RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 SSX9Q7RTT3 188 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 C1orf174Q8IYL3 243 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 GBGT1Q8N5D6 347 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 CNEP1R1Q8N9A8 125 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 C9orf106Q8NAJ2 232 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 OR4A16Q8NH70 328 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 DDB2Q92466 427 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 C1orf159Q96HA4 380 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 LOXL4Q96JB6 756 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 IFI27L2Q9H2X8 130 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 FZR1Q9UM11 496 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 PXMP4Q9Y6I8 212 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 IGHV1-18A0A0C4DH31 117 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 M0R1X1 148 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 AQP7O14520 342 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 MGST3O14880 152 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 CXorf1O96002 111 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 SP9P0CG40 484 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 GCH1P30793 250 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 KIR2DS2P43631 304 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 SSTP61278 116 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 MZT1Q08AG7 82 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 EDDM3AQ14507 147 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 FAM169BQ8N8A8 192 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 BEND2Q8NDZ0 799 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 SFRP2Q96HF1 295 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 C2orf88Q9BSF0 95 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 NDUFAF3Q9BU61 184 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 PATZ1Q9HBE1 687 aaKnown RBP7.19□□□□□ -1.26
CLK1-201ENST00000321356 HEYLQ9NQ87 328 aaPredicted RBP7.19□□□□□ -1.26
CLK1-201ENST00000321356 GNG12Q9UBI6 72 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 TRAV3A0A0B4J244 114 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 A0A1B0GV90 55 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 PRR33A8MZF0 331 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 ITGB1BP1O14713 200 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 SLC31A2O15432 143 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 CGB3P0DN86 165 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 CGB7P0DN87 165 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 BMP5P22003 454 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 ZNF134P52741 427 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 YPEL3P61236 119 aaPredicted RBP7.19□□□□□ -1.26
CLK1-201ENST00000321356 ERVK-16P61578 105 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 LTC4SQ16873 150 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 RPL39P5Q59GN2 51 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 MIC13Q5XKP0 118 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 VKORC1L1Q8N0U8 176 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 OR5T1Q8NG75 326 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 PLSCR4Q9NRQ2 329 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 TMEM140Q9NV12 185 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 AURKAIP1Q9NWT8 199 aaPredicted RBP7.19□□□□□ -1.26
CLK1-201ENST00000321356 ELOVL5Q9NYP7 299 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 TCF19Q9Y242 345 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 DSCAML1Q8TD84 2053 aa7.19□□□□□ -1.26
CLK1-201ENST00000321356 A0A0U1RQK1 487 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 SCO2A0A1W2PP80 73 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 ZNF320A2RRD8 509 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 PGPEP1LA6NFU8 196 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 C15orf61A6NNL5 157 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 TIMP3P35625 211 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 TAS2R60P59551 318 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 SSX2Q16385 188 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 MSMPQ1L6U9 139 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 ARSJQ5FYB0 599 aaPredicted RBP7.18□□□□□ -1.26
CLK1-201ENST00000321356 TEX38Q6PEX7 206 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 IGFL2Q6UWQ7 119 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 C1orf229Q6ZS94 237 aaPredicted RBP7.18□□□□□ -1.26
CLK1-201ENST00000321356 ABHD12Q8N2K0 398 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 GCSAMQ8N6F7 178 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 SGMS2Q8NHU3 365 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 PPP1R35Q8TAP8 253 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 C11orf52Q96A22 123 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 S1PR3Q99500 378 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 TMEM204Q9BSN7 226 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 NCOR1P1Q9H4R4 102 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 DUSP13Q9UII6 198 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 YTHDF2Q9Y5A9 579 aaKnown RBP7.18□□□□□ -1.26
CLK1-201ENST00000321356 TRAPPC1Q9Y5R8 145 aa7.18□□□□□ -1.26
CLK1-201ENST00000321356 INTS1Q8N201 2190 aaKnown RBP7.18□□□□□ -1.26
CLK1-201ENST00000321356 TRAV9-1A0A075B6T8 112 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 MDFIC2A0A1B0GVS7 189 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 TNFSF13O75888 250 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 IL6RP08887 468 aaPredicted RBP7.17□□□□□ -1.26
CLK1-201ENST00000321356 GCHFRP30047 84 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 RAB4BP61018 213 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 IQCJQ1A5X6 159 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.17□□□□□ -1.26
CLK1-201ENST00000321356 OR2Z1Q8NG97 314 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 OR4S2Q8NH73 311 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 PLPPR2Q96GM1 343 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 OPN3Q9H1Y3 402 aaPredicted RBP7.17□□□□□ -1.26
CLK1-201ENST00000321356 NPVFQ9HCQ7 196 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 ZNF71Q9NQZ8 489 aaPredicted RBP7.17□□□□□ -1.26
CLK1-201ENST00000321356 TMEM14BQ9NUH8 114 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 CALYQ9NYX4 217 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 FOXA2Q9Y261 457 aaPredicted RBP7.17□□□□□ -1.26
CLK1-201ENST00000321356 TP53TG5Q9Y2B4 290 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 HEATR1Q9H583 2144 aaKnown RBP7.17□□□□□ -1.26
CLK1-201ENST00000321356 PCNX2A6NKB5 2137 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 ZNF705GA8MUZ8 300 aaPredicted RBP7.17□□□□□ -1.26
CLK1-201ENST00000321356 C9JCJ5 164 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms