RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ARL14EPLP0DKL9 152 aa12.65□□□□□ -0.38
VLDLR-202ENST00000382099 BHLHA15Q7RTS1 189 aaPredicted RBP12.65□□□□□ -0.38
VLDLR-202ENST00000382099 ELSPBP1Q96BH3 223 aa12.65□□□□□ -0.38
VLDLR-202ENST00000382099 COMMD5Q9GZQ3 224 aa12.65□□□□□ -0.38
VLDLR-202ENST00000382099 MTCH1Q9NZJ7 389 aa12.65□□□□□ -0.38
VLDLR-202ENST00000382099 TIMM9Q9Y5J7 89 aa12.65□□□□□ -0.38
VLDLR-202ENST00000382099 HLA-DQA1P01909 254 aa12.65□□□□□ -0.38
VLDLR-202ENST00000382099 ZXDAP98168 799 aa12.65□□□□□ -0.38
VLDLR-202ENST00000382099 ASCL4Q6XD76 172 aa12.65□□□□□ -0.38
VLDLR-202ENST00000382099 NEGR1Q7Z3B1 354 aa12.65□□□□□ -0.38
VLDLR-202ENST00000382099 MRPL13Q9BYD1 178 aaKnown RBP12.65□□□□□ -0.38
VLDLR-202ENST00000382099 A0A0G2JLM5 398 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 CA1P00915 261 aaPredicted RBP12.64□□□□□ -0.39
VLDLR-202ENST00000382099 DRD1P21728 446 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 AESQ08117 197 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 ASPHD1Q5U4P2 390 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 UFSP1Q6NVU6 142 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 TMEM45BQ96B21 275 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 OR2D2Q9H210 308 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 COLQQ9Y215 455 aaPredicted RBP12.64□□□□□ -0.39
VLDLR-202ENST00000382099 ATP23Q9Y6H3 246 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 MED12LQ86YW9 2145 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 PRR19A6NJB7 356 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 IGHG1P01857 330 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 AMY1AP04745 511 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 CCL1P22362 96 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 OR1D5P58170 312 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 GRB2P62993 217 aaKnown RBP12.64□□□□□ -0.39
VLDLR-202ENST00000382099 LTC4SQ16873 150 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 UBALD1Q8TB05 177 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 PHF7Q9BWX1 381 aaPredicted RBP12.64□□□□□ -0.39
VLDLR-202ENST00000382099 TMEM191AQ9H0A3 160 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 TBR1Q16650 682 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 TMEM97Q5BJF2 176 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 DEPPQ9NTK1 212 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 PLEK2Q9NYT0 353 aa12.64□□□□□ -0.39
VLDLR-202ENST00000382099 IGKV1-27A0A075B6S5 117 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 IGKV1-12A0A0C4DH73 117 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 IGKV1D-12P01611 117 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 GDF1P27539 372 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 CAMPP49913 170 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 CCDC144NLQ6NUI1 221 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 C9orf118A6NHY6 69 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 CYC1P08574 325 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 SRFP11831 508 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 CRYBB3P26998 211 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 CX3CL1P78423 397 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 CST6Q15828 149 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 TMEM211Q6ICI0 200 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 LINC00173Q6ZV60 143 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 YAF2Q8IY57 180 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 RP1P56715 2156 aa12.63□□□□□ -0.39
VLDLR-202ENST00000382099 TNRC6AQ8NDV7 1962 aaKnown RBP12.63□□□□□ -0.39
VLDLR-202ENST00000382099 PARM1Q6UWI2 310 aa12.62□□□□□ -0.39
VLDLR-202ENST00000382099 SSBP4Q9BWG4 385 aaPredicted RBP12.62□□□□□ -0.39
VLDLR-202ENST00000382099 A6NDN8 102 aa12.62□□□□□ -0.39
VLDLR-202ENST00000382099 C2orf70A6NJV1 201 aa12.62□□□□□ -0.39
VLDLR-202ENST00000382099 GNG4P50150 75 aa12.62□□□□□ -0.39
VLDLR-202ENST00000382099 GPM6AP51674 278 aa12.62□□□□□ -0.39
VLDLR-202ENST00000382099 PQLC2Q6ZP29 291 aa12.62□□□□□ -0.39
VLDLR-202ENST00000382099 EAF1Q96JC9 268 aaPredicted RBP12.62□□□□□ -0.39
VLDLR-202ENST00000382099 SSBP3Q9BWW4 388 aaPredicted RBP12.62□□□□□ -0.39
VLDLR-202ENST00000382099 HEATR1Q9H583 2144 aaKnown RBP12.62□□□□□ -0.39
VLDLR-202ENST00000382099 GCM1Q9NP62 436 aa12.62□□□□□ -0.39
VLDLR-202ENST00000382099 PNRC2Q9NPJ4 139 aaKnown RBP12.62□□□□□ -0.39
VLDLR-202ENST00000382099 V9GYV3 84 aa12.62□□□□□ -0.39
VLDLR-202ENST00000382099 KNTC1P50748 2209 aa12.62□□□□□ -0.39
VLDLR-202ENST00000382099 M0R135 149 aa12.62□□□□□ -0.39
VLDLR-202ENST00000382099 CD300EQ496F6 205 aaPredicted RBP12.62□□□□□ -0.39
VLDLR-202ENST00000382099 PIGCQ92535 297 aa12.62□□□□□ -0.39
VLDLR-202ENST00000382099 ZNF799Q96GE5 643 aa12.62□□□□□ -0.39
VLDLR-202ENST00000382099 TUSC2O75896 110 aa12.61□□□□□ -0.39
VLDLR-202ENST00000382099 CELA2BP08218 269 aaPredicted RBP12.61□□□□□ -0.39
VLDLR-202ENST00000382099 FOXE3Q13461 319 aa12.61□□□□□ -0.39
VLDLR-202ENST00000382099 OR5A2Q8NGI9 324 aa12.61□□□□□ -0.39
VLDLR-202ENST00000382099 FLVCR1-AS1Q8TAF5 88 aa12.61□□□□□ -0.39
VLDLR-202ENST00000382099 IGKV1-5P01602 117 aa12.61□□□□□ -0.39
VLDLR-202ENST00000382099 PTGDSP41222 190 aa12.61□□□□□ -0.39
VLDLR-202ENST00000382099 DHRS13Q6UX07 377 aa12.61□□□□□ -0.39
VLDLR-202ENST00000382099 C19orf24Q9BVV8 132 aa12.61□□□□□ -0.39
VLDLR-202ENST00000382099 KCNIP1Q9NZI2 227 aa12.61□□□□□ -0.39
VLDLR-202ENST00000382099 OR1A1Q9P1Q5 309 aa12.61□□□□□ -0.39
VLDLR-202ENST00000382099 J3QR89 54 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 F2RL2O00254 374 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 IGFBP2P18065 325 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 MFAP2P55001 183 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 KIR3DS1Q14943 382 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 MRPL21Q7Z2W9 205 aaKnown RBP12.6□□□□□ -0.39
VLDLR-202ENST00000382099 TNFRSF19Q9NS68 423 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 SDK2Q58EX2 2172 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 LOC102723996A0A087X1L8 192 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 LEPROTL1O95214 131 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 CELA3AP09093 270 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 OR8B8Q15620 311 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 PDLIM3Q53GG5 364 aaPredicted RBP12.6□□□□□ -0.39
VLDLR-202ENST00000382099 ATG2AQ2TAZ0 1938 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 A0A1W2PNR3 127 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 TNFSF14O43557 240 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 IGKV1-39P01597 117 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 IGKV1D-39P04432 117 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms