RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 TNFRSF19Q9NS68 423 aa10.51□□□□□ -0.73
NPLOC4-202ENST00000374747 KIAA1644Q3SXP7 199 aa10.51□□□□□ -0.73
NPLOC4-202ENST00000374747 NPIPB13A6NJU9 1138 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 NPIPB4C9JG80 1138 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 RBFOX2O43251 390 aaKnown RBP eCLIP10.5□□□□□ -0.731e-8■■■□□ 19
NPLOC4-202ENST00000374747 C1orf185Q5T7R7 199 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 FAM214BQ7L5A3 538 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 ARL6IP6Q8N6S5 226 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 DNAJC4Q9NNZ3 241 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 FAM206AQ9NX38 181 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 CARHSP1Q9Y2V2 147 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 MPDZO75970 2070 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 NPBWR2P48146 333 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 UCP2P55851 309 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 C2orf68Q2NKX9 166 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 SYT8Q8NBV8 401 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 SMIM8Q96KF7 97 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 WFIKKN1Q96NZ8 548 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 TMEM250H0YL14 139 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 CRYBB3P26998 211 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 FHITP49789 147 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 ERVFRD-1P60508 538 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 TMEM187Q14656 261 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 CDCP2Q5VXM1 449 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 MRPL14Q6P1L8 145 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 TCF24Q7RTU0 167 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 GFRA3O60609 400 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 RND2P52198 227 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 ZNF600Q6ZNG1 722 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 DYNLRB2Q8TF09 96 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 MRPL13Q9BYD1 178 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 PKIBQ9C010 78 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 COL4A6Q14031 1691 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 PRR33A8MZF0 331 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 ZG16O60844 167 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 HSPE1P61604 102 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 ZNF506Q5JVG8 444 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 Q96M66 194 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 CCL13Q99616 98 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 PSMG3Q9BT73 122 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 C19orf24Q9BVV8 132 aa10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 PEF1Q9UBV8 284 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 F11RQ9Y624 299 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-202ENST00000374747 FRYQ5TBA9 3013 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 C16orf97H3BN30 126 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 VENTXO95231 258 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 LGALS3P17931 250 aaKnown RBP10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 UCP3P55916 312 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 LOXL3P58215 753 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 P2RY6Q15077 328 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 RIPPLY2Q5TAB7 128 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 FAM53AQ6NSI3 398 aaPredicted RBP10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 ATOH7Q8N100 152 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 SFXN3Q9BWM7 321 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 SHISA3A0PJX4 238 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 TMPRSS3P57727 454 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 HCP5Q6MZN7 132 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 C16orf92Q96LL3 132 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 DIRC2Q96SL1 478 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 NEU1Q99519 415 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 DLL3Q9NYJ7 618 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 MARCH11A6NNE9 402 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 IGHMP01871 453 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 CEACAM1P13688 526 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 EMP1P54849 157 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 HERPUD1Q15011 391 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 C17orf82Q86X59 251 aaPredicted RBP10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 STPG3Q8N7X2 389 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 OR8G5Q8NG78 346 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 SRSF12Q8WXF0 261 aaKnown RBP10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 AUP1Q9Y679 476 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 LHFPL6Q9Y693 200 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 LRRK1Q38SD2 2015 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 WDFY3Q8IZQ1 3526 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 ZNF708P17019 499 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 GFRA1P56159 465 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 CTAG1AP78358 180 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 JOSD1Q15040 202 aaPredicted RBP10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 RAXQ9Y2V3 346 aa10.49□□□□□ -0.73
NPLOC4-202ENST00000374747 SAXO1Q8IYX7 474 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 WDFY4Q6ZS81 3184 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 SPTA1P02549 2419 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 KLF4O43474 513 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 SS18L1O75177 396 aaPredicted RBP10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 ANOS1P23352 680 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 TAS2R60P59551 318 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 EGR4Q05215 589 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 EBLN2Q6P2I7 272 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 METTL26Q96S19 204 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 CHCHD2Q9Y6H1 151 aaPredicted RBP10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 DPRXA6NFQ7 191 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 CA7P43166 264 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 EFNB1P98172 346 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 G6PC2Q9NQR9 355 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 TMEM56-RWDD3S4R434 201 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 C7orf71A4D174 169 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 TMEM14DPA8MWL7 114 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 PRSS2P07478 247 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 PRSS8Q16651 343 aa10.48□□□□□ -0.73
NPLOC4-202ENST00000374747 COPS9Q8WXC6 57 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms