RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 CA2P00918 260 aa16.34■□□□□ 0.21
C4orf48-202ENST00000409860 MECP2P51608 486 aaKnown RBP16.34■□□□□ 0.21
C4orf48-202ENST00000409860 RAB25P57735 213 aa16.34■□□□□ 0.21
C4orf48-202ENST00000409860 DHRS2Q13268 280 aa16.34■□□□□ 0.21
C4orf48-202ENST00000409860 PRSS8Q16651 343 aa16.34■□□□□ 0.21
C4orf48-202ENST00000409860 RGS21Q2M5E4 152 aa16.34■□□□□ 0.21
C4orf48-202ENST00000409860 KRTAP24-1Q3LI83 254 aa16.34■□□□□ 0.21
C4orf48-202ENST00000409860 TMEM268Q5VZI3 342 aa16.34■□□□□ 0.21
C4orf48-202ENST00000409860 SLC35E3Q7Z769 313 aa16.34■□□□□ 0.21
C4orf48-202ENST00000409860 LYG2Q86SG7 212 aa16.34■□□□□ 0.21
C4orf48-202ENST00000409860 MMD2Q8IY49 270 aa16.34■□□□□ 0.21
C4orf48-202ENST00000409860 CADM3Q8N126 398 aa16.34■□□□□ 0.21
C4orf48-202ENST00000409860 TMEM167AQ8TBQ9 72 aa16.34■□□□□ 0.21
C4orf48-202ENST00000409860 TAF15Q92804 592 aaKnown RBP eCLIP16.34■□□□□ 0.21
C4orf48-202ENST00000409860 SEC22AQ96IW7 307 aa16.34■□□□□ 0.21
C4orf48-202ENST00000409860 C16orf95Q9H693 158 aa16.34■□□□□ 0.21
C4orf48-202ENST00000409860 C9orf170A2RU37 121 aa16.33■□□□□ 0.2
C4orf48-202ENST00000409860 FCN1O00602 326 aa16.33■□□□□ 0.2
C4orf48-202ENST00000409860 ACTL6BO94805 426 aa16.33■□□□□ 0.2
C4orf48-202ENST00000409860 IGHG2P01859 326 aa16.33■□□□□ 0.2
C4orf48-202ENST00000409860 VDAC2P45880 294 aaPredicted RBP16.33■□□□□ 0.2
C4orf48-202ENST00000409860 GNB1P62873 340 aa16.33■□□□□ 0.2
C4orf48-202ENST00000409860 Q6ZS46 218 aa16.33■□□□□ 0.2
C4orf48-202ENST00000409860 H2BFWTQ7Z2G1 175 aa16.33■□□□□ 0.2
C4orf48-202ENST00000409860 SELENOHQ8IZQ5 122 aaKnown RBP16.33■□□□□ 0.2
C4orf48-202ENST00000409860 LHFPL5Q8TAF8 219 aa16.33■□□□□ 0.2
C4orf48-202ENST00000409860 TMEM158Q8WZ71 300 aa16.33■□□□□ 0.2
C4orf48-202ENST00000409860 RRNAD1Q96FB5 475 aaKnown RBP16.33■□□□□ 0.2
C4orf48-202ENST00000409860 HSPB9Q9BQS6 159 aa16.33■□□□□ 0.2
C4orf48-202ENST00000409860 PRR13Q9NZ81 148 aa16.33■□□□□ 0.2
C4orf48-202ENST00000409860 IGHV7-81A0A0B4J1V7 117 aa16.32■□□□□ 0.2
C4orf48-202ENST00000409860 INMT-MINDY4F8WBC2 141 aa16.32■□□□□ 0.2
C4orf48-202ENST00000409860 UPK2O00526 184 aa16.32■□□□□ 0.2
C4orf48-202ENST00000409860 CX3CL1P78423 397 aa16.32■□□□□ 0.2
C4orf48-202ENST00000409860 PJVKQ0ZLH3 352 aa16.32■□□□□ 0.2
C4orf48-202ENST00000409860 ZNF562Q6V9R5 426 aa16.32■□□□□ 0.2
C4orf48-202ENST00000409860 FOXRED2Q8IWF2 684 aa16.32■□□□□ 0.2
C4orf48-202ENST00000409860 COQ8AQ8NI60 647 aa16.32■□□□□ 0.2
C4orf48-202ENST00000409860 OR51J1Q9H342 316 aa16.32■□□□□ 0.2
C4orf48-202ENST00000409860 ZNF430Q9H8G1 570 aaPredicted RBP16.32■□□□□ 0.2
C4orf48-202ENST00000409860 SNAPC5O75971 98 aa16.31■□□□□ 0.2
C4orf48-202ENST00000409860 CNIH1O95406 144 aa16.31■□□□□ 0.2
C4orf48-202ENST00000409860 DUS4LO95620 317 aaKnown RBP16.31■□□□□ 0.2
C4orf48-202ENST00000409860 IGKV1-5P01602 117 aa16.31■□□□□ 0.2
C4orf48-202ENST00000409860 MAS1LP35410 378 aa16.31■□□□□ 0.2
C4orf48-202ENST00000409860 RPL8P62917 257 aaKnown RBP16.31■□□□□ 0.2
C4orf48-202ENST00000409860 FOXL1Q12952 345 aa16.31■□□□□ 0.2
C4orf48-202ENST00000409860 TNXAQ16473 311 aa16.31■□□□□ 0.2
C4orf48-202ENST00000409860 ANKRD55Q3KP44 614 aa16.31■□□□□ 0.2
C4orf48-202ENST00000409860 FAM219AQ8IW50 185 aa16.31■□□□□ 0.2
C4orf48-202ENST00000409860 ABHD5Q8WTS1 349 aa16.31■□□□□ 0.2
C4orf48-202ENST00000409860 MARVELD1Q9BSK0 173 aa16.31■□□□□ 0.2
C4orf48-202ENST00000409860 C19orf24Q9BVV8 132 aa16.31■□□□□ 0.2
C4orf48-202ENST00000409860 PARP11Q9NR21 331 aa16.31■□□□□ 0.2
C4orf48-202ENST00000409860 MMP24Q9Y5R2 645 aa16.31■□□□□ 0.2
C4orf48-202ENST00000409860 A0A0B4J2A0 478 aa16.3■□□□□ 0.2
C4orf48-202ENST00000409860 A0A1B0GUS0 222 aa16.3■□□□□ 0.2
C4orf48-202ENST00000409860 DUXBA0A1W2PPF3 345 aa16.3■□□□□ 0.2
C4orf48-202ENST00000409860 AP4M1O00189 453 aa16.3■□□□□ 0.2
C4orf48-202ENST00000409860 PRAF2O60831 178 aa16.3■□□□□ 0.2
C4orf48-202ENST00000409860 IL5P05113 134 aa16.3■□□□□ 0.2
C4orf48-202ENST00000409860 IL6RP08887 468 aaPredicted RBP16.3■□□□□ 0.2
C4orf48-202ENST00000409860 SPNP16150 400 aa16.3■□□□□ 0.2
C4orf48-202ENST00000409860 FXYD3Q14802 87 aa16.3■□□□□ 0.2
C4orf48-202ENST00000409860 MRGPRG-AS1Q2M3A8 158 aa16.3■□□□□ 0.2
C4orf48-202ENST00000409860 TMEM95Q3KNT9 176 aa16.3■□□□□ 0.2
C4orf48-202ENST00000409860 SLC35G3Q8N808 338 aa16.3■□□□□ 0.2
C4orf48-202ENST00000409860 LRTM2Q8N967 370 aa16.3■□□□□ 0.2
C4orf48-202ENST00000409860 LINC01006Q8NI28 216 aa16.3■□□□□ 0.2
C4orf48-202ENST00000409860 ARPC1AQ92747 370 aa16.3■□□□□ 0.2
C4orf48-202ENST00000409860 SHPKQ9UHJ6 478 aa16.3■□□□□ 0.2
C4orf48-202ENST00000409860 TMEM89A2RUT3 159 aa16.29■□□□□ 0.2
C4orf48-202ENST00000409860 CLPSL1A2RUU4 121 aa16.29■□□□□ 0.2
C4orf48-202ENST00000409860 DHFRP00374 187 aa16.29■□□□□ 0.2
C4orf48-202ENST00000409860 FGF2P09038 288 aa16.29■□□□□ 0.2
C4orf48-202ENST00000409860 OR9G9P0C7N8 305 aa16.29■□□□□ 0.2
C4orf48-202ENST00000409860 HLA-GP17693 338 aa16.29■□□□□ 0.2
C4orf48-202ENST00000409860 NDPQ00604 133 aa16.29■□□□□ 0.2
C4orf48-202ENST00000409860 OR52B4Q8NGK2 314 aa16.29■□□□□ 0.2
C4orf48-202ENST00000409860 OR4A16Q8NH70 328 aa16.29■□□□□ 0.2
C4orf48-202ENST00000409860 GRPEL2Q8TAA5 225 aa16.29■□□□□ 0.2
C4orf48-202ENST00000409860 ZNF431Q8TF32 576 aaPredicted RBP16.29■□□□□ 0.2
C4orf48-202ENST00000409860 LSM10Q969L4 123 aaKnown RBP16.29■□□□□ 0.2
C4orf48-202ENST00000409860 PHB2Q99623 299 aa16.29■□□□□ 0.2
C4orf48-202ENST00000409860 SEC22CQ9BRL7 303 aa16.29■□□□□ 0.2
C4orf48-202ENST00000409860 GPN1Q9HCN4 374 aaPredicted RBP16.29■□□□□ 0.2
C4orf48-202ENST00000409860 PRNDQ9UKY0 176 aa16.29■□□□□ 0.2
C4orf48-202ENST00000409860 TRAV3A0A0B4J244 114 aa16.28■□□□□ 0.2
C4orf48-202ENST00000409860 LINC01548A6NM66 108 aa16.28■□□□□ 0.2
C4orf48-202ENST00000409860 ATP6V0E1O15342 81 aa16.28■□□□□ 0.2
C4orf48-202ENST00000409860 RBMXL2O75526 392 aaKnown RBP16.28■□□□□ 0.2
C4orf48-202ENST00000409860 P0C879 139 aa16.28■□□□□ 0.2
C4orf48-202ENST00000409860 MDKP21741 143 aaPredicted RBP16.28■□□□□ 0.2
C4orf48-202ENST00000409860 VDAC1P21796 283 aa16.28■□□□□ 0.2
C4orf48-202ENST00000409860 COMPP49747 757 aaPredicted RBP16.28■□□□□ 0.2
C4orf48-202ENST00000409860 MITD1Q8WV92 249 aa16.28■□□□□ 0.2
C4orf48-202ENST00000409860 COMMD5Q9GZQ3 224 aa16.28■□□□□ 0.2
C4orf48-202ENST00000409860 SERTAD4Q9NUC0 356 aa16.28■□□□□ 0.2
C4orf48-202ENST00000409860 ATRQ13535 2644 aa16.28■□□□□ 0.2
C4orf48-202ENST00000409860 IGF1P05019 195 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms