RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 VMA21Q3ZAQ7 101 aa18.16■□□□□ 0.5
IRF3-201ENST00000309877 PUSL1Q8N0Z8 303 aaKnown RBP18.16■□□□□ 0.5
IRF3-201ENST00000309877 NUP50Q9UKX7 468 aa18.16■□□□□ 0.5
IRF3-201ENST00000309877 PRNDQ9UKY0 176 aa18.16■□□□□ 0.5
IRF3-201ENST00000309877 FAM24AA6NFZ4 105 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 C15orf61A6NNL5 157 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 NPFFO15130 113 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 TMEM50AO95807 157 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 IL6RP08887 468 aaPredicted RBP18.15■□□□□ 0.5
IRF3-201ENST00000309877 AARDQ4LEZ3 155 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 ZNF429Q86V71 674 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 OR52E5Q8NH55 327 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 MALSU1Q96EH3 234 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 ARPC5LQ9BPX5 153 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 SLC25A31Q9H0C2 315 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 LYRM2Q9NU23 88 aaPredicted RBP18.15■□□□□ 0.5
IRF3-201ENST00000309877 ABCA12Q86UK0 2595 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 ASH1LQ9NR48 2969 aaKnown RBP18.15■□□□□ 0.5
IRF3-201ENST00000309877 SAA4P35542 130 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 PAX9P55771 341 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 SPCS3P61009 180 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 KRTAP1-3Q8IUG1 177 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 SMIM8Q96KF7 97 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 PSENENQ9NZ42 101 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 FOXA2Q9Y261 457 aaPredicted RBP18.15■□□□□ 0.5
IRF3-201ENST00000309877 WSB1Q9Y6I7 421 aa18.15■□□□□ 0.5
IRF3-201ENST00000309877 KBTBD11O94819 623 aa18.14■□□□□ 0.49
IRF3-201ENST00000309877 IGLV2-23P01705 113 aa18.14■□□□□ 0.49
IRF3-201ENST00000309877 PAX6P26367 422 aa18.14■□□□□ 0.49
IRF3-201ENST00000309877 TAS2R30P59541 319 aa18.14■□□□□ 0.49
IRF3-201ENST00000309877 SPINK9Q5DT21 86 aa18.14■□□□□ 0.49
IRF3-201ENST00000309877 OR4A5Q8NH83 315 aa18.14■□□□□ 0.49
IRF3-201ENST00000309877 DTD1Q8TEA8 209 aa18.14■□□□□ 0.49
IRF3-201ENST00000309877 C17orf50Q8WW18 174 aa18.14■□□□□ 0.49
IRF3-201ENST00000309877 RITA1Q96K30 269 aa18.14■□□□□ 0.49
IRF3-201ENST00000309877 TSNAXQ99598 290 aaKnown RBP18.14■□□□□ 0.49
IRF3-201ENST00000309877 TMEM14BQ9NUH8 114 aa18.14■□□□□ 0.49
IRF3-201ENST00000309877 OR51B2Q9Y5P1 312 aa18.14■□□□□ 0.49
IRF3-201ENST00000309877 GCN1Q92616 2671 aaKnown RBP18.14■□□□□ 0.49
IRF3-201ENST00000309877 NAV2Q8IVL1 2488 aa18.14■□□□□ 0.49
IRF3-201ENST00000309877 IGHV1-69DA0A0B4J2H0 117 aa18.13■□□□□ 0.49
IRF3-201ENST00000309877 VENTXO95231 258 aa18.13■□□□□ 0.49
IRF3-201ENST00000309877 IGHV1-69P01742 117 aa18.13■□□□□ 0.49
IRF3-201ENST00000309877 DYNAPQ8N1N2 210 aa18.13■□□□□ 0.49
IRF3-201ENST00000309877 OR8H1Q8NGG4 311 aa18.13■□□□□ 0.49
IRF3-201ENST00000309877 CFHR4Q92496 578 aa18.13■□□□□ 0.49
IRF3-201ENST00000309877 CIB3Q96Q77 187 aaPredicted RBP18.13■□□□□ 0.49
IRF3-201ENST00000309877 CLCC1Q96S66 551 aa18.13■□□□□ 0.49
IRF3-201ENST00000309877 RNF5Q99942 180 aa18.13■□□□□ 0.49
IRF3-201ENST00000309877 FKBP11Q9NYL4 201 aa18.13■□□□□ 0.49
IRF3-201ENST00000309877 H3BP45 60 aa18.12■□□□□ 0.49
IRF3-201ENST00000309877 SLC25A17O43808 307 aa18.12■□□□□ 0.49
IRF3-201ENST00000309877 TGFAP01135 160 aa18.12■□□□□ 0.49
IRF3-201ENST00000309877 EWSR1Q01844 656 aaKnown RBP eCLIP18.12■□□□□ 0.49
IRF3-201ENST00000309877 HABP2Q14520 560 aaPredicted RBP18.12■□□□□ 0.49
IRF3-201ENST00000309877 SLC51BQ86UW2 128 aa18.12■□□□□ 0.49
IRF3-201ENST00000309877 TMEM252Q8N6L7 170 aa18.12■□□□□ 0.49
IRF3-201ENST00000309877 ZDHHC16Q969W1 377 aa18.12■□□□□ 0.49
IRF3-201ENST00000309877 ZNF471Q9BX82 626 aaPredicted RBP18.12■□□□□ 0.49
IRF3-201ENST00000309877 ABCA2Q9BZC7 2435 aa18.12■□□□□ 0.49
IRF3-201ENST00000309877 APCP25054 2843 aa18.12■□□□□ 0.49
IRF3-201ENST00000309877 WNK2Q9Y3S1 2297 aa18.12■□□□□ 0.49
IRF3-201ENST00000309877 IGHV3OR16-10A0A075B7F0 116 aa18.12■□□□□ 0.49
IRF3-201ENST00000309877 TRAV40A0A0B4J280 105 aa18.12■□□□□ 0.49
IRF3-201ENST00000309877 IGSF23A1L1A6 192 aa18.12■□□□□ 0.49
IRF3-201ENST00000309877 HSPE1P61604 102 aaKnown RBP18.12■□□□□ 0.49
IRF3-201ENST00000309877 CLEC9AQ6UXN8 241 aa18.12■□□□□ 0.49
IRF3-201ENST00000309877 TMEM167AQ8TBQ9 72 aa18.12■□□□□ 0.49
IRF3-201ENST00000309877 TCF19Q9Y242 345 aa18.12■□□□□ 0.49
IRF3-201ENST00000309877 CSMD2Q7Z408 3487 aa18.11■□□□□ 0.49
IRF3-201ENST00000309877 TAAR5O14804 337 aa18.11■□□□□ 0.49
IRF3-201ENST00000309877 IGKV1D-33P01593 117 aa18.11■□□□□ 0.49
IRF3-201ENST00000309877 IGKV1-33P01594 117 aa18.11■□□□□ 0.49
IRF3-201ENST00000309877 RPL8P62917 257 aaKnown RBP18.11■□□□□ 0.49
IRF3-201ENST00000309877 TMEM249Q2WGJ8 235 aa18.11■□□□□ 0.49
IRF3-201ENST00000309877 PDLIM3Q53GG5 364 aaPredicted RBP18.11■□□□□ 0.49
IRF3-201ENST00000309877 SPANXN5Q5MJ07 72 aa18.11■□□□□ 0.49
IRF3-201ENST00000309877 TEX45Q8NA69 505 aa18.11■□□□□ 0.49
IRF3-201ENST00000309877 LY86O95711 162 aa18.1■□□□□ 0.49
IRF3-201ENST00000309877 MOSP00540 346 aa18.1■□□□□ 0.49
IRF3-201ENST00000309877 FGF2P09038 288 aa18.1■□□□□ 0.49
IRF3-201ENST00000309877 IGHV4-31P0DP07 118 aa18.1■□□□□ 0.49
IRF3-201ENST00000309877 NHLH2Q02577 135 aa18.1■□□□□ 0.49
IRF3-201ENST00000309877 HES1Q14469 280 aa18.1■□□□□ 0.49
IRF3-201ENST00000309877 PSG5Q15238 335 aa18.1■□□□□ 0.49
IRF3-201ENST00000309877 STX12Q86Y82 276 aa18.1■□□□□ 0.49
IRF3-201ENST00000309877 PIP4P2Q8N4L2 257 aa18.1■□□□□ 0.49
IRF3-201ENST00000309877 AJUBAQ96IF1 538 aa18.1■□□□□ 0.49
IRF3-201ENST00000309877 SMIM3Q9BZL3 60 aa18.1■□□□□ 0.49
IRF3-201ENST00000309877 ENY2Q9NPA8 101 aa18.1■□□□□ 0.49
IRF3-201ENST00000309877 FBXL17Q9UF56 701 aa18.1■□□□□ 0.49
IRF3-201ENST00000309877 ZNF257Q9Y2Q1 563 aa18.1■□□□□ 0.49
IRF3-201ENST00000309877 J3QLI3 93 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 CD24P25063 80 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 CNTFRP26992 372 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 HOXA1P49639 335 aaPredicted RBP18.09■□□□□ 0.49
IRF3-201ENST00000309877 BAXQ07812 192 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 HNF4GQ14541 408 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 RUSC1-AS1Q66K80 236 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 TEX261Q6UWH6 196 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms