RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 OR4D5Q8NGN0 318 aa11.02□□□□□ -0.65
VAPB-202ENST00000395802 CFHR4Q92496 578 aa11.02□□□□□ -0.65
VAPB-202ENST00000395802 OR5AC2Q9NZP5 309 aa11.02□□□□□ -0.65
VAPB-202ENST00000395802 C1RLQ9NZP8 487 aa11.02□□□□□ -0.65
VAPB-202ENST00000395802 KIAA1456Q9P272 454 aa11.02□□□□□ -0.65
VAPB-202ENST00000395802 PRNDQ9UKY0 176 aa11.02□□□□□ -0.65
VAPB-202ENST00000395802 SVEP1Q4LDE5 3571 aa11.02□□□□□ -0.65
VAPB-202ENST00000395802 TSC22D2O75157 780 aa11.01□□□□□ -0.65
VAPB-202ENST00000395802 PITX3O75364 302 aa11.01□□□□□ -0.65
VAPB-202ENST00000395802 SCGB1D2O95969 90 aa11.01□□□□□ -0.65
VAPB-202ENST00000395802 IGKV1D-33P01593 117 aa11.01□□□□□ -0.65
VAPB-202ENST00000395802 IGKV1-33P01594 117 aa11.01□□□□□ -0.65
VAPB-202ENST00000395802 S100A10P60903 97 aa11.01□□□□□ -0.65
VAPB-202ENST00000395802 OPCMLQ14982 345 aa11.01□□□□□ -0.65
VAPB-202ENST00000395802 BRD3OSQ6XYD6 125 aa11.01□□□□□ -0.65
VAPB-202ENST00000395802 TMUB2Q71RG4 321 aa11.01□□□□□ -0.65
VAPB-202ENST00000395802 FOXRED2Q8IWF2 684 aa11.01□□□□□ -0.65
VAPB-202ENST00000395802 TEX45Q8NA69 505 aa11.01□□□□□ -0.65
VAPB-202ENST00000395802 ABCA1O95477 2261 aa11.01□□□□□ -0.65
VAPB-202ENST00000395802 KBTBD11O94819 623 aa11□□□□□ -0.65
VAPB-202ENST00000395802 OR2F2O95006 317 aa11□□□□□ -0.65
VAPB-202ENST00000395802 AVPP01185 164 aa11□□□□□ -0.65
VAPB-202ENST00000395802 MBPP02686 304 aaPredicted RBP11□□□□□ -0.65
VAPB-202ENST00000395802 HNF1AP20823 631 aa11□□□□□ -0.65
VAPB-202ENST00000395802 C4BPBP20851 252 aa11□□□□□ -0.65
VAPB-202ENST00000395802 ID3Q02535 119 aa11□□□□□ -0.65
VAPB-202ENST00000395802 SCGB2A2Q13296 93 aa11□□□□□ -0.65
VAPB-202ENST00000395802 OR2F1Q13607 317 aa11□□□□□ -0.65
VAPB-202ENST00000395802 EBI3Q14213 229 aa11□□□□□ -0.65
VAPB-202ENST00000395802 KLF17Q5JT82 389 aaPredicted RBP11□□□□□ -0.65
VAPB-202ENST00000395802 RUSC1-AS1Q66K80 236 aa11□□□□□ -0.65
VAPB-202ENST00000395802 VKORC1L1Q8N0U8 176 aa11□□□□□ -0.65
VAPB-202ENST00000395802 OR52E5Q8NH55 327 aa11□□□□□ -0.65
VAPB-202ENST00000395802 ARL6Q9H0F7 186 aa11□□□□□ -0.65
VAPB-202ENST00000395802 PAIP2BQ9ULR5 123 aaKnown RBP11□□□□□ -0.65
VAPB-202ENST00000395802 POMT1Q9Y6A1 747 aa11□□□□□ -0.65
VAPB-202ENST00000395802 FLNBO75369 2602 aaKnown RBP11□□□□□ -0.65
VAPB-202ENST00000395802 IGHV3OR16-10A0A075B7F0 116 aa11□□□□□ -0.65
VAPB-202ENST00000395802 A0A0D9SG52 128 aa11□□□□□ -0.65
VAPB-202ENST00000395802 A0A0G2JRQ6 117 aa11□□□□□ -0.65
VAPB-202ENST00000395802 DEDDO75618 318 aa11□□□□□ -0.65
VAPB-202ENST00000395802 SNRNP70P08621 437 aaKnown RBP11□□□□□ -0.65
VAPB-202ENST00000395802 SAA1P0DJI8 122 aaPredicted RBP11□□□□□ -0.65
VAPB-202ENST00000395802 NUP62P37198 522 aaPredicted RBP11□□□□□ -0.65
VAPB-202ENST00000395802 ACOT7LQ6ZUV0 252 aa11□□□□□ -0.65
VAPB-202ENST00000395802 C9orf139Q6ZV77 190 aa11□□□□□ -0.65
VAPB-202ENST00000395802 PUSL1Q8N0Z8 303 aaKnown RBP11□□□□□ -0.65
VAPB-202ENST00000395802 KCNRGQ8N5I3 272 aa11□□□□□ -0.65
VAPB-202ENST00000395802 DCUN1D4Q92564 292 aa11□□□□□ -0.65
VAPB-202ENST00000395802 CLCC1Q96S66 551 aa11□□□□□ -0.65
VAPB-202ENST00000395802 ZNF257Q9Y2Q1 563 aa11□□□□□ -0.65
VAPB-202ENST00000395802 FLNAP21333 2647 aaKnown RBP10.99□□□□□ -0.65
VAPB-202ENST00000395802 AKAP9Q99996 3911 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 A0A0U1RQK1 487 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 C15orf61A6NNL5 157 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 SRRM4A7MD48 611 aaKnown RBP10.99□□□□□ -0.65
VAPB-202ENST00000395802 K7EPK0 472 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 UPK2O00526 184 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 ACTL6BO94805 426 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 TMEM11P17152 192 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 AP2S1P53680 142 aaPredicted RBP10.99□□□□□ -0.65
VAPB-202ENST00000395802 RPL8P62917 257 aaKnown RBP10.99□□□□□ -0.65
VAPB-202ENST00000395802 MMDQ15546 238 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 AARDQ4LEZ3 155 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 SPNS3Q6ZMD2 512 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 Q6ZRM9 215 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 MMD2Q8IY49 270 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 DYNAPQ8N1N2 210 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 FAM71E2Q8N5Q1 922 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 INO80EQ8NBZ0 244 aaPredicted RBP10.99□□□□□ -0.65
VAPB-202ENST00000395802 OR5B3Q8NH48 314 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 TMEM167AQ8TBQ9 72 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 C17orf50Q8WW18 174 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 AJUBAQ96IF1 538 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 EAF1Q96JC9 268 aaPredicted RBP10.99□□□□□ -0.65
VAPB-202ENST00000395802 CIB3Q96Q77 187 aaPredicted RBP10.99□□□□□ -0.65
VAPB-202ENST00000395802 RAB40CQ96S21 281 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 COMMD5Q9GZQ3 224 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 HSPB7Q9UBY9 170 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 PITPNC1Q9UKF7 332 aa10.99□□□□□ -0.65
VAPB-202ENST00000395802 FOXA2Q9Y261 457 aaPredicted RBP10.99□□□□□ -0.65
VAPB-202ENST00000395802 E5RGE8 158 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 NBR2O15453 112 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 KCNAB3O43448 404 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 GPR137BO60478 399 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 IFNA17P01571 189 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 IL6RP08887 468 aaPredicted RBP10.98□□□□□ -0.65
VAPB-202ENST00000395802 MAS1LP35410 378 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 SPCS3P61009 180 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 VAMP2P63027 116 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 RELBQ01201 579 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 PLGLAQ15195 96 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 LRRC75BQ2VPJ9 315 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 TEX261Q6UWH6 196 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 MRPL41Q8IXM3 137 aaKnown RBP10.98□□□□□ -0.65
VAPB-202ENST00000395802 NPBQ8NG41 125 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 NSG2Q9Y328 171 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 LSM5Q9Y4Y9 91 aaKnown RBP10.98□□□□□ -0.65
VAPB-202ENST00000395802 U3KQ87 197 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 MYO9AB2RTY4 2548 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms