RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	OR4A47	Q6IF82	309 aa		6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651	VKORC1L1	Q8N0U8	176 aa		6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651	GIMAP1	Q8WWP7	306 aa		6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651	S100A13	Q99584	98 aa		6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651	NICN1	Q9BSH3	213 aa		6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ZNF436	Q9C0F3	470 aa	Predicted RBP	6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651	SPACA1	Q9HBV2	294 aa		6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651	SDHAF2	Q9NX18	166 aa		6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651		A0A0A6YYD4	124 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	IGHV3-21	A0A0B4J1V1	117 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	OR4C46	A6NHA9	309 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	CGB1	A6NKQ9	187 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	LINC00473	A8K010	186 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ZNF705E	A8MWA4	302 aa	Predicted RBP	6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	RAB27B	O00194	218 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	FKBP6	O75344	327 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	CRTAP	O75718	401 aa	Predicted RBP	6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	SCGB1D2	O95969	90 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	NAPSA	O96009	420 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	SAA1	P0DJI8	122 aa	Predicted RBP	6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ZNF367	Q7RTV3	350 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ZNF554	Q86TJ5	538 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	C6orf223	Q8N319	242 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	TMEM190	Q8WZ59	177 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	MARC2	Q969Z3	335 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	LGALS12	Q96DT0	336 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	NEDD4L	Q96PU5	975 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	TMEM138	Q9NPI0	162 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	TAGLN3	Q9UI15	199 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	GMPPB	Q9Y5P6	360 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ETV7	Q9Y603	341 aa		6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	LRP1	Q07954	4544 aa	Known RBP	6.11	□□□□□ -1.43
NIF3L1-206	ENST00000416651	TMEM212	A6NML5	194 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	C15orf61	A6NNL5	157 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ITGB1BP1	O14713	200 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	CA11	O75493	328 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	CRYZL1	O95825	349 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	HTR2C	P28335	458 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	DEFB131A	P59861	70 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	UBE2K	P61086	200 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	GNGT1	P63211	74 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	DLK1	P80370	383 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	KDM4D	Q6B0I6	523 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	TEX45	Q8NA69	505 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ZNF502	Q8TBZ5	544 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	PTX4	Q96A99	478 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	EEF1AKMT3	Q96AZ1	226 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	FYTTD1	Q96QD9	318 aa	Known RBP	6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	CIB1	Q99828	191 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	C20orf24	Q9BUV8	137 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	KRTAP1-5	Q9BYS1	174 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	RDH8	Q9NYR8	311 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ABRACL	Q9P1F3	81 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ZNF221	Q9UK13	617 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ZNF257	Q9Y2Q1	563 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	UFC1	Q9Y3C8	167 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	RNF213	Q63HN8	5207 aa		6.1	□□□□□ -1.43
NIF3L1-206	ENST00000416651	IGLV11-55	A0A075B6I3	123 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	NBDY	A0A0U1RRE5	68 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	KNCN	A6PVL3	124 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ZNF780A	O75290	641 aa	Predicted RBP	6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	GAL	P22466	123 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	AWAT2	Q6E213	333 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	PLET1	Q6UQ28	207 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	JAGN1	Q8N5M9	183 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ACBD7	Q8N6N7	88 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	CSNK1G2-AS1	Q8NCQ2	148 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	OR6M1	Q8NGM8	313 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	OR8J1	Q8NGP2	316 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ZNF503	Q96F45	646 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	CPNE2	Q96FN4	548 aa	Predicted RBP	6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	YTHDF1	Q9BYJ9	559 aa	Known RBP	6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	PRRG3	Q9BZD7	231 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	OR2D2	Q9H210	308 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	CHMP1A	Q9HD42	196 aa	Predicted RBP	6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	AMBN	Q9NP70	447 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	AK3	Q9UIJ7	227 aa		6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	EXOG	Q9Y2C4	368 aa	Known RBP	6.09	□□□□□ -1.43
NIF3L1-206	ENST00000416651	OR2T8	A6NH00	312 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	NPIPB5	A8MRT5	1133 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	CHEK1	O14757	476 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	TGOLN2	O43493	480 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	FAM107A	O95990	144 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	LALBA	P00709	142 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	GLA	P06280	429 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	CRYGC	P07315	174 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	MIF	P14174	115 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	HTN3	P15516	51 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	PSMB6	P28072	239 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	SNRPG	P62308	76 aa	Known RBP	6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	PPP3R1	P63098	170 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	HLA-DRB3	P79483	266 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	VMA21	Q3ZAQ7	101 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	RNF212	Q495C1	297 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	OR2B11	Q5JQS5	317 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	FAM90A2P	Q658T7	463 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	LAMTOR1	Q6IAA8	161 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	ZNRF2	Q8NHG8	242 aa		6.08	□□□□□ -1.44
NIF3L1-206	ENST00000416651	SPIN2A	Q99865	258 aa		6.08	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms