RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 MMDQ15546 238 aa11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 ATOH7Q8N100 152 aa11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 NEUROG1Q92886 237 aa11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 SMAD7O15105 426 aaKnown RBP11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 MRPL14Q6P1L8 145 aaKnown RBP11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 LCTP09848 1927 aa11.4□□□□□ -0.58
RAPGEF1-201ENST00000372189 SYNGR1O43759 233 aa11.4□□□□□ -0.59
RAPGEF1-201ENST00000372189 TMEM222Q9H0R3 208 aa11.4□□□□□ -0.59
RAPGEF1-201ENST00000372189 K7N7A8 449 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 TNFRSF6BO95407 300 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 CELA3AP09093 270 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 COX5BP10606 129 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 CLDN18P56856 261 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 C1orf100Q5SVJ3 147 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 Q6ZT83 130 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 GP6Q9HCN6 339 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 UNC13CQ8NB66 2214 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 A0A1W2PRS3 328 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 ECSCRQ19T08 205 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 TMEM54Q969K7 222 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 KNTC1P50748 2209 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 IGLV1-36A0A0B4J1U3 117 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 KLK2P20151 261 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 H2BFSP57053 126 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 MEF2BQ02080 365 aaPredicted RBP11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 ZFP36L1Q07352 338 aaKnown RBP11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 B9A039 149 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 UMODP07911 640 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 SPACA3Q8IXA5 215 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 WDR31Q8NA23 367 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 TDRD6O60522 2096 aaKnown RBP11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 REG1BP48304 166 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 OCIAD2Q56VL3 154 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 OR2K2Q8NGT1 345 aa11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 KLF14Q8TD94 323 aaPredicted RBP11.39□□□□□ -0.59
RAPGEF1-201ENST00000372189 A0A1W2PPE3 182 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 A8MWV9 139 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 SYNGR3O43761 229 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 OTX1P32242 354 aaPredicted RBP11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 GAGE5Q13069 117 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 GAGE6Q13070 117 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 LAIR2Q6ISS4 152 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 UNQ9370/PRO34162Q6UXP9 181 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 GBGT1Q8N5D6 347 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 GCSAMQ8N6F7 178 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 MYOFQ9NZM1 2061 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 IMMP1LQ96LU5 166 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 TRAV5A0A0B4J249 113 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 RBFOX2O43251 390 aaKnown RBP eCLIP11.38□□□□□ -0.591e-5■■■■□ 19.7
RAPGEF1-201ENST00000372189 IGHMP01871 453 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM106CPP0CH98 169 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 FGF12P61328 243 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 TMEM45BQ96B21 275 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 MARS2Q96GW9 593 aaKnown RBP11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 NPVFQ9HCQ7 196 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 HILPDAQ9Y5L2 63 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 MORN3Q6PF18 240 aaPredicted RBP11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 OR1L8Q8NGR8 309 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 WNT5BQ9H1J7 359 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 THSD7BQ9C0I4 1608 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 NDUFB4O95168 129 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 HPRT1P00492 218 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 ZNF137PP52743 207 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 PLAURQ03405 335 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 ZNF362Q5T0B9 420 aaPredicted RBP11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 DYNLRB2Q8TF09 96 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 PAXXQ9BUH6 204 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 PXMP4Q9Y6I8 212 aa11.38□□□□□ -0.59
RAPGEF1-201ENST00000372189 IGKV1D-42A0A075B6H8 117 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 C1QL1O75973 258 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 OR2A4O95047 310 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 MFAP2P55001 183 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 HIST1H2BAQ96A08 127 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 SNRNP40Q96DI7 357 aaKnown RBP11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 OR2A7Q96R45 310 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 LINC00470Q9BZP3 86 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 LHFPL6Q9Y693 200 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 TIMM23BQ5SRD1 257 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 ZNF826PQ6ZT77 177 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 Q8WTZ3 238 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 PLSCR2Q9NRY7 297 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 ZFC3H1O60293 1989 aaKnown RBP11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 ZNF646O15015 1829 aaPredicted RBP11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 IGHV1-69-2A0A0G2JMI3 117 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 APOBEC3AP31941 199 aaPredicted RBP11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 TMEM144Q7Z5S9 345 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 NPFFR1Q9GZQ6 430 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 TRAV8-1A0A0A6YYK1 113 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 J3QR06 171 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 NTN3O00634 580 aaPredicted RBP11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 OR2H2O95918 312 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 WNT5AP41221 380 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 CSRP3P50461 194 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 OR10J3Q5JRS4 329 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 DUX5Q96PT3 197 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 PRDM14Q9GZV8 571 aa11.37□□□□□ -0.59
RAPGEF1-201ENST00000372189 H0YL77 283 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 J3KT08 172 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 GAGE13Q4V321 117 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 WFDC6Q9BQY6 131 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms