RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 THBS3P49746 956 aa15.39■□□□□ 0.05
USP49-202ENST00000373010 TMEM170AQ8WVE7 144 aa15.39■□□□□ 0.05
USP49-202ENST00000373010 ZCCHC14Q8WYQ9 949 aaKnown RBP15.39■□□□□ 0.05
USP49-202ENST00000373010 C17orf112F2Z3M2 114 aa15.38■□□□□ 0.05
USP49-202ENST00000373010 GCSAMLQ5JQS6 135 aa15.38■□□□□ 0.05
USP49-202ENST00000373010 OR4A47Q6IF82 309 aa15.38■□□□□ 0.05
USP49-202ENST00000373010 RBMS3Q6XE24 437 aaKnown RBP15.38■□□□□ 0.05
USP49-202ENST00000373010 IQCF2Q8IXL9 164 aa15.38■□□□□ 0.05
USP49-202ENST00000373010 Q8WTZ3 238 aa15.38■□□□□ 0.05
USP49-202ENST00000373010 CORO2AQ92828 525 aa15.38■□□□□ 0.05
USP49-202ENST00000373010 MALSU1Q96EH3 234 aa15.38■□□□□ 0.05
USP49-202ENST00000373010 CXCL1P09341 107 aa15.38■□□□□ 0.05
USP49-202ENST00000373010 MYOD1P15172 320 aa15.38■□□□□ 0.05
USP49-202ENST00000373010 MEF2BQ02080 365 aaPredicted RBP15.38■□□□□ 0.05
USP49-202ENST00000373010 RPUSD1Q9UJJ7 312 aaKnown RBP15.38■□□□□ 0.05
USP49-202ENST00000373010 C15orf61A6NNL5 157 aa15.37■□□□□ 0.05
USP49-202ENST00000373010 S100A6P06703 90 aa15.37■□□□□ 0.05
USP49-202ENST00000373010 RPP30P78346 268 aaKnown RBP15.37■□□□□ 0.05
USP49-202ENST00000373010 PMS2P11Q13670 270 aa15.37■□□□□ 0.05
USP49-202ENST00000373010 ELOBQ15370 118 aa15.37■□□□□ 0.05
USP49-202ENST00000373010 PDLIM3Q53GG5 364 aaPredicted RBP15.37■□□□□ 0.05
USP49-202ENST00000373010 WFIKKN1Q96NZ8 548 aa15.37■□□□□ 0.05
USP49-202ENST00000373010 LINC00574Q9H8X3 128 aa15.37■□□□□ 0.05
USP49-202ENST00000373010 PKDREJQ9NTG1 2253 aa15.37■□□□□ 0.05
USP49-202ENST00000373010 C5orf52A6NGY3 159 aa15.37■□□□□ 0.05
USP49-202ENST00000373010 NKX6-3A6NJ46 265 aa15.37■□□□□ 0.05
USP49-202ENST00000373010 PRSS46E5RG02 174 aa15.37■□□□□ 0.05
USP49-202ENST00000373010 FCN3O75636 299 aa15.37■□□□□ 0.05
USP49-202ENST00000373010 RPS10P46783 165 aaKnown RBP15.37■□□□□ 0.05
USP49-202ENST00000373010 SDF2L1Q9HCN8 221 aa15.37■□□□□ 0.05
USP49-202ENST00000373010 SLC25A10Q9UBX3 287 aaPredicted RBP15.37■□□□□ 0.05
USP49-202ENST00000373010 ADGRG4Q8IZF6 3080 aa15.37■□□□□ 0.05
USP49-202ENST00000373010 hADV38S2A0JD32 116 aa15.36■□□□□ 0.05
USP49-202ENST00000373010 PSMB3P49720 205 aa15.36■□□□□ 0.05
USP49-202ENST00000373010 ZNF674Q2M3X9 581 aa15.36■□□□□ 0.05
USP49-202ENST00000373010 WDR25Q64LD2 544 aaPredicted RBP15.36■□□□□ 0.05
USP49-202ENST00000373010 TREML4Q6UXN2 200 aa15.36■□□□□ 0.05
USP49-202ENST00000373010 MS4A5Q9H3V2 200 aa15.36■□□□□ 0.05
USP49-202ENST00000373010 SAP30LQ9HAJ7 183 aa15.36■□□□□ 0.05
USP49-202ENST00000373010 TGIF2-C20orf24A0A0A6YYL0 155 aa15.36■□□□□ 0.05
USP49-202ENST00000373010 K7ENP7 123 aa15.36■□□□□ 0.05
USP49-202ENST00000373010 LY86O95711 162 aa15.36■□□□□ 0.05
USP49-202ENST00000373010 IFNA4P05014 189 aa15.36■□□□□ 0.05
USP49-202ENST00000373010 FAM87AP0C7U9 286 aa15.36■□□□□ 0.05
USP49-202ENST00000373010 ACOT6Q3I5F7 207 aaPredicted RBP15.36■□□□□ 0.05
USP49-202ENST00000373010 SLC25A48Q6ZT89 311 aaKnown RBP15.36■□□□□ 0.05
USP49-202ENST00000373010 DIRC2Q96SL1 478 aa15.36■□□□□ 0.05
USP49-202ENST00000373010 SIRT7Q9NRC8 400 aa15.36■□□□□ 0.05
USP49-202ENST00000373010 KALRNO60229 2985 aa15.36■□□□□ 0.05
USP49-202ENST00000373010 TRAV38-1A0A0B4J264 116 aa15.35■□□□□ 0.05
USP49-202ENST00000373010 CT45A6P0DMU7 189 aa15.35■□□□□ 0.05
USP49-202ENST00000373010 CT45A5P0DMU8 189 aa15.35■□□□□ 0.05
USP49-202ENST00000373010 CT45A7P0DMV0 189 aa15.35■□□□□ 0.05
USP49-202ENST00000373010 CDC34P49427 236 aaPredicted RBP15.35■□□□□ 0.05
USP49-202ENST00000373010 NEUROG1Q92886 237 aa15.35■□□□□ 0.05
USP49-202ENST00000373010 ADTRPQ96IZ2 230 aa15.35■□□□□ 0.05
USP49-202ENST00000373010 LINC00312Q9Y6C7 94 aa15.35■□□□□ 0.05
USP49-202ENST00000373010 B4DEV8 164 aa15.35■□□□□ 0.05
USP49-202ENST00000373010 CYB5BO43169 146 aa15.35■□□□□ 0.05
USP49-202ENST00000373010 CCL3L1P16619 93 aa15.35■□□□□ 0.05
USP49-202ENST00000373010 CCL17Q92583 94 aa15.35■□□□□ 0.05
USP49-202ENST00000373010 RPUSD4Q96CM3 377 aaKnown RBP15.35■□□□□ 0.05
USP49-202ENST00000373010 TMEM14BQ9NUH8 114 aa15.35■□□□□ 0.05
USP49-202ENST00000373010 FOXA2Q9Y261 457 aaPredicted RBP15.35■□□□□ 0.05
USP49-202ENST00000373010 TRGV8A0A0C4DH27 118 aa15.34■□□□□ 0.05
USP49-202ENST00000373010 ZNF98A6NK75 572 aa15.34■□□□□ 0.05
USP49-202ENST00000373010 RPL31P62899 125 aaKnown RBP15.34■□□□□ 0.05
USP49-202ENST00000373010 PNRC1Q12796 327 aaPredicted RBP15.34■□□□□ 0.05
USP49-202ENST00000373010 OR4F5Q8NH21 305 aa15.34■□□□□ 0.05
USP49-202ENST00000373010 OR4F4Q96R69 305 aa15.34■□□□□ 0.05
USP49-202ENST00000373010 MGST2Q99735 147 aa15.34■□□□□ 0.05
USP49-202ENST00000373010 SMIM7Q9BQ49 75 aa15.34■□□□□ 0.05
USP49-202ENST00000373010 HINT2Q9BX68 163 aa15.34■□□□□ 0.05
USP49-202ENST00000373010 TMEM178BH3BS89 294 aa15.34■□□□□ 0.05
USP49-202ENST00000373010 PAGE4O60829 102 aa15.34■□□□□ 0.05
USP49-202ENST00000373010 IGKV1-16P04430 117 aa15.34■□□□□ 0.05
USP49-202ENST00000373010 HSPE1P61604 102 aaKnown RBP15.34■□□□□ 0.05
USP49-202ENST00000373010 RND1Q92730 232 aa15.34■□□□□ 0.05
USP49-202ENST00000373010 SSX3Q99909 188 aa15.34■□□□□ 0.05
USP49-202ENST00000373010 PATZ1Q9HBE1 687 aaKnown RBP15.34■□□□□ 0.05
USP49-202ENST00000373010 PTPRQQ9UMZ3 2332 aa15.33■□□□□ 0.05
USP49-202ENST00000373010 TLN1Q9Y490 2541 aaKnown RBP15.33■□□□□ 0.04
USP49-202ENST00000373010 PPIAL4EA0A075B759 164 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 CXorf65A6NEN9 183 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 PCP4L1A6NKN8 68 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 PPIAL4DF5H284 164 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 YIF1AO95070 293 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 PPIAL4FP0DN26 164 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 LYPD2Q6UXB3 125 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 OR13D1Q8NGV5 346 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 C12orf57Q99622 126 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 MANBALQ9NQG1 85 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 PPIAL4AQ9Y536 164 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 SRRM4A7MD48 611 aaKnown RBP15.33■□□□□ 0.04
USP49-202ENST00000373010 HRASP01112 189 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 OPN1MWP04001 364 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 OPN1MW2P0DN77 364 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 OPN1MW3P0DN78 364 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 FABP9Q0Z7S8 132 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 MIC13Q5XKP0 118 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms