RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 TRAV3A0A0B4J244 114 aa17.54■□□□□ 0.4
HOXA4-201ENST00000360046 FAM90A9PA6NNJ1 464 aa17.54■□□□□ 0.4
HOXA4-201ENST00000360046 SNAPC5O75971 98 aa17.54■□□□□ 0.4
HOXA4-201ENST00000360046 MBPP02686 304 aaPredicted RBP17.54■□□□□ 0.4
HOXA4-201ENST00000360046 FAM106CPP0CH98 169 aa17.54■□□□□ 0.4
HOXA4-201ENST00000360046 NKX2-1P43699 371 aaPredicted RBP17.54■□□□□ 0.4
HOXA4-201ENST00000360046 NDUFA5Q16718 116 aa17.54■□□□□ 0.4
HOXA4-201ENST00000360046 CXorf66Q5JRM2 361 aaPredicted RBP17.54■□□□□ 0.4
HOXA4-201ENST00000360046 FAM120AOSQ5T036 256 aa17.54■□□□□ 0.4
HOXA4-201ENST00000360046 VSTM2AQ8TAG5 236 aa17.54■□□□□ 0.4
HOXA4-201ENST00000360046 C22orf15Q8WYQ4 148 aa17.54■□□□□ 0.4
HOXA4-201ENST00000360046 G3V3Q6 166 aa17.53■□□□□ 0.4
HOXA4-201ENST00000360046 PITX3O75364 302 aa17.53■□□□□ 0.4
HOXA4-201ENST00000360046 KBTBD11O94819 623 aa17.53■□□□□ 0.4
HOXA4-201ENST00000360046 MPC2O95563 127 aa17.53■□□□□ 0.4
HOXA4-201ENST00000360046 LY6G6DO95868 133 aa17.53■□□□□ 0.4
HOXA4-201ENST00000360046 C1QBP02746 253 aa17.53■□□□□ 0.4
HOXA4-201ENST00000360046 UBE2KP61086 200 aa17.53■□□□□ 0.4
HOXA4-201ENST00000360046 MMDQ15546 238 aa17.53■□□□□ 0.4
HOXA4-201ENST00000360046 PUSL1Q8N0Z8 303 aaKnown RBP17.53■□□□□ 0.4
HOXA4-201ENST00000360046 RNF5Q99942 180 aa17.53■□□□□ 0.4
HOXA4-201ENST00000360046 MEGF9Q9H1U4 602 aa17.53■□□□□ 0.4
HOXA4-201ENST00000360046 BET1LQ9NYM9 111 aa17.53■□□□□ 0.4
HOXA4-201ENST00000360046 SONP18583 2426 aaKnown RBP17.53■□□□□ 0.4
HOXA4-201ENST00000360046 TRAV14DV4A0A0A6YYC5 116 aa17.52■□□□□ 0.4
HOXA4-201ENST00000360046 TMEM11P17152 192 aa17.52■□□□□ 0.4
HOXA4-201ENST00000360046 RELBQ01201 579 aa17.52■□□□□ 0.4
HOXA4-201ENST00000360046 FBLN7Q53RD9 439 aa17.52■□□□□ 0.4
HOXA4-201ENST00000360046 MAGT1Q9H0U3 335 aa17.52■□□□□ 0.4
HOXA4-201ENST00000360046 ST8SIA3O43173 380 aa17.52■□□□□ 0.39
HOXA4-201ENST00000360046 PET100P0DJ07 73 aa17.52■□□□□ 0.39
HOXA4-201ENST00000360046 PSG5Q15238 335 aa17.52■□□□□ 0.39
HOXA4-201ENST00000360046 BCL6BQ8N143 479 aaPredicted RBP17.52■□□□□ 0.39
HOXA4-201ENST00000360046 TEX29Q8N6K0 151 aa17.52■□□□□ 0.39
HOXA4-201ENST00000360046 THAP6Q8TBB0 222 aa17.52■□□□□ 0.39
HOXA4-201ENST00000360046 QTRT1Q9BXR0 403 aaKnown RBP17.52■□□□□ 0.39
HOXA4-201ENST00000360046 FXYD6-FXYD2A0A087WZ82 144 aa17.51■□□□□ 0.39
HOXA4-201ENST00000360046 K7EPK0 472 aa17.51■□□□□ 0.39
HOXA4-201ENST00000360046 UPK2O00526 184 aa17.51■□□□□ 0.39
HOXA4-201ENST00000360046 SRP14P37108 136 aaKnown RBP17.51■□□□□ 0.39
HOXA4-201ENST00000360046 F2RL1P55085 397 aa17.51■□□□□ 0.39
HOXA4-201ENST00000360046 EBI3Q14213 229 aa17.51■□□□□ 0.39
HOXA4-201ENST00000360046 FAM71E2Q8N5Q1 922 aa17.51■□□□□ 0.39
HOXA4-201ENST00000360046 SSX3Q99909 188 aa17.51■□□□□ 0.39
HOXA4-201ENST00000360046 TPSG1Q9NRR2 321 aa17.51■□□□□ 0.39
HOXA4-201ENST00000360046 ZFP57Q9NU63 452 aa17.51■□□□□ 0.39
HOXA4-201ENST00000360046 METTL1Q9UBP6 276 aaKnown RBP17.51■□□□□ 0.39
HOXA4-201ENST00000360046 POMT1Q9Y6A1 747 aa17.51■□□□□ 0.39
HOXA4-201ENST00000360046 MDFIC2A0A1B0GVS7 189 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 C15orf61A6NNL5 157 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 WRBO00258 174 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 RGS13O14921 159 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 NBR2O15453 112 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 FOSL1P15407 271 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 POLR2GP62487 172 aaKnown RBP eCLIP17.5■□□□□ 0.39
HOXA4-201ENST00000360046 ID3Q02535 119 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 PLGLAQ15195 96 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 LRRC75BQ2VPJ9 315 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 C11orf87Q6NUJ2 197 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 CLEC9AQ6UXN8 241 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 NOXA1Q86UR1 476 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 THNSL2Q86YJ6 484 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 OR4A5Q8NH83 315 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 TMEM167AQ8TBQ9 72 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 KIAA1456Q9P272 454 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 MBD2Q9UBB5 411 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 ZFHX3Q15911 3703 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 NAV3Q8IVL0 2385 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 TNCP24821 2201 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 SSSCA1O60232 199 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 SPDEFO95238 335 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 RLN2P04090 185 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 IL6RP08887 468 aaPredicted RBP17.5■□□□□ 0.39
HOXA4-201ENST00000360046 DYNLT3P51808 116 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 DEFB112Q30KQ8 113 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 TEX45Q8NA69 505 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 OR11H4Q8NGC9 324 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 FBXL15Q9H469 300 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 PRNDQ9UKY0 176 aa17.5■□□□□ 0.39
HOXA4-201ENST00000360046 RCL1Q9Y2P8 373 aaKnown RBP17.5■□□□□ 0.39
HOXA4-201ENST00000360046 NCBP2LA6PVI3 153 aaKnown RBP17.49■□□□□ 0.39
HOXA4-201ENST00000360046 RRHO14718 337 aa17.49■□□□□ 0.39
HOXA4-201ENST00000360046 IFNA17P01571 189 aa17.49■□□□□ 0.39
HOXA4-201ENST00000360046 HNF1AP20823 631 aa17.49■□□□□ 0.39
HOXA4-201ENST00000360046 NKX2-5P52952 324 aaPredicted RBP17.49■□□□□ 0.39
HOXA4-201ENST00000360046 RPL8P62917 257 aaKnown RBP17.49■□□□□ 0.39
HOXA4-201ENST00000360046 TNFRSF9Q07011 255 aa17.49■□□□□ 0.39
HOXA4-201ENST00000360046 C9orf139Q6ZV77 190 aa17.49■□□□□ 0.39
HOXA4-201ENST00000360046 Q8N6K4 173 aa17.49■□□□□ 0.39
HOXA4-201ENST00000360046 OR5AC2Q9NZP5 309 aa17.49■□□□□ 0.39
HOXA4-201ENST00000360046 HSPB7Q9UBY9 170 aa17.49■□□□□ 0.39
HOXA4-201ENST00000360046 FOXA2Q9Y261 457 aaPredicted RBP17.49■□□□□ 0.39
HOXA4-201ENST00000360046 TET2Q6N021 2002 aaPredicted RBP17.48■□□□□ 0.39
HOXA4-201ENST00000360046 FAM90A26D6RGX4 464 aa17.48■□□□□ 0.39
HOXA4-201ENST00000360046 H0YIZ8 118 aa17.48■□□□□ 0.39
HOXA4-201ENST00000360046 H3BUX3 64 aa17.48■□□□□ 0.39
HOXA4-201ENST00000360046 DEDDO75618 318 aa17.48■□□□□ 0.39
HOXA4-201ENST00000360046 SPINK9Q5DT21 86 aa17.48■□□□□ 0.39
HOXA4-201ENST00000360046 PRSS54Q6PEW0 395 aa17.48■□□□□ 0.39
HOXA4-201ENST00000360046 Q71RC1 249 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms