RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 MAP1BP46821 2468 aaKnown RBP23.8■■□□□ 1.4
SSBP3-204ENST00000371320 GVINP1Q7Z2Y8 2422 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 C15orf61A6NNL5 157 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 TMEM250H0YL14 139 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 AP4M1O00189 453 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 MPDU1O75352 247 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 OR4A8P0C604 315 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 TNFRSF1AP19438 455 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 ADIPOQQ15848 244 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 GFRALQ6UXV0 394 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 NAT8Q9UHE5 227 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 CLDN34H7C241 214 aa23.79■■□□□ 1.4
SSBP3-204ENST00000371320 DEFA4P12838 97 aa23.79■■□□□ 1.4
SSBP3-204ENST00000371320 OR4A47Q6IF82 309 aa23.79■■□□□ 1.4
SSBP3-204ENST00000371320 ANKRD11Q6UB99 2663 aaPredicted RBP23.79■■□□□ 1.4
SSBP3-204ENST00000371320 TRGV8A0A0C4DH27 118 aa23.79■■□□□ 1.4
SSBP3-204ENST00000371320 Q8NA96 180 aa23.79■■□□□ 1.4
SSBP3-204ENST00000371320 TMPRSS2O15393 492 aa23.78■■□□□ 1.4
SSBP3-204ENST00000371320 MMP23AO75900 390 aa23.78■■□□□ 1.4
SSBP3-204ENST00000371320 KBTBD11O94819 623 aa23.78■■□□□ 1.4
SSBP3-204ENST00000371320 S100A8P05109 93 aa23.78■■□□□ 1.4
SSBP3-204ENST00000371320 BSPH1Q075Z2 132 aa23.78■■□□□ 1.4
SSBP3-204ENST00000371320 KIAA0141Q14154 515 aaPredicted RBP23.78■■□□□ 1.4
SSBP3-204ENST00000371320 TMEM241Q24JQ0 296 aa23.78■■□□□ 1.4
SSBP3-204ENST00000371320 TMEM30BQ3MIR4 351 aa23.78■■□□□ 1.4
SSBP3-204ENST00000371320 TREML4Q6UXN2 200 aa23.78■■□□□ 1.4
SSBP3-204ENST00000371320 OR4F5Q8NH21 305 aa23.78■■□□□ 1.4
SSBP3-204ENST00000371320 RPUSD4Q96CM3 377 aaKnown RBP23.78■■□□□ 1.4
SSBP3-204ENST00000371320 SNRNP40Q96DI7 357 aaKnown RBP23.78■■□□□ 1.4
SSBP3-204ENST00000371320 OR4F4Q96R69 305 aa23.78■■□□□ 1.4
SSBP3-204ENST00000371320 C17orf100A8MU93 164 aa23.77■■□□□ 1.4
SSBP3-204ENST00000371320 PRSS46E5RG02 174 aa23.77■■□□□ 1.4
SSBP3-204ENST00000371320 SOX15O60248 233 aa23.77■■□□□ 1.4
SSBP3-204ENST00000371320 NDUFB7P17568 137 aa23.77■■□□□ 1.4
SSBP3-204ENST00000371320 TMPRSS3P57727 454 aa23.77■■□□□ 1.4
SSBP3-204ENST00000371320 CYP2G1PQ6ZSU1 146 aa23.77■■□□□ 1.4
SSBP3-204ENST00000371320 RPUSD1Q9UJJ7 312 aaKnown RBP23.77■■□□□ 1.4
SSBP3-204ENST00000371320 FOXA2Q9Y261 457 aaPredicted RBP23.77■■□□□ 1.4
SSBP3-204ENST00000371320 RAI1Q7Z5J4 1906 aaPredicted RBP23.77■■□□□ 1.4
SSBP3-204ENST00000371320 DSCAML1Q8TD84 2053 aa23.77■■□□□ 1.4
SSBP3-204ENST00000371320 hADV38S2A0JD32 116 aa23.77■■□□□ 1.4
SSBP3-204ENST00000371320 NKX6-3A6NJ46 265 aa23.77■■□□□ 1.4
SSBP3-204ENST00000371320 SEC14L6B5MCN3 397 aa23.77■■□□□ 1.4
SSBP3-204ENST00000371320 RND2P52198 227 aa23.77■■□□□ 1.4
SSBP3-204ENST00000371320 GCSAMLQ5JQS6 135 aa23.77■■□□□ 1.4
SSBP3-204ENST00000371320 TMEM170AQ8WVE7 144 aa23.77■■□□□ 1.4
SSBP3-204ENST00000371320 PAGE4O60829 102 aa23.76■■□□□ 1.39
SSBP3-204ENST00000371320 THBDP07204 575 aa23.76■■□□□ 1.39
SSBP3-204ENST00000371320 ADIRFQ15847 76 aa23.76■■□□□ 1.39
SSBP3-204ENST00000371320 CTDSP1Q9GZU7 261 aa23.76■■□□□ 1.39
SSBP3-204ENST00000371320 MS4A5Q9H3V2 200 aa23.76■■□□□ 1.39
SSBP3-204ENST00000371320 TMEM14BQ9NUH8 114 aa23.76■■□□□ 1.39
SSBP3-204ENST00000371320 HRASP01112 189 aa23.75■■□□□ 1.39
SSBP3-204ENST00000371320 HSPE1P61604 102 aaKnown RBP23.75■■□□□ 1.39
SSBP3-204ENST00000371320 ZCCHC24Q8N2G6 241 aaKnown RBP23.75■■□□□ 1.39
SSBP3-204ENST00000371320 ZCCHC14Q8WYQ9 949 aaKnown RBP23.75■■□□□ 1.39
SSBP3-204ENST00000371320 DYSFO75923 2080 aa23.75■■□□□ 1.39
SSBP3-204ENST00000371320 TRAV38-1A0A0B4J264 116 aa23.75■■□□□ 1.39
SSBP3-204ENST00000371320 NDUFS6O75380 124 aaKnown RBP23.75■■□□□ 1.39
SSBP3-204ENST00000371320 OPRK1P41145 380 aa23.75■■□□□ 1.39
SSBP3-204ENST00000371320 SLC25A48Q6ZT89 311 aaKnown RBP23.75■■□□□ 1.39
SSBP3-204ENST00000371320 C1orf87Q8N0U7 546 aa23.75■■□□□ 1.39
SSBP3-204ENST00000371320 TANC2Q9HCD6 1990 aa23.75■■□□□ 1.39
SSBP3-204ENST00000371320 PARLQ9H300 379 aa23.74■■□□□ 1.39
SSBP3-204ENST00000371320 ENY2Q9NPA8 101 aa23.74■■□□□ 1.39
SSBP3-204ENST00000371320 JKAMPQ9P055 326 aa23.74■■□□□ 1.39
SSBP3-204ENST00000371320 LINC00312Q9Y6C7 94 aa23.74■■□□□ 1.39
SSBP3-204ENST00000371320 CUL9Q8IWT3 2517 aa23.74■■□□□ 1.39
SSBP3-204ENST00000371320 A0A1W2PPV4 95 aa23.74■■□□□ 1.39
SSBP3-204ENST00000371320 FAM210BQ96KR6 192 aa23.74■■□□□ 1.39
SSBP3-204ENST00000371320 MGST2Q99735 147 aa23.74■■□□□ 1.39
SSBP3-204ENST00000371320 S100A9P06702 114 aaKnown RBP23.73■■□□□ 1.39
SSBP3-204ENST00000371320 SLC25A10Q9UBX3 287 aaPredicted RBP23.73■■□□□ 1.39
SSBP3-204ENST00000371320 POU2AF1Q16633 256 aa23.72■■□□□ 1.39
SSBP3-204ENST00000371320 RAB1CQ92928 201 aa23.72■■□□□ 1.39
SSBP3-204ENST00000371320 NEIL1Q96FI4 390 aaPredicted RBP23.72■■□□□ 1.39
SSBP3-204ENST00000371320 SSX3Q99909 188 aa23.72■■□□□ 1.39
SSBP3-204ENST00000371320 YIF1AO95070 293 aa23.72■■□□□ 1.39
SSBP3-204ENST00000371320 OPN1MWP04001 364 aa23.72■■□□□ 1.39
SSBP3-204ENST00000371320 OPN1MW2P0DN77 364 aa23.72■■□□□ 1.39
SSBP3-204ENST00000371320 OPN1MW3P0DN78 364 aa23.72■■□□□ 1.39
SSBP3-204ENST00000371320 NPY1RP25929 384 aa23.72■■□□□ 1.39
SSBP3-204ENST00000371320 BSXQ3C1V8 233 aa23.72■■□□□ 1.39
SSBP3-204ENST00000371320 SLC24A4Q8NFF2 622 aa23.72■■□□□ 1.39
SSBP3-204ENST00000371320 GGTLC1Q9BX51 225 aa23.72■■□□□ 1.39
SSBP3-204ENST00000371320 PATZ1Q9HBE1 687 aaKnown RBP23.72■■□□□ 1.39
SSBP3-204ENST00000371320 SSUH2Q9Y2M2 353 aa23.72■■□□□ 1.39
SSBP3-204ENST00000371320 ZNF835Q9Y2P0 537 aa23.72■■□□□ 1.39
SSBP3-204ENST00000371320 SMIM6P0DI80 62 aa23.71■■□□□ 1.39
SSBP3-204ENST00000371320 CT45A6P0DMU7 189 aa23.71■■□□□ 1.39
SSBP3-204ENST00000371320 CT45A5P0DMU8 189 aa23.71■■□□□ 1.39
SSBP3-204ENST00000371320 CT45A7P0DMV0 189 aa23.71■■□□□ 1.39
SSBP3-204ENST00000371320 TET2Q6N021 2002 aaPredicted RBP23.71■■□□□ 1.39
SSBP3-204ENST00000371320 SPACA3Q8IXA5 215 aa23.71■■□□□ 1.39
SSBP3-204ENST00000371320 TCEAL7Q9BRU2 100 aa23.71■■□□□ 1.39
SSBP3-204ENST00000371320 GAL3ST2Q9H3Q3 398 aa23.71■■□□□ 1.39
SSBP3-204ENST00000371320 SAP30LQ9HAJ7 183 aa23.71■■□□□ 1.39
SSBP3-204ENST00000371320 NPVFQ9HCQ7 196 aa23.71■■□□□ 1.39
SSBP3-204ENST00000371320 OR51B2Q9Y5P1 312 aa23.71■■□□□ 1.39
SSBP3-204ENST00000371320 PXMP4Q9Y6I8 212 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms