RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 LINC00311Q8N616 119 aa16.89■□□□□ 0.29
USP39-203ENST00000409470 C8orf31Q8N9H6 132 aa16.89■□□□□ 0.29
USP39-203ENST00000409470 A0A1B0GW64 132 aa16.89■□□□□ 0.29
USP39-203ENST00000409470 RBFOX3A6NFN3 312 aa16.89■□□□□ 0.29
USP39-203ENST00000409470 UQCRFS1P47985 274 aa16.89■□□□□ 0.29
USP39-203ENST00000409470 HSPE1P61604 102 aaKnown RBP16.89■□□□□ 0.29
USP39-203ENST00000409470 TMEM41BQ5BJD5 291 aa16.89■□□□□ 0.29
USP39-203ENST00000409470 OR9G1Q8NH87 305 aa16.89■□□□□ 0.29
USP39-203ENST00000409470 TMEM186Q96B77 213 aa16.89■□□□□ 0.29
USP39-203ENST00000409470 RARRES2Q99969 163 aa16.89■□□□□ 0.29
USP39-203ENST00000409470 AIFM2Q9BRQ8 373 aa16.89■□□□□ 0.29
USP39-203ENST00000409470 ENY2Q9NPA8 101 aa16.89■□□□□ 0.29
USP39-203ENST00000409470 KIAA1456Q9P272 454 aa16.89■□□□□ 0.29
USP39-203ENST00000409470 DNASE2O00115 360 aaPredicted RBP16.88■□□□□ 0.29
USP39-203ENST00000409470 LY6HO94772 140 aa16.88■□□□□ 0.29
USP39-203ENST00000409470 GNLYP22749 145 aa16.88■□□□□ 0.29
USP39-203ENST00000409470 VWC2Q2TAL6 325 aa16.88■□□□□ 0.29
USP39-203ENST00000409470 C4orf17Q53FE4 359 aa16.88■□□□□ 0.29
USP39-203ENST00000409470 ABHD12Q8N2K0 398 aa16.88■□□□□ 0.29
USP39-203ENST00000409470 ZNF596Q8TC21 504 aa16.88■□□□□ 0.29
USP39-203ENST00000409470 PRNDQ9UKY0 176 aa16.88■□□□□ 0.29
USP39-203ENST00000409470 OR51B2Q9Y5P1 312 aa16.88■□□□□ 0.29
USP39-203ENST00000409470 CACNA1AO00555 2505 aa16.88■□□□□ 0.29
USP39-203ENST00000409470 TET2Q6N021 2002 aaPredicted RBP16.88■□□□□ 0.29
USP39-203ENST00000409470 TMEM8BA6NDV4 472 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 FAM74A7A6NL05 159 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 SRRM4A7MD48 611 aaKnown RBP16.87■□□□□ 0.29
USP39-203ENST00000409470 H0YJW9 148 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 SOD3P08294 240 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 FAM74A3Q4VXF1 159 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 ZNF841Q6ZN19 808 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 ETV3LQ6ZN32 361 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 HINT2Q9BX68 163 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 A0A087X0M5 115 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 A0A1B0GX30 115 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 UPK2O00526 184 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 RRHO14718 337 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 NPBWR1P48145 328 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 HAGHQ16775 308 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 C11orf71Q6IPW1 123 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 FAM71F2Q6NXP2 309 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 CENPVQ7Z7K6 275 aaPredicted RBP16.87■□□□□ 0.29
USP39-203ENST00000409470 ZNF709Q8N972 641 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 OR5AN1Q8NGI8 311 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 OSR1Q8TAX0 266 aaPredicted RBP16.87■□□□□ 0.29
USP39-203ENST00000409470 SLC35B3Q9H1N7 401 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 TMEM133Q9H2Q1 129 aa16.87■□□□□ 0.29
USP39-203ENST00000409470 HIVEP3Q5T1R4 2406 aa16.86■□□□□ 0.29
USP39-203ENST00000409470 RAB11AP62491 216 aa16.86■□□□□ 0.29
USP39-203ENST00000409470 SP5Q6BEB4 398 aaPredicted RBP16.86■□□□□ 0.29
USP39-203ENST00000409470 LCN15Q6UWW0 184 aa16.86■□□□□ 0.29
USP39-203ENST00000409470 C11orf42Q8N5U0 333 aa16.86■□□□□ 0.29
USP39-203ENST00000409470 OR8B3Q8NGG8 313 aa16.86■□□□□ 0.29
USP39-203ENST00000409470 HARBI1Q96MB7 349 aa16.86■□□□□ 0.29
USP39-203ENST00000409470 OR8B2Q96RD0 313 aa16.86■□□□□ 0.29
USP39-203ENST00000409470 SMDT1Q9H4I9 107 aa16.86■□□□□ 0.29
USP39-203ENST00000409470 TRAV1-1A0A0B4J248 108 aa16.86■□□□□ 0.29
USP39-203ENST00000409470 A0A1W2PPH5 198 aa16.86■□□□□ 0.29
USP39-203ENST00000409470 IFNA4P05014 189 aa16.86■□□□□ 0.29
USP39-203ENST00000409470 MYOD1P15172 320 aa16.86■□□□□ 0.29
USP39-203ENST00000409470 DIAPH2-AS1Q14236 149 aa16.86■□□□□ 0.29
USP39-203ENST00000409470 ITLN2Q8WWU7 325 aaPredicted RBP16.86■□□□□ 0.29
USP39-203ENST00000409470 TIMD4Q96H15 378 aa16.86■□□□□ 0.29
USP39-203ENST00000409470 RCC1LQ96I51 464 aaKnown RBP16.86■□□□□ 0.29
USP39-203ENST00000409470 NPCDR1Q9BY65 106 aa16.86■□□□□ 0.29
USP39-203ENST00000409470 SMCO3A2RU48 225 aa16.85■□□□□ 0.29
USP39-203ENST00000409470 IL6RP08887 468 aaPredicted RBP16.85■□□□□ 0.29
USP39-203ENST00000409470 SAA1P0DJI8 122 aaPredicted RBP16.85■□□□□ 0.29
USP39-203ENST00000409470 CD1BP29016 333 aa16.85■□□□□ 0.29
USP39-203ENST00000409470 ZNF726P1Q15940 193 aa16.85■□□□□ 0.29
USP39-203ENST00000409470 ZNF787Q6DD87 383 aa16.85■□□□□ 0.29
USP39-203ENST00000409470 NEU4Q8WWR8 484 aaPredicted RBP16.85■□□□□ 0.29
USP39-203ENST00000409470 RAB1CQ92928 201 aa16.85■□□□□ 0.29
USP39-203ENST00000409470 FLYWCH2Q96CP2 140 aaKnown RBP16.85■□□□□ 0.29
USP39-203ENST00000409470 NABP2Q9BQ15 211 aa16.85■□□□□ 0.29
USP39-203ENST00000409470 MIOXQ9UGB7 285 aa16.85■□□□□ 0.29
USP39-203ENST00000409470 C17orf112F2Z3M2 114 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 OR13C7P0DN81 318 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 IL3RAP26951 378 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 ACSM6Q6P461 480 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 TGIF2LXQ8IUE1 241 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 CLRN3Q8NCR9 226 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 MBD3L1Q8WWY6 194 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 LHX4Q969G2 390 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 ST6GALNAC6Q969X2 333 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 BET1LQ9NYM9 111 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 SPTBN1Q01082 2364 aaKnown RBP16.84■□□□□ 0.29
USP39-203ENST00000409470 PPIAL4CA0A0B4J2A2 164 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 KBTBD11O94819 623 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 OPN1MWP04001 364 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 PPIAL4GP0DN37 164 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 OPN1MW2P0DN77 364 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 OPN1MW3P0DN78 364 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 FFAR4Q5NUL3 377 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 TMEM88Q6PEY1 159 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 SLC24A4Q8NFF2 622 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 CLDND2Q8NHS1 167 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 NEIL1Q96FI4 390 aaPredicted RBP16.84■□□□□ 0.29
USP39-203ENST00000409470 FKBP11Q9NYL4 201 aa16.84■□□□□ 0.29
USP39-203ENST00000409470 ZNF257Q9Y2Q1 563 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms