RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.52□□□□□ -0.24
COL17A1-202ENST00000369733 F11RQ9Y624 299 aaKnown RBP13.52□□□□□ -0.24
COL17A1-202ENST00000369733 IGKV1D-8A0A087WSZ0 117 aa13.52□□□□□ -0.25
COL17A1-202ENST00000369733 ARF6P62330 175 aa13.52□□□□□ -0.25
COL17A1-202ENST00000369733 ZNF146Q15072 292 aa13.52□□□□□ -0.25
COL17A1-202ENST00000369733 WBP1LQ9NX94 342 aa13.52□□□□□ -0.25
COL17A1-202ENST00000369733 TRAV9-1A0A075B6T8 112 aa13.52□□□□□ -0.25
COL17A1-202ENST00000369733 ST6GALNAC3Q8NDV1 305 aa13.52□□□□□ -0.25
COL17A1-202ENST00000369733 PATE3B3GLJ2 98 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 ADMP35318 185 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 DLX1P56177 255 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 FAM214BQ7L5A3 538 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 DOCK4Q8N1I0 1966 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 STARD6P59095 220 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 PCSK4Q6UW60 755 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 OR4D5Q8NGN0 318 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 ANK1P16157 1881 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 FOXA3P55318 350 aaPredicted RBP13.51□□□□□ -0.25
COL17A1-202ENST00000369733 SUPT4H1P63272 117 aaKnown RBP13.51□□□□□ -0.25
COL17A1-202ENST00000369733 OR51G1Q8NGK1 321 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 KLF14Q8TD94 323 aaPredicted RBP13.51□□□□□ -0.25
COL17A1-202ENST00000369733 ITLN1Q8WWA0 313 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 LYZL4Q96KX0 146 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 IDI2-AS1Q9NZ38 188 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 UNC13CQ8NB66 2214 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 PPIAL4EA0A075B759 164 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 IGHV3-72A0A0B4J1Y9 119 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 PPIAL4DF5H284 164 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 PPIAL4FP0DN26 164 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 CCL1P22362 96 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 C1orf210Q8IVY1 113 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 PPIAL4AQ9Y536 164 aa13.51□□□□□ -0.25
COL17A1-202ENST00000369733 IGKV1D-13A0A0B4J2D9 117 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 KLK10O43240 276 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 SNCGO76070 127 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 IGKV1-13P0DP09 117 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 ADCYAP1P18509 176 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 ST6GALNAC6Q969X2 333 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 MRPL13Q9BYD1 178 aaKnown RBP13.5□□□□□ -0.25
COL17A1-202ENST00000369733 CHRNA10Q9GZZ6 450 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 MTCL1Q9Y4B5 1905 aaKnown RBP13.5□□□□□ -0.25
COL17A1-202ENST00000369733 C17orf98A8MV24 154 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 LIPFP07098 398 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 FAM19A2Q8N3H0 131 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 C1QTNF9BB2RNN3 333 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 B4E171 279 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 H3BTX0 84 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 TSPAN7P41732 249 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 CCL8P80075 99 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 RAB1CQ92928 201 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 CA7P43166 264 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 TMUB1Q9BVT8 246 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 TMEM106BQ9NUM4 274 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 LAMTOR2Q9Y2Q5 125 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 CHCHD2Q9Y6H1 151 aaPredicted RBP13.5□□□□□ -0.25
COL17A1-202ENST00000369733 TMEM238LA0A1B0GVL6 79 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 A6NJY4 79 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 C12orf77C9JDV5 145 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 MC5RP33032 325 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 GATAD1Q8WUU5 269 aa13.5□□□□□ -0.25
COL17A1-202ENST00000369733 LDLRAD4O15165 306 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 C1QTNF9P0C862 333 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 TMEM136Q6ZRR5 245 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 LHFPL1Q86WI0 220 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 ZNF502Q8TBZ5 544 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 ZNF319Q9P2F9 582 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 LOC107984156A0A0G2JMH3 177 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 TIAF1O95411 115 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 CD3EP07766 207 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 ARL17AQ8IVW1 177 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 FLVCR1-AS1Q8TAF5 88 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 SMIM12Q96EX1 92 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 MS4A5Q9H3V2 200 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 NRN1Q9NPD7 142 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 TMEM242Q9NWH2 141 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 NDUFS6O75380 124 aaKnown RBP13.49□□□□□ -0.25
COL17A1-202ENST00000369733 AMBPP02760 352 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 CFHR5Q9BXR6 569 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 DOCK3Q8IZD9 2030 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 ID3Q02535 119 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 RPL39P5Q59GN2 51 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 ZNF837Q96EG3 531 aaPredicted RBP13.49□□□□□ -0.25
COL17A1-202ENST00000369733 HIST1H4GQ99525 98 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 MAP1LC3AQ9H492 121 aa13.49□□□□□ -0.25
COL17A1-202ENST00000369733 TRBV24-1A0A075B6N3 115 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 FAM90A27PA6NNH2 459 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 M0R3E3 92 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 MAFAQ8NHW3 353 aaPredicted RBP13.48□□□□□ -0.25
COL17A1-202ENST00000369733 ALKBH7Q9BT30 221 aaPredicted RBP13.48□□□□□ -0.25
COL17A1-202ENST00000369733 A0A1B0GW64 132 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 NUDT3O95989 172 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 SIP14410 1827 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 SCN8AQ9UQD0 1980 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 IGFBP2P18065 325 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 ZNF324BQ6AW86 544 aaPredicted RBP13.48□□□□□ -0.25
COL17A1-202ENST00000369733 NIT1Q86X76 327 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 DEFB123Q8N688 67 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 LRTM2Q8N967 370 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 NPIPB3Q92617 1050 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 RAB1BQ9H0U4 201 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms