXL2O75526 392 aaKnown RBP7.2□□□□□ -1.26
NUP50-205ENST00000419387 TUSC2O75896 110 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 ACTL6BO94805 426 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 IGLV2-14P01704 120 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 TRBV12-3P01733 135 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 APOA1P02647 267 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 SAA1P0DJI8 122 aaPredicted RBP7.2□□□□□ -1.26
NUP50-205ENST00000419387 SYNJ2BPP57105 145 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 RPL30P62888 115 aaKnown RBP7.2□□□□□ -1.26
NUP50-205ENST00000419387 KCTD9Q7L273 389 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 MMD2Q8IY49 270 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 TTC9CQ8N5M4 171 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 SNAPC3Q92966 411 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 S100A16Q96FQ6 103 aaKnown RBP7.2□□□□□ -1.26
NUP50-205ENST00000419387 SPIN2AQ99865 258 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 SPIN2BQ9BPZ2 258 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 SOSTQ9BQB4 213 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 ANXA10Q9UJ72 324 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 MRPS7Q9Y2R9 242 aaKnown RBP7.2□□□□□ -1.26
NUP50-205ENST00000419387 NBEAL2Q6ZNJ1 2754 aa7.2□□□□□ -1.26
NUP50-205ENST00000419387 IGKV1D-13A0A0B4J2D9 117 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 A6NHS1 94 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 FAM223BA6NKX1 122 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 A8MZ25 164 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 PRH1P02810 166 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 CSN3P07498 182 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 IGHV4-30-4P0DP06 118 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 IGKV1-13P0DP09 117 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 RHOGP84095 191 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 ATP5G2Q06055 141 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 RPEL1Q2QD12 228 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 OR2B11Q5JQS5 317 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 ZNF66Q6ZN08 573 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 SLC25A42Q86VD7 318 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 LYSMD2Q8IV50 215 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 FAM223AQ8IWN6 122 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 SGPP2Q8IWX5 399 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 MFSD4AQ8N468 514 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 GVQW1Q8N7I0 195 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 MUC7Q8TAX7 377 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 TCTEX1D2Q8WW35 142 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 ABHD1Q96SE0 405 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 HSD17B10Q99714 261 aaKnown RBP7.19□□□□□ -1.26
NUP50-205ENST00000419387 AKIP1Q9NQ31 210 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 C19orf73Q9NVV2 129 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 SIGLEC8Q9NYZ4 499 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 CCDC59Q9P031 241 aaKnown RBP7.19□□□□□ -1.26
NUP50-205ENST00000419387 ADAM30Q9UKF2 790 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 ANAPC10Q9UM13 185 aa7.19□□□□□ -1.26
NUP50-205ENST00000419387 TNCP24821 2201 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 OR2A4O95047 310 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 NAT1P18440 290 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 BRWD1-AS2P59051 145 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 TAS2R20P59543 309 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 ZNF45Q02386 682 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 EIF4EBP1Q13541 118 aaPredicted RBP7.18□□□□□ -1.26
NUP50-205ENST00000419387 EXOSC2Q13868 293 aaKnown RBP7.18□□□□□ -1.26
NUP50-205ENST00000419387 C10orf55Q5SWW7 151 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 LAX1Q8IWV1 398 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 VKORC1L1Q8N0U8 176 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 PUSL1Q8N0Z8 303 aaKnown RBP7.18□□□□□ -1.26
NUP50-205ENST00000419387 BEST4Q8NFU0 473 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 OR4S2Q8NH73 311 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 VSTM2AQ8TAG5 236 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 GPX8Q8TED1 209 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 DGCR14Q96DF8 476 aaKnown RBP7.18□□□□□ -1.26
NUP50-205ENST00000419387 OR2A7Q96R45 310 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 TM2D3Q9BRN9 247 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 DIABLOQ9NR28 239 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 PEMTQ9UBM1 199 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 RSL24D1Q9UHA3 163 aaKnown RBP7.18□□□□□ -1.26
NUP50-205ENST00000419387 DNAH7Q8WXX0 4024 aa7.18□□□□□ -1.26
NUP50-205ENST00000419387 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.17□□□□□ -1.26
NUP50-205ENST00000419387 HMX3A6NHT5 357 aa7.17□□□□□ -1.26
NUP50-205ENST00000419387 TEX22C9J3V5 150 aa7.17□□□□□ -1.26
NUP50-205ENST00000419387 BMPR1BO00238 502 aa7.17□□□□□ -1.26
NUP50-205ENST00000419387 OR2J3O76001 311 aa7.17□□□□□ -1.26
NUP50-205ENST00000419387 KBTBD11O94819 623 aa7.17□□□□□ -1.26
NUP50-205ENST00000419387 IL6RP08887 468 aaPredicted RBP7.17□□□□□ -1.26
NUP50-205ENST00000419387 FCGR2CP31995 323 aa7.17□□□□□ -1.26
NUP50-205ENST00000419387 MAS1LP35410 378 aa7.17□□□□□ -1.26
NUP50-205ENST00000419387 KIR2DS2P43631 304 aa7.17□□□□□ -1.26
NUP50-205ENST00000419387 RPL27AP46776 148 aaKnown RBP7.17□□□□□ -1.26
NUP50-205ENST00000419387 MECP2P51608 486 aaKnown RBP7.17□□□□□ -1.26
NUP50-205ENST00000419387 ARPC4P59998 168 aa7.17□□□□□ -1.26
NUP50-205ENST00000419387 MSMO1Q15800 293 aa7.17□□□□□ -1.26
NUP50-205ENST00000419387 CASC10Q5T4H9 136 aa7.17□□□□□ -1.26
NUP50-205ENST00000419387 LCN12Q6JVE5 192 aa7.17□□□□□ -1.26
NUP50-205ENST00000419387 HOGA1Q86XE5 327 aa7.17□□□□□ -1.26
NUP50-205ENST00000419387 Q8N402 240 aa7.17□□□□□ -1.26
NUP50-205ENST00000419387 NECAP1Q8NC96 275 aa7.17□□□□□ -1.26
NUP50-205ENST00000419387 OR2K2Q8NGT1 345 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms