RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 TMEM189A5PLL7 270 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 SMLR1H3BR10 107 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 CDC42EP2O14613 210 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 HSBP1O75506 76 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 SUMO2P61956 95 aaKnown RBP7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 NHLH2Q02577 135 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 C10orf128Q5T292 105 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 DHRS11Q6UWP2 260 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 AQP3Q92482 292 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 C2orf50Q96LR7 162 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 PTPRQQ9UMZ3 2332 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 IGHV2-26A0A0B4J1V2 119 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 IGHV2-70DA0A0C4DH43 119 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 FOXI3A8MTJ6 420 aaPredicted RBP7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 OR5AC1P0C628 307 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 LINC00869P0C866 280 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 CRYBA2P53672 197 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 CACNG7P62955 275 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 SLC35E4Q6ICL7 350 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 ZNF841Q6ZN19 808 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM122BQ7Z309 247 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 CBY1Q9Y3M2 126 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 TMEM187Q14656 261 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 ADIPOQQ15848 244 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 CTF1Q16619 201 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 UMAD1C9J7I0 102 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 ZFPL1O95159 310 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 GCGP01275 180 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 OR5AL1P0C617 328 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 PRSS54Q6PEW0 395 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 SDF2L1Q9HCN8 221 aa7.7□□□□□ -1.18
LIMCH1-202ENST00000381753 CLPSL1A2RUU4 121 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 DLX1P56177 255 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 IL24Q13007 206 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 KIAA0141Q14154 515 aaPredicted RBP7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 TPTE2P1Q5T6R2 138 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 TMUB2Q71RG4 321 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 WFDC12Q8WWY7 111 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 RCHY1Q96PM5 261 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 GRNP28799 593 aaKnown RBP7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 RNF212Q495C1 297 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 RPL39P5Q59GN2 51 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 PEF1Q9UBV8 284 aaKnown RBP7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 U3KQ87 197 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 C17orf51A8MQB3 221 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 VENTXO95231 258 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 SIX6O95475 246 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 PSMB6P28072 239 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 TMEM42Q69YG0 159 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 CENPVL1A0A0U1RR11 272 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 ASPDHA6ND91 283 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 CTAG2O75638 210 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 IGHV3-48P01763 117 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 B2MP61769 119 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 DEFB112Q30KQ8 113 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 SAXO1Q8IYX7 474 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 VPREB3Q9UKI3 123 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 SPTBP11277 2137 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 PIN1P1O15428 100 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 SOCS1O15524 211 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 KBTBD11O94819 623 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 ANOS1P23352 680 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 RIGQ13278 110 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 KIAA0040Q15053 153 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 SIGIRRQ6IA17 410 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 LRRC75A-AS1Q8N1F1 130 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 ANGPTL6Q8NI99 470 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 USMG5Q96IX5 58 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 GEMIN7Q9H840 131 aaKnown RBP7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 CYB5R1Q9UHQ9 305 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 THSD7BQ9C0I4 1608 aa7.69□□□□□ -1.18
LIMCH1-202ENST00000381753 DSPPQ9NZW4 1301 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 TRGV1A0A0A0MS02 117 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 HKR1P10072 659 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 ASAH1Q13510 395 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 IGSF11Q5DX21 431 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 MEIG1Q5JSS6 88 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 MBNL2Q5VZF2 373 aaKnown RBP7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 OSR1Q8TAX0 266 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 MYH15Q9Y2K3 1946 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 CDK2AP2O75956 126 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 UBE2E1P51965 193 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 BTN1A1Q13410 526 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 C17orf82Q86X59 251 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 TMEM229BQ8NBD8 167 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 WFDC11Q8NEX6 87 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 OR51G1Q8NGK1 321 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 OR10G4Q8NGN3 311 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 OR10G9Q8NGN4 311 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 OR10G7Q8NGN6 311 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 SMIM12Q96EX1 92 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 PRO3102Q9H379 93 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 NEU3Q9UQ49 428 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 BRCA1P38398 1863 aaKnown RBP7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 CCL18P55774 89 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 RELL2Q8NC24 303 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 EFNA2O43921 213 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 SMIM18P0DKX4 95 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 FXYD7P58549 80 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 ADAT3Q96EY9 351 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms