RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 MCM3APO60318 1980 aa5.26□□□□□ -1.57
SMCO1-201ENST00000397537 IGSF9BQ9UPX0 1349 aa5.26□□□□□ -1.57
SMCO1-201ENST00000397537 WDFY3Q8IZQ1 3526 aa5.26□□□□□ -1.57
SMCO1-201ENST00000397537 SPTAN1Q13813 2472 aaKnown RBP5.25□□□□□ -1.57
SMCO1-201ENST00000397537 MAP1LC3B2A6NCE7 125 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 FAM220BPB1ANY3 271 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 INMT-MINDY4F8WBC2 141 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 H2AFZP0C0S5 128 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 OR5G3P0C626 314 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 IGHV1-2P23083 117 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 POLR2IP36954 125 aaKnown RBP5.25□□□□□ -1.57
SMCO1-201ENST00000397537 AKR1C2P52895 323 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 RPS23P62266 143 aaKnown RBP5.25□□□□□ -1.57
SMCO1-201ENST00000397537 PMAIP1Q13794 54 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 TIMM50Q3ZCQ8 353 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 SLC18B1Q6NT16 456 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 C19orf48Q6RUI8 117 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 FA2HQ7L5A8 372 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 TGIF2LYQ8IUE0 185 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 ZCCHC24Q8N2G6 241 aaKnown RBP5.25□□□□□ -1.57
SMCO1-201ENST00000397537 ZNF439Q8NDP4 499 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 OR10G4Q8NGN3 311 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 IL22RA2Q969J5 263 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 PHYHIPLQ96FC7 376 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 HIST1H4GQ99525 98 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 MAP1LC3BQ9GZQ8 125 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 ZBP1Q9H171 429 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 MRPL27Q9P0M9 148 aaKnown RBP5.25□□□□□ -1.57
SMCO1-201ENST00000397537 TRAV8-2A0A0B4J237 113 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 TRAV8-6A0A0B4J262 113 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 DNAJC9-AS1A6NH13 148 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 IFITM10A6NMD0 228 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 K7N7A8 449 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 PRSS2P07478 247 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 AQP1P29972 269 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 MDH2P40926 338 aaKnown RBP5.25□□□□□ -1.57
SMCO1-201ENST00000397537 HSPE1P61604 102 aaKnown RBP5.25□□□□□ -1.57
SMCO1-201ENST00000397537 RPS21P63220 83 aaKnown RBP5.25□□□□□ -1.57
SMCO1-201ENST00000397537 SELENOWP63302 87 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 GSG1Q2KHT4 349 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 KIAA1644Q3SXP7 199 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 KHDC3LQ587J8 217 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 FAM162BQ5T6X4 162 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 FAAP20Q6NZ36 180 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 TBPL2Q6SJ96 375 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 Q6ZRP5 223 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 TRPT1Q86TN4 253 aaKnown RBP5.25□□□□□ -1.57
SMCO1-201ENST00000397537 OR51A2Q8NGJ7 313 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 PTX4Q96A99 478 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 ZNF689Q96CS4 500 aaPredicted RBP5.25□□□□□ -1.57
SMCO1-201ENST00000397537 BMFQ96LC9 184 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 SPACA5Q96QH8 159 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 MIEN1Q9BRT3 115 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 ZNF649Q9BS31 505 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 PSMG3Q9BT73 122 aaPredicted RBP5.25□□□□□ -1.57
SMCO1-201ENST00000397537 SLC17A9Q9BYT1 436 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 LINC00470Q9BZP3 86 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 ZDHHC11Q9H8X9 412 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 ZNF226Q9NYT6 803 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 YTHDF2Q9Y5A9 579 aaKnown RBP5.25□□□□□ -1.57
SMCO1-201ENST00000397537 LAMA5O15230 3695 aa5.25□□□□□ -1.57
SMCO1-201ENST00000397537 UBR5O95071 2799 aaPredicted RBP5.25□□□□□ -1.57
SMCO1-201ENST00000397537 ITPR3Q14573 2671 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 COL1A2P08123 1366 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 IGHV3OR16-9A0A0B4J2B5 98 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 FAM236DA0A1B0GTK5 79 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 AGPAT2O15120 278 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 DEGS1O15121 323 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 PDCD6O75340 191 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 DHRS3O75911 302 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 ARL6IP5O75915 188 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 ATP5G1P05496 136 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 FAM236CP0DP71 79 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 GZMBP10144 247 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 AZU1P20160 251 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 IMPA1P29218 277 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 GLRXP35754 106 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 TIMM10P62072 90 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 PLCXD2Q0VAA5 305 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 FZD2Q14332 565 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 REG3GQ6UW15 175 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 ZNF705AQ6ZN79 300 aaPredicted RBP5.24□□□□□ -1.57
SMCO1-201ENST00000397537 SLC35E3Q7Z769 313 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 GGNQ86UU5 652 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 OR9G1Q8NH87 305 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 FAM3DQ96BQ1 224 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 GPR82Q96P67 336 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 NAT8Q9UHE5 227 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 ERG28Q9UKR5 140 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 TRAPPC2LQ9UL33 140 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 TPRKBQ9Y3C4 175 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 ZNF780BQ9Y6R6 833 aa5.24□□□□□ -1.57
SMCO1-201ENST00000397537 VWA8A3KMH1 1905 aa5.23□□□□□ -1.57
SMCO1-201ENST00000397537 TCRBV3S1A0A5B6 114 aa5.23□□□□□ -1.57
SMCO1-201ENST00000397537 FOXI3A8MTJ6 420 aaPredicted RBP5.23□□□□□ -1.57
SMCO1-201ENST00000397537 AGTR1P30556 359 aa5.23□□□□□ -1.57
SMCO1-201ENST00000397537 NDUFA6P56556 154 aa5.23□□□□□ -1.57
SMCO1-201ENST00000397537 C1DQ13901 141 aaKnown RBP5.23□□□□□ -1.57
SMCO1-201ENST00000397537 CCSMST1Q4G0I0 132 aa5.23□□□□□ -1.57
SMCO1-201ENST00000397537 PRSS54Q6PEW0 395 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms