RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 TMEM256Q8N2U0 113 aa17.11■□□□□ 0.33
CLK3-202ENST00000395066 FDCSPQ8NFU4 85 aa17.11■□□□□ 0.33
CLK3-202ENST00000395066 OR2Z1Q8NG97 314 aa17.11■□□□□ 0.33
CLK3-202ENST00000395066 BTF3L4Q96K17 158 aa17.11■□□□□ 0.33
CLK3-202ENST00000395066 CIB3Q96Q77 187 aaPredicted RBP17.11■□□□□ 0.33
CLK3-202ENST00000395066 GNG12Q9UBI6 72 aa17.11■□□□□ 0.33
CLK3-202ENST00000395066 POLR3KQ9Y2Y1 108 aaPredicted RBP17.11■□□□□ 0.33
CLK3-202ENST00000395066 PXMP4Q9Y6I8 212 aa17.11■□□□□ 0.33
CLK3-202ENST00000395066 DMXL1Q9Y485 3027 aa17.1■□□□□ 0.33
CLK3-202ENST00000395066 RRHO14718 337 aa17.1■□□□□ 0.33
CLK3-202ENST00000395066 TMPRSS2O15393 492 aa17.1■□□□□ 0.33
CLK3-202ENST00000395066 CD1BP29016 333 aa17.1■□□□□ 0.33
CLK3-202ENST00000395066 GPR12P47775 334 aa17.1■□□□□ 0.33
CLK3-202ENST00000395066 SMIM21Q3B7S5 101 aa17.1■□□□□ 0.33
CLK3-202ENST00000395066 LRP11Q86VZ4 500 aa17.1■□□□□ 0.33
CLK3-202ENST00000395066 ZNF114Q8NC26 417 aa17.1■□□□□ 0.33
CLK3-202ENST00000395066 A0A1B0GUS0 222 aa17.1■□□□□ 0.33
CLK3-202ENST00000395066 M0R143 59 aa17.1■□□□□ 0.33
CLK3-202ENST00000395066 HNF1AP20823 631 aa17.1■□□□□ 0.33
CLK3-202ENST00000395066 CD82P27701 267 aa17.1■□□□□ 0.33
CLK3-202ENST00000395066 DUTP33316 252 aaKnown RBP17.1■□□□□ 0.33
CLK3-202ENST00000395066 MSMPQ1L6U9 139 aa17.1■□□□□ 0.33
CLK3-202ENST00000395066 NAGKQ9UJ70 344 aa17.1■□□□□ 0.33
CLK3-202ENST00000395066 M0R1X1 148 aa17.09■□□□□ 0.33
CLK3-202ENST00000395066 NDUFB4O95168 129 aa17.09■□□□□ 0.33
CLK3-202ENST00000395066 C1QTNF9P0C862 333 aa17.09■□□□□ 0.33
CLK3-202ENST00000395066 ZNF134P52741 427 aa17.09■□□□□ 0.33
CLK3-202ENST00000395066 PRAMEF5Q5TYX0 476 aa17.09■□□□□ 0.33
CLK3-202ENST00000395066 ZNRF1Q8ND25 227 aa17.09■□□□□ 0.33
CLK3-202ENST00000395066 IMMP2LQ96T52 175 aa17.09■□□□□ 0.33
CLK3-202ENST00000395066 HSD17B10Q99714 261 aaKnown RBP17.09■□□□□ 0.33
CLK3-202ENST00000395066 DUSP13Q9UII6 198 aa17.09■□□□□ 0.33
CLK3-202ENST00000395066 DCHS1Q96JQ0 3298 aa17.09■□□□□ 0.33
CLK3-202ENST00000395066 RP1L1Q8IWN7 2480 aaPredicted RBP17.09■□□□□ 0.33
CLK3-202ENST00000395066 EP300Q09472 2414 aaPredicted RBP17.09■□□□□ 0.33
CLK3-202ENST00000395066 KIR2DL5BA0A0G2JN68 375 aa17.09■□□□□ 0.33
CLK3-202ENST00000395066 KIR2DL5BA0A0G2JPC4 375 aa17.09■□□□□ 0.33
CLK3-202ENST00000395066 SPINT2O43291 252 aa17.09■□□□□ 0.33
CLK3-202ENST00000395066 PRDX2P32119 198 aa17.09■□□□□ 0.33
CLK3-202ENST00000395066 C1orf229Q6ZS94 237 aaPredicted RBP17.09■□□□□ 0.33
CLK3-202ENST00000395066 KIR2DL5AQ8N109 375 aa17.09■□□□□ 0.33
CLK3-202ENST00000395066 ABHD12Q8N2K0 398 aa17.09■□□□□ 0.33
CLK3-202ENST00000395066 OPN3Q9H1Y3 402 aaPredicted RBP17.09■□□□□ 0.33
CLK3-202ENST00000395066 GCH1P30793 250 aa17.08■□□□□ 0.33
CLK3-202ENST00000395066 FOXL1Q12952 345 aa17.08■□□□□ 0.33
CLK3-202ENST00000395066 DIRC2Q96SL1 478 aa17.08■□□□□ 0.33
CLK3-202ENST00000395066 IGKV1D-17A0A075B6S4 117 aa17.08■□□□□ 0.32
CLK3-202ENST00000395066 NUPR1O60356 82 aa17.08■□□□□ 0.32
CLK3-202ENST00000395066 FAM201AQ5SY85 155 aa17.08■□□□□ 0.32
CLK3-202ENST00000395066 PRR7Q8TB68 274 aa17.08■□□□□ 0.32
CLK3-202ENST00000395066 MS4A10Q96PG2 267 aa17.08■□□□□ 0.32
CLK3-202ENST00000395066 KCNIP2Q9NS61 270 aa17.08■□□□□ 0.32
CLK3-202ENST00000395066 OR10J1P30954 320 aa17.07■□□□□ 0.32
CLK3-202ENST00000395066 CASP6P55212 293 aa17.07■□□□□ 0.32
CLK3-202ENST00000395066 PLA2G2CQ5R387 149 aa17.07■□□□□ 0.32
CLK3-202ENST00000395066 HEYLQ9NQ87 328 aaPredicted RBP17.07■□□□□ 0.32
CLK3-202ENST00000395066 WDR83OSQ9Y284 106 aa17.07■□□□□ 0.32
CLK3-202ENST00000395066 IGHV1-18A0A0C4DH31 117 aa17.07■□□□□ 0.32
CLK3-202ENST00000395066 G0S2P27469 103 aa17.07■□□□□ 0.32
CLK3-202ENST00000395066 GUSBP1Q15486 140 aa17.07■□□□□ 0.32
CLK3-202ENST00000395066 MIC13Q5XKP0 118 aa17.07■□□□□ 0.32
CLK3-202ENST00000395066 SGMS2Q8NHU3 365 aa17.07■□□□□ 0.32
CLK3-202ENST00000395066 SSMEM1Q8WWF3 244 aa17.07■□□□□ 0.32
CLK3-202ENST00000395066 ELOVL5Q9NYP7 299 aa17.07■□□□□ 0.32
CLK3-202ENST00000395066 IGHV2OR16-5A0A0B4J2B6 119 aa17.06■□□□□ 0.32
CLK3-202ENST00000395066 SFRP2Q96HF1 295 aa17.06■□□□□ 0.32
CLK3-202ENST00000395066 MS4A5Q9H3V2 200 aa17.06■□□□□ 0.32
CLK3-202ENST00000395066 ZNF718Q3SXZ3 478 aa17.06■□□□□ 0.32
CLK3-202ENST00000395066 MORN2Q502X0 79 aa17.06■□□□□ 0.32
CLK3-202ENST00000395066 TREML4Q6UXN2 200 aa17.06■□□□□ 0.32
CLK3-202ENST00000395066 OR4A16Q8NH70 328 aa17.06■□□□□ 0.32
CLK3-202ENST00000395066 A0A1W2PPV4 95 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 F6UZH7 168 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 ARL14EPLP0DKL9 152 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 WT1P19544 449 aaPredicted RBP17.05■□□□□ 0.32
CLK3-202ENST00000395066 RAB4AP20338 218 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 TDGF1P3P51864 188 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 TCF23Q7RTU1 214 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 MGAQ8IWI9 3026 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 MDFIC2A0A1B0GVS7 189 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 ZNF705FA8MVS1 300 aaPredicted RBP17.05■□□□□ 0.32
CLK3-202ENST00000395066 AQP7O14520 342 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 RBFOX2O43251 390 aaKnown RBP eCLIP17.05■□□□□ 0.32
CLK3-202ENST00000395066 ZNF705DP0CH99 300 aaPredicted RBP17.05■□□□□ 0.32
CLK3-202ENST00000395066 ZNF705BP0CI00 300 aaPredicted RBP17.05■□□□□ 0.32
CLK3-202ENST00000395066 MYOD1P15172 320 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 KITLGP21583 273 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 ADMP35318 185 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 TMEM249Q2WGJ8 235 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 RAB1CQ92928 201 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 MGST2Q99735 147 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 CACNA1GO43497 2377 aa17.05■□□□□ 0.32
CLK3-202ENST00000395066 TRBV20OR9-2A0A075B6H5 130 aa17.04■□□□□ 0.32
CLK3-202ENST00000395066 CNOT1A5YKK6 2376 aaKnown RBP17.04■□□□□ 0.32
CLK3-202ENST00000395066 DUX4L9Q6RFH8 374 aaPredicted RBP17.04■□□□□ 0.32
CLK3-202ENST00000395066 VHLLQ6RSH7 139 aa17.04■□□□□ 0.32
CLK3-202ENST00000395066 ZCCHC14Q8WYQ9 949 aaKnown RBP17.04■□□□□ 0.32
CLK3-202ENST00000395066 TMEM68Q96MH6 324 aa17.04■□□□□ 0.32
CLK3-202ENST00000395066 TBX15Q96SF7 602 aa17.04■□□□□ 0.32
CLK3-202ENST00000395066 IGHG3P01860 377 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms