RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 GFI1Q99684 422 aa12.82□□□□□ -0.36
CHL1-202ENST00000397491 C19orf24Q9BVV8 132 aa12.82□□□□□ -0.36
CHL1-202ENST00000397491 SSPNQ14714 243 aa12.81□□□□□ -0.36
CHL1-202ENST00000397491 ZNF664Q8N3J9 261 aa12.81□□□□□ -0.36
CHL1-202ENST00000397491 TM2D1Q9BX74 207 aa12.81□□□□□ -0.36
CHL1-202ENST00000397491 TMEM242Q9NWH2 141 aa12.81□□□□□ -0.36
CHL1-202ENST00000397491 MST1P26927 711 aa12.81□□□□□ -0.36
CHL1-202ENST00000397491 OR51G1Q8NGK1 321 aa12.81□□□□□ -0.36
CHL1-202ENST00000397491 CACNA1IQ9P0X4 2223 aa12.81□□□□□ -0.36
CHL1-202ENST00000397491 K7EQS6 105 aa12.81□□□□□ -0.36
CHL1-202ENST00000397491 MGST3O14880 152 aa12.81□□□□□ -0.36
CHL1-202ENST00000397491 RPL8P62917 257 aaKnown RBP12.81□□□□□ -0.36
CHL1-202ENST00000397491 UNQ5815/PRO19632Q6UWF5 114 aa12.81□□□□□ -0.36
CHL1-202ENST00000397491 NEUROG1Q92886 237 aa12.81□□□□□ -0.36
CHL1-202ENST00000397491 SFXN3Q9BWM7 321 aa12.81□□□□□ -0.36
CHL1-202ENST00000397491 ANKRD31Q8N7Z5 1873 aa12.81□□□□□ -0.36
CHL1-202ENST00000397491 GAS1P54826 345 aa12.81□□□□□ -0.36
CHL1-202ENST00000397491 J3QRE1 110 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 IGFBP3P17936 291 aaPredicted RBP12.8□□□□□ -0.36
CHL1-202ENST00000397491 RTTNQ86VV8 2226 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 IGHMP01871 453 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 LGALS3P17931 250 aaKnown RBP12.8□□□□□ -0.36
CHL1-202ENST00000397491 NXPH1P58417 271 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 HIST1H1AQ02539 215 aaPredicted RBP12.8□□□□□ -0.36
CHL1-202ENST00000397491 ZNF826PQ6ZT77 177 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 C10orf126Q8N4M7 172 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 WDR31Q8NA23 367 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 ZNF714Q96N38 554 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 C17orf51A8MQB3 221 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 EREGO14944 169 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 TMEM108Q6UXF1 575 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 IFI6P09912 130 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 HTN1P15515 57 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 MPV17P39210 176 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 RPL27AP46776 148 aaKnown RBP12.8□□□□□ -0.36
CHL1-202ENST00000397491 SOX8P57073 446 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 MRPL32Q9BYC8 188 aaKnown RBP12.8□□□□□ -0.36
CHL1-202ENST00000397491 ELOVL5Q9NYP7 299 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 ZNF257Q9Y2Q1 563 aa12.8□□□□□ -0.36
CHL1-202ENST00000397491 POLR2AP24928 1970 aaKnown RBP12.8□□□□□ -0.36
CHL1-202ENST00000397491 KLRB1Q12918 225 aa12.79□□□□□ -0.36
CHL1-202ENST00000397491 TRA2AQ13595 282 aaKnown RBP eCLIP12.79□□□□□ -0.36
CHL1-202ENST00000397491 C18orf12Q96KH6 178 aa12.79□□□□□ -0.36
CHL1-202ENST00000397491 TRAV17A0A0B4J275 112 aa12.79□□□□□ -0.36
CHL1-202ENST00000397491 ODAMA1E959 279 aa12.79□□□□□ -0.36
CHL1-202ENST00000397491 GFRA1P56159 465 aa12.79□□□□□ -0.36
CHL1-202ENST00000397491 RSPO4Q2I0M5 234 aaPredicted RBP12.79□□□□□ -0.36
CHL1-202ENST00000397491 FBXW9Q5XUX1 488 aa12.79□□□□□ -0.36
CHL1-202ENST00000397491 GOLT1AQ6ZVE7 132 aa12.79□□□□□ -0.36
CHL1-202ENST00000397491 TMUB1Q9BVT8 246 aa12.79□□□□□ -0.36
CHL1-202ENST00000397491 IZUMO1RA6ND01 250 aa12.79□□□□□ -0.36
CHL1-202ENST00000397491 PGPEP1LA6NFU8 196 aa12.79□□□□□ -0.36
CHL1-202ENST00000397491 SAXO1Q8IYX7 474 aa12.79□□□□□ -0.36
CHL1-202ENST00000397491 GATAD1Q8WUU5 269 aa12.79□□□□□ -0.36
CHL1-202ENST00000397491 MESP2Q0VG99 397 aa12.79□□□□□ -0.36
CHL1-202ENST00000397491 RNASE7Q9H1E1 156 aaKnown RBP12.79□□□□□ -0.36
CHL1-202ENST00000397491 SMIM10L1P0DMW3 83 aa12.78□□□□□ -0.36
CHL1-202ENST00000397491 OR2K2Q8NGT1 345 aa12.78□□□□□ -0.36
CHL1-202ENST00000397491 SMIM10Q96HG1 83 aa12.78□□□□□ -0.36
CHL1-202ENST00000397491 CRISPLD2Q9H0B8 497 aa12.78□□□□□ -0.36
CHL1-202ENST00000397491 PKIBQ9C010 78 aa12.78□□□□□ -0.36
CHL1-202ENST00000397491 LPAR2Q9HBW0 351 aa12.78□□□□□ -0.36
CHL1-202ENST00000397491 IGHV1OR15-9A0A0B4J2B8 117 aa12.78□□□□□ -0.36
CHL1-202ENST00000397491 CTSSP25774 331 aa12.78□□□□□ -0.36
CHL1-202ENST00000397491 TFF2Q03403 129 aa12.78□□□□□ -0.36
CHL1-202ENST00000397491 C1orf53Q5VUE5 145 aa12.78□□□□□ -0.36
CHL1-202ENST00000397491 DOCK5Q9H7D0 1870 aa12.78□□□□□ -0.36
CHL1-202ENST00000397491 PPIHO43447 177 aaKnown RBP12.78□□□□□ -0.36
CHL1-202ENST00000397491 IGHV3-48P01763 117 aa12.78□□□□□ -0.36
CHL1-202ENST00000397491 ANOS1P23352 680 aa12.78□□□□□ -0.36
CHL1-202ENST00000397491 TMEM78Q5T7P6 136 aa12.78□□□□□ -0.36
CHL1-202ENST00000397491 BHLHA15Q7RTS1 189 aaPredicted RBP12.78□□□□□ -0.36
CHL1-202ENST00000397491 SEMA5BQ9P283 1151 aa12.78□□□□□ -0.36
CHL1-202ENST00000397491 TDGF1P3P51864 188 aa12.77□□□□□ -0.36
CHL1-202ENST00000397491 OR5A1Q8NGJ0 315 aa12.77□□□□□ -0.36
CHL1-202ENST00000397491 PRELID3AQ96N28 172 aa12.77□□□□□ -0.36
CHL1-202ENST00000397491 ANAPC13Q9BS18 74 aa12.77□□□□□ -0.36
CHL1-202ENST00000397491 UBTD1Q9HAC8 227 aa12.77□□□□□ -0.36
CHL1-202ENST00000397491 PRR32B1ATL7 298 aa12.77□□□□□ -0.36
CHL1-202ENST00000397491 RPS20P60866 119 aaKnown RBP12.77□□□□□ -0.36
CHL1-202ENST00000397491 SSBP4Q9BWG4 385 aaPredicted RBP12.77□□□□□ -0.36
CHL1-202ENST00000397491 RAXQ9Y2V3 346 aa12.77□□□□□ -0.36
CHL1-202ENST00000397491 TMEM56-RWDD3S4R434 201 aa12.77□□□□□ -0.36
CHL1-202ENST00000397491 TMEM229AB2RXF0 380 aa12.77□□□□□ -0.37
CHL1-202ENST00000397491 IGKV1D-43A0A0B4J1Z2 117 aa12.77□□□□□ -0.37
CHL1-202ENST00000397491 NAPSAO96009 420 aa12.77□□□□□ -0.37
CHL1-202ENST00000397491 STAG3L3P0CL85 134 aa12.77□□□□□ -0.37
CHL1-202ENST00000397491 INO80CQ6PI98 192 aaPredicted RBP12.77□□□□□ -0.37
CHL1-202ENST00000397491 NHP2Q9NX24 153 aaKnown RBP12.77□□□□□ -0.37
CHL1-202ENST00000397491 CACNA1DQ01668 2161 aa12.77□□□□□ -0.37
CHL1-202ENST00000397491 SPTAN1Q13813 2472 aaKnown RBP12.77□□□□□ -0.37
CHL1-202ENST00000397491 PROB1E7EW31 1015 aa12.76□□□□□ -0.37
CHL1-202ENST00000397491 TGFAP01135 160 aa12.76□□□□□ -0.37
CHL1-202ENST00000397491 GZMBP10144 247 aa12.76□□□□□ -0.37
CHL1-202ENST00000397491 MPZP25189 248 aa12.76□□□□□ -0.37
CHL1-202ENST00000397491 LRTM2Q8N967 370 aa12.76□□□□□ -0.37
CHL1-202ENST00000397491 TRBV6-7A0A0A0MS04 114 aa12.76□□□□□ -0.37
CHL1-202ENST00000397491 IGHV3-72A0A0B4J1Y9 119 aa12.76□□□□□ -0.37
CHL1-202ENST00000397491 TPTE2P1Q5T6R2 138 aa12.76□□□□□ -0.37
CHL1-202ENST00000397491 WFDC3Q8IUB2 231 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms