RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 SPATA2Q9UM82 520 aa12.27□□□□□ -0.45
H3F3C-201ENST00000340398 PRELID3BQ9Y3B1 194 aa12.27□□□□□ -0.45
H3F3C-201ENST00000340398 ZNF320A2RRD8 509 aa12.26□□□□□ -0.45
H3F3C-201ENST00000340398 AREGP15514 252 aa12.26□□□□□ -0.45
H3F3C-201ENST00000340398 DTYMKP23919 212 aa12.26□□□□□ -0.45
H3F3C-201ENST00000340398 SLC25A42Q86VD7 318 aa12.26□□□□□ -0.45
H3F3C-201ENST00000340398 GPHB5Q86YW7 130 aa12.26□□□□□ -0.45
H3F3C-201ENST00000340398 CCDC140Q96MF4 163 aa12.26□□□□□ -0.45
H3F3C-201ENST00000340398 OR2A7Q96R45 310 aa12.26□□□□□ -0.45
H3F3C-201ENST00000340398 SLC2A9Q9NRM0 540 aa12.26□□□□□ -0.45
H3F3C-201ENST00000340398 TECRQ9NZ01 308 aaKnown RBP12.26□□□□□ -0.45
H3F3C-201ENST00000340398 ZNF257Q9Y2Q1 563 aa12.26□□□□□ -0.45
H3F3C-201ENST00000340398 DPPA5A6NC42 116 aa12.25□□□□□ -0.45
H3F3C-201ENST00000340398 NPIPB5A8MRT5 1133 aa12.25□□□□□ -0.45
H3F3C-201ENST00000340398 LGALS9O00182 355 aa12.25□□□□□ -0.45
H3F3C-201ENST00000340398 CREBL2O60519 120 aaPredicted RBP12.25□□□□□ -0.45
H3F3C-201ENST00000340398 REG1AP05451 166 aa12.25□□□□□ -0.45
H3F3C-201ENST00000340398 MYL9P24844 172 aa12.25□□□□□ -0.45
H3F3C-201ENST00000340398 RPL27AP46776 148 aaKnown RBP12.25□□□□□ -0.45
H3F3C-201ENST00000340398 EIF4EBP1Q13541 118 aaPredicted RBP12.25□□□□□ -0.45
H3F3C-201ENST00000340398 HACD4Q5VWC8 232 aa12.25□□□□□ -0.45
H3F3C-201ENST00000340398 C22orf42Q6IC83 251 aa12.25□□□□□ -0.45
H3F3C-201ENST00000340398 SSX9Q7RTT3 188 aa12.25□□□□□ -0.45
H3F3C-201ENST00000340398 TMEM61Q8N0U2 210 aa12.25□□□□□ -0.45
H3F3C-201ENST00000340398 MFSD4AQ8N468 514 aa12.25□□□□□ -0.45
H3F3C-201ENST00000340398 UXS1Q8NBZ7 420 aa12.25□□□□□ -0.45
H3F3C-201ENST00000340398 NUDCD2Q8WVJ2 157 aa12.25□□□□□ -0.45
H3F3C-201ENST00000340398 TCTEX1D2Q8WW35 142 aa12.25□□□□□ -0.45
H3F3C-201ENST00000340398 CENPOQ9BU64 300 aa12.25□□□□□ -0.45
H3F3C-201ENST00000340398 MLXQ9UH92 298 aa12.25□□□□□ -0.45
H3F3C-201ENST00000340398 MRPS7Q9Y2R9 242 aaKnown RBP12.25□□□□□ -0.45
H3F3C-201ENST00000340398 TRDV1A0A1B0GX56 115 aa12.24□□□□□ -0.45
H3F3C-201ENST00000340398 TMEM213A2RRL7 107 aa12.24□□□□□ -0.45
H3F3C-201ENST00000340398 KBTBD11O94819 623 aa12.24□□□□□ -0.45
H3F3C-201ENST00000340398 SCAF4O95104 1147 aaKnown RBP12.24□□□□□ -0.45
H3F3C-201ENST00000340398 ZNF735P0CB33 412 aa12.24□□□□□ -0.45
H3F3C-201ENST00000340398 ARL3P36405 182 aa12.24□□□□□ -0.45
H3F3C-201ENST00000340398 TM4SF20Q53R12 229 aa12.24□□□□□ -0.45
H3F3C-201ENST00000340398 ZNF57Q68EA5 555 aaPredicted RBP12.24□□□□□ -0.45
H3F3C-201ENST00000340398 PUSL1Q8N0Z8 303 aaKnown RBP12.24□□□□□ -0.45
H3F3C-201ENST00000340398 TMEM167AQ8TBQ9 72 aa12.24□□□□□ -0.45
H3F3C-201ENST00000340398 TAS2R8Q9NYW2 309 aa12.24□□□□□ -0.45
H3F3C-201ENST00000340398 TMEM235A6NFC5 223 aa12.23□□□□□ -0.45
H3F3C-201ENST00000340398 CGB1A6NKQ9 187 aa12.23□□□□□ -0.45
H3F3C-201ENST00000340398 SSX5O60225 188 aa12.23□□□□□ -0.45
H3F3C-201ENST00000340398 CRYGCP07315 174 aa12.23□□□□□ -0.45
H3F3C-201ENST00000340398 CTXN2P0C2S0 81 aa12.23□□□□□ -0.45
H3F3C-201ENST00000340398 PTHLHP12272 177 aa12.23□□□□□ -0.45
H3F3C-201ENST00000340398 CD36P16671 472 aa12.23□□□□□ -0.45
H3F3C-201ENST00000340398 PSMB6P28072 239 aa12.23□□□□□ -0.45
H3F3C-201ENST00000340398 TBCEQ15813 527 aaPredicted RBP12.23□□□□□ -0.45
H3F3C-201ENST00000340398 CNIH2Q6PI25 160 aa12.23□□□□□ -0.45
H3F3C-201ENST00000340398 ZNF367Q7RTV3 350 aa12.23□□□□□ -0.45
H3F3C-201ENST00000340398 CNBD2Q96M20 576 aa12.23□□□□□ -0.45
H3F3C-201ENST00000340398 OVOL2Q9BRP0 275 aa12.23□□□□□ -0.45
H3F3C-201ENST00000340398 NDUFB11Q9NX14 153 aa12.23□□□□□ -0.45
H3F3C-201ENST00000340398 MFSD2BA6NFX1 497 aa12.22□□□□□ -0.45
H3F3C-201ENST00000340398 TNFSF12O43508 249 aa12.22□□□□□ -0.45
H3F3C-201ENST00000340398 SLC22A5O76082 557 aa12.22□□□□□ -0.45
H3F3C-201ENST00000340398 CLEC3BP05452 202 aa12.22□□□□□ -0.45
H3F3C-201ENST00000340398 CTRB1P17538 263 aa12.22□□□□□ -0.45
H3F3C-201ENST00000340398 FAM106AQ4KMX7 169 aa12.22□□□□□ -0.45
H3F3C-201ENST00000340398 CTRB2Q6GPI1 263 aa12.22□□□□□ -0.45
H3F3C-201ENST00000340398 UNQ9165/PRO28630Q6UXU0 137 aa12.22□□□□□ -0.45
H3F3C-201ENST00000340398 SLC16A13Q7RTY0 426 aa12.22□□□□□ -0.45
H3F3C-201ENST00000340398 OR52B4Q8NGK2 314 aa12.22□□□□□ -0.45
H3F3C-201ENST00000340398 OR4S2Q8NH73 311 aa12.22□□□□□ -0.45
H3F3C-201ENST00000340398 EEF1AKMT3Q96AZ1 226 aa12.22□□□□□ -0.45
H3F3C-201ENST00000340398 HSD17B10Q99714 261 aaKnown RBP12.22□□□□□ -0.45
H3F3C-201ENST00000340398 DCSTAMPQ9H295 470 aa12.22□□□□□ -0.45
H3F3C-201ENST00000340398 IGHV3-35A0A0C4DH35 117 aa12.21□□□□□ -0.45
H3F3C-201ENST00000340398 MAS1LP35410 378 aa12.21□□□□□ -0.45
H3F3C-201ENST00000340398 ARL6IP1Q15041 203 aa12.21□□□□□ -0.45
H3F3C-201ENST00000340398 FAM209BQ5JX69 171 aa12.21□□□□□ -0.45
H3F3C-201ENST00000340398 BTNL8Q6UX41 500 aa12.21□□□□□ -0.45
H3F3C-201ENST00000340398 VSTM2AQ8TAG5 236 aa12.21□□□□□ -0.45
H3F3C-201ENST00000340398 CCL28Q9NRJ3 127 aa12.21□□□□□ -0.45
H3F3C-201ENST00000340398 ANXA10Q9UJ72 324 aa12.21□□□□□ -0.45
H3F3C-201ENST00000340398 LOC102724200A0A096LPH7 203 aaPredicted RBP12.2□□□□□ -0.46
H3F3C-201ENST00000340398 TRAV3A0A0B4J244 114 aa12.2□□□□□ -0.46
H3F3C-201ENST00000340398 DEFA4P12838 97 aa12.2□□□□□ -0.46
H3F3C-201ENST00000340398 GNG2P59768 71 aa12.2□□□□□ -0.46
H3F3C-201ENST00000340398 RPL8P62917 257 aaKnown RBP12.2□□□□□ -0.46
H3F3C-201ENST00000340398 EWSR1Q01844 656 aaKnown RBP eCLIP12.2□□□□□ -0.46
H3F3C-201ENST00000340398 ZNF585BQ52M93 769 aa12.2□□□□□ -0.46
H3F3C-201ENST00000340398 GGTLC1Q9BX51 225 aa12.2□□□□□ -0.46
H3F3C-201ENST00000340398 DAPK2Q9UIK4 370 aa12.2□□□□□ -0.46
H3F3C-201ENST00000340398 FRAS1Q86XX4 4008 aa12.2□□□□□ -0.46
H3F3C-201ENST00000340398 IGLV11-55A0A075B6I3 123 aa12.19□□□□□ -0.46
H3F3C-201ENST00000340398 ERICH4A6NGS2 130 aa12.19□□□□□ -0.46
H3F3C-201ENST00000340398 NOTOA8MTQ0 251 aa12.19□□□□□ -0.46
H3F3C-201ENST00000340398 HRASP01112 189 aa12.19□□□□□ -0.46
H3F3C-201ENST00000340398 FCER2P06734 321 aa12.19□□□□□ -0.46
H3F3C-201ENST00000340398 HLA-GP17693 338 aa12.19□□□□□ -0.46
H3F3C-201ENST00000340398 KLK9Q2XQG4 91 aa12.19□□□□□ -0.46
H3F3C-201ENST00000340398 OR4A47Q6IF82 309 aa12.19□□□□□ -0.46
H3F3C-201ENST00000340398 ZNF773Q6PK81 442 aa12.19□□□□□ -0.46
H3F3C-201ENST00000340398 ZNF66Q6ZN08 573 aa12.19□□□□□ -0.46
H3F3C-201ENST00000340398 GVQW1Q8N7I0 195 aa12.19□□□□□ -0.46
H3F3C-201ENST00000340398 SECTM1Q8WVN6 248 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms