RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 SHARPINQ9H0F6 387 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 NCOR1P1Q9H4R4 102 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 SLA2Q9H6Q3 261 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 PLEKHF2Q9H8W4 249 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 PLSCR3Q9NRY6 295 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 TAS2R3Q9NYW6 316 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 GSKIPQ9P0R6 139 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 MBD2Q9UBB5 411 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 DUX4Q9UBX2 424 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 PAIP2BQ9ULR5 123 aaKnown RBP3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 PSG11Q9UQ72 335 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 TMED3Q9Y3Q3 217 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 LSM5Q9Y4Y9 91 aaKnown RBP3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 LINC00312Q9Y6C7 94 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 DSCAMO60469 2012 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 FRYQ5TBA9 3013 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 TRAV14DV4A0A0A6YYC5 116 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 KBTBD11-OT1A0A1B0GTJ5 212 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 HMSDA8MTL9 139 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 LYNX1G3V0Z9 82 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 C15orf65H3BRN8 121 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 M0R1X1 148 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 YPEL1O60688 119 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 PGLYRP1O75594 196 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 ATG12O94817 140 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 MPC2O95563 127 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 CDS2O95674 445 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 CLDN1O95832 211 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 IGHV2-70P01814 119 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 RLN2P04090 185 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 SOD3P08294 240 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 LYNX1P0DP58 116 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 COX6B1P14854 86 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 RPA2P15927 270 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 CCL3L1P16619 93 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 HLA-GP17693 338 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 PVALBP20472 110 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 OMGP23515 440 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 F2RP25116 425 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 UCP1P25874 307 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 PSMB6P28072 239 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 KIR2DS2P43631 304 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 AP2S1P53680 142 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 CD81P60033 236 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 ERVK-16P61578 105 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 GNB1P62873 340 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 GNB2P62879 340 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 RPL31P62899 125 aaKnown RBP3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 UBA52P62987 128 aaKnown RBP3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 CACNA1DQ01668 2161 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 TLE4Q04727 773 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF816Q0VGE8 651 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF273Q14593 569 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 OPCMLQ14982 345 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 MSMO1Q15800 293 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 MORN2Q502X0 79 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR2B11Q5JQS5 317 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZC2HC1BQ5TFG8 222 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 PRAMEF5Q5TYX0 476 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 C11orf71Q6IPW1 123 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 PRSS54Q6PEW0 395 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 LYPD2Q6UXB3 125 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 BTNL3Q6UXE8 466 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 TCF23Q7RTU1 214 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF546Q86UE3 836 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 RTTNQ86VV8 2226 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 LYG1Q8N1E2 194 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 FGFRL1Q8N441 504 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 LRTM2Q8N967 370 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR10A7Q8NGE5 316 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR1S1Q8NH92 325 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 IL22RA2Q969J5 263 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 ABHD14BQ96IU4 210 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 C18orf12Q96KH6 178 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR10C1Q96KK4 312 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 YPEL2Q96QA6 119 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 HSD17B10Q99714 261 aaKnown RBP3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 CCL19Q99731 98 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 GON7Q9BXV9 100 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 MFFQ9GZY8 342 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 ARL6Q9H0F7 186 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 PARP12Q9H0J9 701 aaKnown RBP3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 TMEM222Q9H0R3 208 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 NARFLQ9H6Q4 476 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 C19orf12Q9NSK7 152 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 PIPOXQ9P0Z9 390 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 CTSZQ9UBR2 303 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 CLN8Q9UBY8 286 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 MIOXQ9UGB7 285 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 RNF150Q9ULK6 438 aa3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 RCL1Q9Y2P8 373 aaKnown RBP3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 KLF2Q9Y5W3 355 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P20-201ENST00000417997 PRR14LQ5THK1 2151 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 YLPM1P49750 1951 aaKnown RBP3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 A0A0D9SG52 128 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 hCG_1809904A0A1W2PP81 198 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 A0A1W2PPE2 198 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 A0A1W2PPI3 338 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 A0A1W2PR64 198 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 A0A1W2PRV1 198 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms