RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 LPAR2Q9HBW0 351 aa12.3□□□□□ -0.44
SCAF11-204ENST00000395454 STRAPQ9Y3F4 350 aaKnown RBP12.3□□□□□ -0.44
SCAF11-204ENST00000395454 FAM157AC9JC47 383 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 GPR37O15354 613 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 IGHV3-7P01780 117 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 CCL3L1P16619 93 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 ZNF137PP52743 207 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 F2RL1P55085 397 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 LCN2P80188 198 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 PJVKQ0ZLH3 352 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 DHRS7BQ6IAN0 325 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-204ENST00000395454 LYG1Q8N1E2 194 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 CIARTQ8N365 385 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-204ENST00000395454 UMAD1C9J7I0 102 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 H3BP45 60 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 SMAD7O15105 426 aaKnown RBP12.29□□□□□ -0.44
SCAF11-204ENST00000395454 IAPPP10997 89 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 ATP6V0CP27449 155 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 ZNF429Q86V71 674 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 TMEM217Q8N7C4 229 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 HSD17B11Q8NBQ5 300 aa12.29□□□□□ -0.44
SCAF11-204ENST00000395454 ACANP16112 2415 aa12.28□□□□□ -0.44
SCAF11-204ENST00000395454 A0A1W2PPE3 182 aa12.28□□□□□ -0.44
SCAF11-204ENST00000395454 IL6RP08887 468 aaPredicted RBP12.28□□□□□ -0.44
SCAF11-204ENST00000395454 OR8U8P0C7N1 319 aa12.28□□□□□ -0.44
SCAF11-204ENST00000395454 OR9G9P0C7N8 305 aa12.28□□□□□ -0.44
SCAF11-204ENST00000395454 ZFP36P26651 326 aaKnown RBP12.28□□□□□ -0.44
SCAF11-204ENST00000395454 HBG1P69891 147 aa12.28□□□□□ -0.44
SCAF11-204ENST00000395454 HBG2P69892 147 aa12.28□□□□□ -0.44
SCAF11-204ENST00000395454 ARL16Q0P5N6 197 aa12.28□□□□□ -0.44
SCAF11-204ENST00000395454 Q6ZRG5 221 aa12.28□□□□□ -0.44
SCAF11-204ENST00000395454 C11orf42Q8N5U0 333 aa12.28□□□□□ -0.44
SCAF11-204ENST00000395454 C8orf46Q8TAG6 207 aa12.28□□□□□ -0.44
SCAF11-204ENST00000395454 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.28□□□□□ -0.442e-6■■■■■ 35
SCAF11-204ENST00000395454 ABCA1O95477 2261 aa12.28□□□□□ -0.44
SCAF11-204ENST00000395454 PMS2P5A8MQ11 134 aa12.27□□□□□ -0.44
SCAF11-204ENST00000395454 SCAF4O95104 1147 aaKnown RBP12.27□□□□□ -0.44
SCAF11-204ENST00000395454 RBP4P02753 201 aa12.27□□□□□ -0.44
SCAF11-204ENST00000395454 ARG1P05089 322 aa12.27□□□□□ -0.44
SCAF11-204ENST00000395454 CT45A6P0DMU7 189 aa12.27□□□□□ -0.44
SCAF11-204ENST00000395454 CT45A5P0DMU8 189 aa12.27□□□□□ -0.44
SCAF11-204ENST00000395454 CT45A7P0DMV0 189 aa12.27□□□□□ -0.44
SCAF11-204ENST00000395454 GNG10P50151 68 aa12.27□□□□□ -0.44
SCAF11-204ENST00000395454 ERVK-16P61578 105 aa12.27□□□□□ -0.44
SCAF11-204ENST00000395454 RELBQ01201 579 aa12.27□□□□□ -0.44
SCAF11-204ENST00000395454 TMEM267Q0VDI3 215 aaPredicted RBP12.27□□□□□ -0.44
SCAF11-204ENST00000395454 TUSC1Q2TAM9 212 aa12.27□□□□□ -0.44
SCAF11-204ENST00000395454 PUSL1Q8N0Z8 303 aaKnown RBP12.27□□□□□ -0.44
SCAF11-204ENST00000395454 DTD1Q8TEA8 209 aa12.27□□□□□ -0.44
SCAF11-204ENST00000395454 CSPG4Q6UVK1 2322 aa12.27□□□□□ -0.45
SCAF11-204ENST00000395454 TET2Q6N021 2002 aaPredicted RBP12.27□□□□□ -0.45
SCAF11-204ENST00000395454 LOC105371242A0A075B767 164 aa12.27□□□□□ -0.45
SCAF11-204ENST00000395454 FOXH1O75593 365 aa12.27□□□□□ -0.45
SCAF11-204ENST00000395454 METTL15P1P0C7V9 234 aa12.27□□□□□ -0.45
SCAF11-204ENST00000395454 SPCS3P61009 180 aa12.27□□□□□ -0.45
SCAF11-204ENST00000395454 TAGLNQ01995 201 aaKnown RBP12.27□□□□□ -0.45
SCAF11-204ENST00000395454 TMEM249Q2WGJ8 235 aa12.27□□□□□ -0.45
SCAF11-204ENST00000395454 COMMD1Q8N668 190 aa12.27□□□□□ -0.45
SCAF11-204ENST00000395454 ST6GALNAC6Q969X2 333 aa12.27□□□□□ -0.45
SCAF11-204ENST00000395454 OR4C12Q96R67 309 aa12.27□□□□□ -0.45
SCAF11-204ENST00000395454 TMEM140Q9NV12 185 aa12.27□□□□□ -0.45
SCAF11-204ENST00000395454 B4DSR2 109 aa12.26□□□□□ -0.45
SCAF11-204ENST00000395454 C22orf46C9J442 243 aa12.26□□□□□ -0.45
SCAF11-204ENST00000395454 QTRT1Q9BXR0 403 aaKnown RBP12.26□□□□□ -0.45
SCAF11-204ENST00000395454 NUP50Q9UKX7 468 aa12.26□□□□□ -0.45
SCAF11-204ENST00000395454 TLN2Q9Y4G6 2542 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 C15orf61A6NNL5 157 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 SPANXN5Q5MJ07 72 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 DPPA3Q6W0C5 159 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 BPIFCQ8NFQ6 507 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 OR5AN1Q8NGI8 311 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 TNFRSF14Q92956 283 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 RHOVQ96L33 236 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 PSMG3Q9BT73 122 aaPredicted RBP12.25□□□□□ -0.45
SCAF11-204ENST00000395454 HRH4Q9H3N8 390 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 TMEM14BQ9NUH8 114 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 FOXA2Q9Y261 457 aaPredicted RBP12.25□□□□□ -0.45
SCAF11-204ENST00000395454 ZFHX3Q15911 3703 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 J3QR06 171 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 CRYZL1O95825 349 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 HRASP01112 189 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 MSMBP08118 114 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 IGHV1-8P0DP01 117 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 ERVFRD-1P60508 538 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 ATP6V1FQ16864 119 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 VWC2Q2TAL6 325 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 LRRC75BQ2VPJ9 315 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 C10orf91Q5T1B1 145 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 OR2G3Q8NGZ4 309 aa12.25□□□□□ -0.45
SCAF11-204ENST00000395454 PPIAL4CA0A0B4J2A2 164 aa12.24□□□□□ -0.45
SCAF11-204ENST00000395454 TMEM218A2RU14 115 aa12.24□□□□□ -0.45
SCAF11-204ENST00000395454 IFNA5P01569 189 aa12.24□□□□□ -0.45
SCAF11-204ENST00000395454 CD5P06127 495 aa12.24□□□□□ -0.45
SCAF11-204ENST00000395454 PPIAL4GP0DN37 164 aa12.24□□□□□ -0.45
SCAF11-204ENST00000395454 VDAC2P45880 294 aaPredicted RBP12.24□□□□□ -0.45
SCAF11-204ENST00000395454 RTL8BQ17RB0 113 aa12.24□□□□□ -0.45
SCAF11-204ENST00000395454 OR4A47Q6IF82 309 aa12.24□□□□□ -0.45
SCAF11-204ENST00000395454 CENPVQ7Z7K6 275 aaPredicted RBP12.24□□□□□ -0.45
SCAF11-204ENST00000395454 LINC01356Q8N9X3 169 aa12.24□□□□□ -0.45
SCAF11-204ENST00000395454 OR9G1Q8NH87 305 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms