RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 KLF5Q13887 457 aaPredicted RBP10.55□□□□□ -0.72
CXCL12-205ENST00000395794 RPEL1Q2QD12 228 aa10.55□□□□□ -0.72
CXCL12-205ENST00000395794 FAM209BQ5JX69 171 aa10.55□□□□□ -0.72
CXCL12-205ENST00000395794 TMEM17Q86X19 198 aa10.55□□□□□ -0.72
CXCL12-205ENST00000395794 TTC9CQ8N5M4 171 aa10.55□□□□□ -0.72
CXCL12-205ENST00000395794 NECAP1Q8NC96 275 aa10.55□□□□□ -0.72
CXCL12-205ENST00000395794 TMEM167AQ8TBQ9 72 aa10.55□□□□□ -0.72
CXCL12-205ENST00000395794 CD300LFQ8TDQ1 290 aa10.55□□□□□ -0.72
CXCL12-205ENST00000395794 SLC25A46Q96AG3 418 aa10.55□□□□□ -0.72
CXCL12-205ENST00000395794 FYTTD1Q96QD9 318 aaKnown RBP10.55□□□□□ -0.72
CXCL12-205ENST00000395794 HRASLSQ9HDD0 168 aa10.55□□□□□ -0.72
CXCL12-205ENST00000395794 EHFQ9NZC4 300 aa10.55□□□□□ -0.72
CXCL12-205ENST00000395794 SULT1C2O00338 296 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 RBFOX2O43251 390 aaKnown RBP eCLIP10.54□□□□□ -0.72
CXCL12-205ENST00000395794 PRH1P02810 166 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 PRSS3P35030 304 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 SYNJ2BPP57105 145 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 RPL8P62917 257 aaKnown RBP10.54□□□□□ -0.72
CXCL12-205ENST00000395794 EXOSC2Q13868 293 aaKnown RBP10.54□□□□□ -0.72
CXCL12-205ENST00000395794 C10orf55Q5SWW7 151 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 SSX9Q7RTT3 188 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 PUSL1Q8N0Z8 303 aaKnown RBP10.54□□□□□ -0.72
CXCL12-205ENST00000395794 OR9G4Q8NGQ1 327 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 OR5H2Q8NGV7 314 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 OR4A5Q8NH83 315 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 WWC2-AS2Q96NR7 200 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 GPHA2Q96T91 129 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 ASCL2Q99929 193 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 FUNDC2Q9BWH2 189 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 AKIP1Q9NQ31 210 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 COMMD3Q9UBI1 195 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 ZNF257Q9Y2Q1 563 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 U3KQK5 164 aa10.54□□□□□ -0.72
CXCL12-205ENST00000395794 HMX3A6NHT5 357 aa10.53□□□□□ -0.72
CXCL12-205ENST00000395794 H0Y980 276 aa10.53□□□□□ -0.72
CXCL12-205ENST00000395794 HPRT1P00492 218 aa10.53□□□□□ -0.72
CXCL12-205ENST00000395794 HLA-GP17693 338 aa10.53□□□□□ -0.72
CXCL12-205ENST00000395794 TAS2R31P59538 309 aa10.53□□□□□ -0.72
CXCL12-205ENST00000395794 AADACL3Q5VUY0 350 aa10.53□□□□□ -0.72
CXCL12-205ENST00000395794 CMTM1Q8IZ96 169 aa10.53□□□□□ -0.72
CXCL12-205ENST00000395794 ZNF2Q9BSG1 426 aaPredicted RBP10.53□□□□□ -0.72
CXCL12-205ENST00000395794 SLC2A9Q9NRM0 540 aa10.53□□□□□ -0.72
CXCL12-205ENST00000395794 PEMTQ9UBM1 199 aa10.53□□□□□ -0.72
CXCL12-205ENST00000395794 TRBV9A0A0B4J1U6 114 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 NPIPB5A8MRT5 1133 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 OR2J3O76001 311 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 IGLV1-51P01701 117 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 TRBV12-3P01733 135 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 APOA1P02647 267 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 PMP2P02689 132 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 DEFA4P12838 97 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 NQO2P16083 231 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 RFX2P48378 723 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 BRWD1-AS2P59051 145 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 VBP1P61758 197 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 NCS1P62166 190 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 C15orf32Q32M92 178 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 LCE2AQ5TA79 106 aaPredicted RBP10.52□□□□□ -0.73
CXCL12-205ENST00000395794 OR4A47Q6IF82 309 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 DHRS11Q6UWP2 260 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 ZNF818PQ6ZRF7 136 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 DMBX1Q8NFW5 382 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 OR6F1Q8NGZ6 308 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 OR51H1Q8NH63 302 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 CMTM3Q96MX0 182 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 COMMD5Q9GZQ3 224 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 BET1LQ9NYM9 111 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 FBXL7Q9UJT9 491 aa10.52□□□□□ -0.73
CXCL12-205ENST00000395794 COL7A1Q02388 2944 aa10.51□□□□□ -0.73
CXCL12-205ENST00000395794 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.51□□□□□ -0.73
CXCL12-205ENST00000395794 TRIM64CA6NLI5 447 aa10.51□□□□□ -0.73
CXCL12-205ENST00000395794 TEX22C9J3V5 150 aa10.51□□□□□ -0.73
CXCL12-205ENST00000395794 IL6RP08887 468 aaPredicted RBP10.51□□□□□ -0.73
CXCL12-205ENST00000395794 ZNF735P0CB33 412 aa10.51□□□□□ -0.73
CXCL12-205ENST00000395794 HIST1H1BP16401 226 aaKnown RBP10.51□□□□□ -0.73
CXCL12-205ENST00000395794 S100GP29377 79 aa10.51□□□□□ -0.73
CXCL12-205ENST00000395794 RORCP51449 518 aa10.51□□□□□ -0.73
CXCL12-205ENST00000395794 ERVK-16P61578 105 aa10.51□□□□□ -0.73
CXCL12-205ENST00000395794 ZNF45Q02386 682 aa10.51□□□□□ -0.73
CXCL12-205ENST00000395794 MZT2AQ6P582 158 aa10.51□□□□□ -0.73
CXCL12-205ENST00000395794 HAPLN4Q86UW8 402 aa10.51□□□□□ -0.73
CXCL12-205ENST00000395794 SGPP2Q8IWX5 399 aa10.51□□□□□ -0.73
CXCL12-205ENST00000395794 AP3S1Q92572 193 aa10.51□□□□□ -0.73
CXCL12-205ENST00000395794 MOB3AQ96BX8 217 aa10.51□□□□□ -0.73
CXCL12-205ENST00000395794 PLEKHA2Q9HB19 425 aa10.51□□□□□ -0.73
CXCL12-205ENST00000395794 CYB5BO43169 146 aa10.5□□□□□ -0.73
CXCL12-205ENST00000395794 RBMXL2O75526 392 aaKnown RBP10.5□□□□□ -0.73
CXCL12-205ENST00000395794 EIF4EP06730 217 aaKnown RBP10.5□□□□□ -0.73
CXCL12-205ENST00000395794 NAT1P18440 290 aa10.5□□□□□ -0.73
CXCL12-205ENST00000395794 HLA-DMAP28067 261 aa10.5□□□□□ -0.73
CXCL12-205ENST00000395794 PSMB6P28072 239 aa10.5□□□□□ -0.73
CXCL12-205ENST00000395794 GNRHRP30968 328 aa10.5□□□□□ -0.73
CXCL12-205ENST00000395794 TSPAN5P62079 268 aa10.5□□□□□ -0.73
CXCL12-205ENST00000395794 LCN12Q6JVE5 192 aa10.5□□□□□ -0.73
CXCL12-205ENST00000395794 LPCAT3Q6P1A2 487 aa10.5□□□□□ -0.73
CXCL12-205ENST00000395794 SCPEP1Q9HB40 452 aa10.5□□□□□ -0.73
CXCL12-205ENST00000395794 COMMD9Q9P000 198 aa10.5□□□□□ -0.73
CXCL12-205ENST00000395794 ANAPC10Q9UM13 185 aa10.5□□□□□ -0.73
CXCL12-205ENST00000395794 FAM25AB3EWG3 89 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 FAM25CB3EWG5 89 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms