RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 ZNF71Q9NQZ8 489 aaPredicted RBP13.8□□□□□ -0.2
LIMS2-208ENST00000410011 TRAV9-1A0A075B6T8 112 aa13.8□□□□□ -0.2
LIMS2-208ENST00000410011 FNDC10F2Z333 226 aa13.8□□□□□ -0.2
LIMS2-208ENST00000410011 CHRNA7P36544 502 aa13.8□□□□□ -0.2
LIMS2-208ENST00000410011 SSTP61278 116 aa13.8□□□□□ -0.2
LIMS2-208ENST00000410011 FAM78BQ5VT40 261 aa13.8□□□□□ -0.2
LIMS2-208ENST00000410011 BEND2Q8NDZ0 799 aa13.8□□□□□ -0.2
LIMS2-208ENST00000410011 SFRP2Q96HF1 295 aa13.8□□□□□ -0.2
LIMS2-208ENST00000410011 MEGF10Q96KG7 1140 aa13.8□□□□□ -0.2
LIMS2-208ENST00000410011 AHRRA9YTQ3 701 aa13.79□□□□□ -0.2
LIMS2-208ENST00000410011 EGR1P18146 543 aa13.79□□□□□ -0.2
LIMS2-208ENST00000410011 EDDM3AQ14507 147 aa13.79□□□□□ -0.2
LIMS2-208ENST00000410011 TMEM140Q9NV12 185 aa13.79□□□□□ -0.2
LIMS2-208ENST00000410011 CGAP01215 116 aa13.79□□□□□ -0.2
LIMS2-208ENST00000410011 CRYAAP02489 173 aa13.79□□□□□ -0.2
LIMS2-208ENST00000410011 ARL14EPLP0DKL9 152 aa13.79□□□□□ -0.2
LIMS2-208ENST00000410011 ZNF134P52741 427 aa13.79□□□□□ -0.2
LIMS2-208ENST00000410011 YPEL3P61236 119 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-208ENST00000410011 ZNF664Q8N3J9 261 aa13.79□□□□□ -0.2
LIMS2-208ENST00000410011 GBGT1Q8N5D6 347 aa13.79□□□□□ -0.2
LIMS2-208ENST00000410011 OR4S2Q8NH73 311 aa13.79□□□□□ -0.2
LIMS2-208ENST00000410011 PATZ1Q9HBE1 687 aaKnown RBP13.79□□□□□ -0.2
LIMS2-208ENST00000410011 FZR1Q9UM11 496 aa13.79□□□□□ -0.2
LIMS2-208ENST00000410011 TCF19Q9Y242 345 aa13.79□□□□□ -0.2
LIMS2-208ENST00000410011 LY96Q9Y6Y9 160 aa13.79□□□□□ -0.2
LIMS2-208ENST00000410011 TRAV17A0A0B4J275 112 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 C15orf61A6NNL5 157 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 LHBP01229 141 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 UBE2G2P60604 165 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 CLEC12BQ2HXU8 276 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 SSX9Q7RTT3 188 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 GCSAMQ8N6F7 178 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 OR2Z1Q8NG97 314 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 C1orf159Q96HA4 380 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 PRO1933Q9H354 126 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 ELOVL5Q9NYP7 299 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 DUSP13Q9UII6 198 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 TRAPPC1Q9Y5R8 145 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 CACNA1GO43497 2377 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 A0A0U1RQK1 487 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 ZNF320A2RRD8 509 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 TNFSF13O75888 250 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 RPL29P47914 159 aaKnown RBP13.78□□□□□ -0.2
LIMS2-208ENST00000410011 DERL1Q9BUN8 251 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 OPN3Q9H1Y3 402 aaPredicted RBP13.78□□□□□ -0.2
LIMS2-208ENST00000410011 FOXA2Q9Y261 457 aaPredicted RBP13.78□□□□□ -0.2
LIMS2-208ENST00000410011 SLC25A15Q9Y619 301 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 ARL2-SNX15V9GYD0 113 aa13.78□□□□□ -0.2
LIMS2-208ENST00000410011 TRBV20OR9-2A0A075B6H5 130 aa13.77□□□□□ -0.21
LIMS2-208ENST00000410011 IGHV3-13P01766 116 aa13.77□□□□□ -0.21
LIMS2-208ENST00000410011 C1QTNF9P0C862 333 aa13.77□□□□□ -0.21
LIMS2-208ENST00000410011 POU2AF1Q16633 256 aa13.77□□□□□ -0.21
LIMS2-208ENST00000410011 LTC4SQ16873 150 aa13.77□□□□□ -0.21
LIMS2-208ENST00000410011 RPL39P5Q59GN2 51 aa13.77□□□□□ -0.21
LIMS2-208ENST00000410011 MIC13Q5XKP0 118 aa13.77□□□□□ -0.21
LIMS2-208ENST00000410011 BHLHA15Q7RTS1 189 aaPredicted RBP13.77□□□□□ -0.21
LIMS2-208ENST00000410011 ABHD12Q8N2K0 398 aa13.77□□□□□ -0.21
LIMS2-208ENST00000410011 FDCSPQ8NFU4 85 aa13.77□□□□□ -0.21
LIMS2-208ENST00000410011 C11orf52Q96A22 123 aa13.77□□□□□ -0.21
LIMS2-208ENST00000410011 TMEM14BQ9NUH8 114 aa13.77□□□□□ -0.21
LIMS2-208ENST00000410011 MDFIC2A0A1B0GVS7 189 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 HSPE1P61604 102 aaKnown RBP13.76□□□□□ -0.21
LIMS2-208ENST00000410011 TEPPQ6URK8 271 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 ZNF114Q8NC26 417 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 SGMS2Q8NHU3 365 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 STARD4Q96DR4 205 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 C2orf88Q9BSF0 95 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 CALYQ9NYX4 217 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 PROCRQ9UNN8 238 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 C9JCJ5 164 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 MT-CO2P00403 227 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 AREGP15514 252 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 TIMP3P35625 211 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 RHOBP62745 196 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 RAB31Q13636 194 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 IQCJQ1A5X6 159 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 C3orf36Q3SXR2 165 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 OR5T1Q8NG75 326 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 CORO2AQ92828 525 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 ADTRPQ96IZ2 230 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 NDUFAF3Q9BU61 184 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 SFXN3Q9BWM7 321 aa13.76□□□□□ -0.21
LIMS2-208ENST00000410011 TRAV3A0A0B4J244 114 aa13.75□□□□□ -0.21
LIMS2-208ENST00000410011 M0R296 226 aa13.75□□□□□ -0.21
LIMS2-208ENST00000410011 IL6RP08887 468 aaPredicted RBP13.75□□□□□ -0.21
LIMS2-208ENST00000410011 THBS3P49746 956 aa13.75□□□□□ -0.21
LIMS2-208ENST00000410011 CCL11P51671 97 aa13.75□□□□□ -0.21
LIMS2-208ENST00000410011 TEX38Q6PEX7 206 aa13.75□□□□□ -0.21
LIMS2-208ENST00000410011 VKORC1L1Q8N0U8 176 aa13.75□□□□□ -0.21
LIMS2-208ENST00000410011 DKK4Q9UBT3 224 aa13.75□□□□□ -0.21
LIMS2-208ENST00000410011 HCFC1P51610 2035 aa13.75□□□□□ -0.21
LIMS2-208ENST00000410011 GCHFRP30047 84 aa13.75□□□□□ -0.21
LIMS2-208ENST00000410011 EFNB3Q15768 340 aa13.75□□□□□ -0.21
LIMS2-208ENST00000410011 ARSJQ5FYB0 599 aaPredicted RBP13.75□□□□□ -0.21
LIMS2-208ENST00000410011 UNQ6494/PRO21346Q6UXR6 183 aa13.75□□□□□ -0.21
LIMS2-208ENST00000410011 OR10G8Q8NGN5 311 aa13.75□□□□□ -0.21
LIMS2-208ENST00000410011 COL6A3P12111 3177 aa13.75□□□□□ -0.21
LIMS2-208ENST00000410011 NKX2-8O15522 239 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 ATP5IP56385 69 aaPredicted RBP13.74□□□□□ -0.21
LIMS2-208ENST00000410011 SELENOTP62341 195 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms