RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SERF2P84101 59 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 ATP5G2Q06055 141 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 TSPO2Q5TGU0 170 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 GAPTQ8N292 157 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 FAM169BQ8N8A8 192 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 OR8B12Q8NGG6 310 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 NABP1Q96AH0 204 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 SPAG8Q99932 426 aaPredicted RBP5.58□□□□□ -1.52
ZNF540-201ENST00000316433 MBNL3Q9NUK0 354 aaKnown RBP5.58□□□□□ -1.52
ZNF540-201ENST00000316433 GTF3C1Q12789 2109 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 hDV102S1A0JD36 115 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 TUSC2O75896 110 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 MT-ND6P03923 174 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 GLI4P10075 376 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 FABP2P12104 132 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 GNG3P63215 75 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 ACSM6Q6P461 480 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 ZNF439Q8NDP4 499 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 OR13H1Q8NG92 308 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 OR10D3Q8NH80 312 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 SPIN2AQ99865 258 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 SPIN2BQ9BPZ2 258 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 C1QTNF4Q9BXJ3 329 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 NGBQ9NPG2 151 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 IL36BQ9NZH7 164 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 B4GALT7Q9UBV7 327 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 EML6Q6ZMW3 1958 aa5.58□□□□□ -1.52
ZNF540-201ENST00000316433 IGKV1-9A0A0C4DH69 117 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 C2orf70A6NJV1 201 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 NKX2-8O15522 239 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 TMEM50AO95807 157 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 APOA2P02652 100 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 NPPCP23582 126 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 CD27P26842 260 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 REG1BP48304 166 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 LGALS4P56470 323 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 TTC9CQ8N5M4 171 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 ZNF611Q8N823 705 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 OR10G8Q8NGN5 311 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 CCL4L1Q8NHW4 92 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 GATAD1Q8WUU5 269 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 CRIM1Q9NZV1 1036 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 NAT8BQ9UHF3 227 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 ANXA10Q9UJ72 324 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 ZNF835Q9Y2P0 537 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 KBTBD11-OT1A0A1B0GTJ5 212 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 DEGS1O15121 323 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 CER1O95813 267 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 SRIP30626 198 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 KIR3DS1Q14943 382 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 PRR31Q5SQ13 230 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 UEVLDQ8IX04 471 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 TSACCQ96A04 125 aaPredicted RBP5.57□□□□□ -1.52
ZNF540-201ENST00000316433 ZNF257Q9Y2Q1 563 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 KIF26BQ2KJY2 2108 aa5.57□□□□□ -1.52
ZNF540-201ENST00000316433 PHF3Q92576 2039 aaKnown RBP5.57□□□□□ -1.52
ZNF540-201ENST00000316433 FAM90A26D6RGX4 464 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 H7C1C5 153 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 M0R2Z0 102 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 FRMD6-AS1P0C7T7 363 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 GCSAMLQ5JQS6 135 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 CXorf66Q5JRM2 361 aaPredicted RBP5.56□□□□□ -1.52
ZNF540-201ENST00000316433 FAM27BQ5VT28 67 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 GLIPR1L1Q6UWM5 242 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 C2orf91Q6ZV80 131 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 ZNF114Q8NC26 417 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 GJC3Q8NFK1 279 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 OR51T1Q8NGJ9 327 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 GLMPQ8WWB7 406 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 LSM10Q969L4 123 aaKnown RBP5.56□□□□□ -1.52
ZNF540-201ENST00000316433 TMEM70Q9BUB7 260 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 OR2D2Q9H210 308 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 HES4Q9HCC6 221 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 NXT1Q9UKK6 140 aaKnown RBP5.56□□□□□ -1.52
ZNF540-201ENST00000316433 CENPFP49454 3210 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 IGKV1D-8A0A087WSZ0 117 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 PHF1O43189 567 aaPredicted RBP5.56□□□□□ -1.52
ZNF540-201ENST00000316433 HSBP1O75506 76 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 PHLDA2Q53GA4 152 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 BPIFA4PQ86YQ2 179 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 TPRX1Q8N7U7 411 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 OR5D13Q8NGL4 314 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 OR1F12Q8NHA8 337 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 TMEM190Q8WZ59 177 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 GCM1Q9NP62 436 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 DOCK11Q5JSL3 2073 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 MPDZO75970 2070 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 C11orf94C9JXX5 98 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 ADAM20O43506 726 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 WIPF1O43516 503 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 PAGE4O60829 102 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 HLA-DQA2P01906 255 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 STATHP02808 62 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 PVRP15151 417 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 OR1D5P58170 312 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 NXPH1P58417 271 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 LRRC75BQ2VPJ9 315 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 SPATA46Q5T0L3 261 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 OTPQ5XKR4 325 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 SHISA6Q6ZSJ9 500 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms