RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ZNF826PQ6ZT77 177 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 GATAD1Q8WUU5 269 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 OR5P3Q8WZ94 311 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 TRIOBPQ9H2D6 2365 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 A0A1W2PP11 408 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 CX3CL1P78423 397 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 RUNX1Q01196 453 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 COTL1Q14019 142 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 GUCA2BQ16661 112 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 SFRP2Q96HF1 295 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 RAX2Q96IS3 184 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 MRPL18Q9H0U6 180 aaKnown RBP4.66□□□□□ -1.66
VPS13C-204ENST00000395898 SCGB1A1P11684 91 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 ANOS1P23352 680 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-204ENST00000395898 SSBP3Q9BWW4 388 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-204ENST00000395898 A0A0G2JLM5 398 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 NPBWR2P48146 333 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 ARF6P62330 175 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 IGLV3-21P80748 117 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-204ENST00000395898 ZNF660Q6AZW8 331 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-204ENST00000395898 FAM90A1Q86YD7 464 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 EAF1Q96JC9 268 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-204ENST00000395898 DCTN5Q9BTE1 182 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 CGB1A6NKQ9 187 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 GPX1P07203 203 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 FABP2P12104 132 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 OR4B1Q8NGF8 309 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 SRXN1Q9BYN0 137 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 IGHV3-72A0A0B4J1Y9 119 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 LNP1A1A4G5 178 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 TMEM177Q53S58 311 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 OSR1Q8TAX0 266 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-204ENST00000395898 RGP1Q92546 391 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-204ENST00000395898 DOPEY2Q9Y3R5 2298 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 GFRA3O60609 400 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 NMBP08949 121 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 ACSF3Q4G176 576 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-204ENST00000395898 PMCHL2Q9BQD1 86 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 TM2D1Q9BX74 207 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 WNT5BQ9H1J7 359 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 AURKAIP1Q9NWT8 199 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-204ENST00000395898 GCM2O75603 506 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-204ENST00000395898 LINC01590Q5TEZ4 76 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 DCAF12L2Q5VW00 463 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 ZGRF1Q86YA3 2104 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 GPR146Q96CH1 333 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 A0A1W2PQM1 296 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 THY1P04216 161 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 TIMP4Q99727 224 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 PSMG3Q9BT73 122 aaPredicted RBP4.65□□□□□ -1.66
VPS13C-204ENST00000395898 GPR61Q9BZJ8 451 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 NPIPB11E5RHQ5 1161 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 ZG16O60844 167 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 CD8AP01732 235 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 C1QCP02747 245 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 TRGC2P03986 189 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 CSRP2Q16527 193 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 SPATA45Q537H7 98 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 C2orf83Q53S99 150 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 HIST1H4GQ99525 98 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 IL17BQ9UHF5 180 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 RND2P52198 227 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 ZNF818PQ6ZRF7 136 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 LINC00305Q7Z4B0 112 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 AMELYQ99218 206 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 NABP2Q9BQ15 211 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 PLSCR2Q9NRY7 297 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 CHCHD2Q9Y6H1 151 aaPredicted RBP4.65□□□□□ -1.66
VPS13C-204ENST00000395898 TMEM14DPA8MWL7 114 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 CDCP2Q5VXM1 449 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 RTN4RL2Q86UN3 420 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 RNASEH2CQ8TDP1 164 aaKnown RBP4.65□□□□□ -1.66
VPS13C-204ENST00000395898 HSPB9Q9BQS6 159 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 GEMIN7Q9H840 131 aaKnown RBP4.65□□□□□ -1.66
VPS13C-204ENST00000395898 UQCR10Q9UDW1 63 aa4.65□□□□□ -1.66
VPS13C-204ENST00000395898 VENTXO95231 258 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 IGLV3-19P01714 112 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 CD74P04233 296 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 EGR4Q05215 589 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 ASPHD2Q6ICH7 369 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 PARLQ9H300 379 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 ACACAQ13085 2346 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 LOC101059948A0A1B0GTJ6 334 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 HLA-DRB1P01911 266 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 RNF224P0DH78 156 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 CA7P43166 264 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 OR1P1Q8NH06 330 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 SRSF12Q8WXF0 261 aaKnown RBP4.65□□□□□ -1.67
VPS13C-204ENST00000395898 C2orf88Q9BSF0 95 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 H7C1H1 209 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 H2BFSP57053 126 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 PGLYRP4Q96LB8 373 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 PF4P02776 101 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 SMUG1Q53HV7 270 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 NHLRC3Q5JS37 347 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 MIC13Q5XKP0 118 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 DRAM1Q8N682 238 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 GPR82Q96P67 336 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 ZNF703Q9H7S9 590 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms