RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 CD81P60033 236 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 HERPUD1Q15011 391 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 ZNF146Q15072 292 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 COX19Q49B96 90 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 ZNF837Q96EG3 531 aaPredicted RBP11.04□□□□□ -0.64
ABR-202ENST00000302538 ZMAT5Q9UDW3 170 aaKnown RBP11.04□□□□□ -0.64
ABR-202ENST00000302538 LINC00312Q9Y6C7 94 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 LOC389332A0A1B0GUA5 103 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 IQCF6A8MYZ5 107 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 PNRC1Q12796 327 aaPredicted RBP11.03□□□□□ -0.64
ABR-202ENST00000302538 ABLIM2Q6H8Q1 611 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 GTSCR1Q86UQ5 136 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 DRAM1Q8N682 238 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 THADAQ6YHU6 1953 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 HMSDA8MTL9 139 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 C9JCJ5 164 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 CCL3L1P16619 93 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
ABR-202ENST00000302538 OR51G1Q8NGK1 321 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 DUX3Q96PT4 197 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 C12orf77C9JDV5 145 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 M0R3E3 92 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 CEACAM4O75871 244 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 MIXL1Q9H2W2 232 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 COTL1Q14019 142 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 AANATQ16613 207 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 OR4A47Q6IF82 309 aa11.03□□□□□ -0.64
ABR-202ENST00000302538 OSR1Q8TAX0 266 aaPredicted RBP11.03□□□□□ -0.64
ABR-202ENST00000302538 IGHV1-18A0A0C4DH31 117 aa11.02□□□□□ -0.64
ABR-202ENST00000302538 B4DSR2 109 aa11.02□□□□□ -0.64
ABR-202ENST00000302538 SRD5A1P18405 259 aa11.02□□□□□ -0.64
ABR-202ENST00000302538 VAMP3Q15836 100 aa11.02□□□□□ -0.64
ABR-202ENST00000302538 ZNF343Q6P1L6 599 aa11.02□□□□□ -0.64
ABR-202ENST00000302538 OR13A1Q8NGR1 328 aa11.02□□□□□ -0.64
ABR-202ENST00000302538 OR1N2Q8NGR9 330 aa11.02□□□□□ -0.64
ABR-202ENST00000302538 C21orf62Q9NYP8 219 aa11.02□□□□□ -0.64
ABR-202ENST00000302538 CHD5Q8TDI0 1954 aa11.02□□□□□ -0.64
ABR-202ENST00000302538 RUNX1Q01196 453 aa11.02□□□□□ -0.65
ABR-202ENST00000302538 SRSF9Q13242 221 aaKnown RBP eCLIP11.02□□□□□ -0.65
ABR-202ENST00000302538 OR8A1Q8NGG7 326 aa11.02□□□□□ -0.65
ABR-202ENST00000302538 PARD6AQ9NPB6 346 aa11.02□□□□□ -0.65
ABR-202ENST00000302538 FOXA2Q9Y261 457 aaPredicted RBP11.02□□□□□ -0.65
ABR-202ENST00000302538 ARHGEF17Q96PE2 2063 aaPredicted RBP11.02□□□□□ -0.65
ABR-202ENST00000302538 HLA-DRB5Q30154 266 aa11.02□□□□□ -0.65
ABR-202ENST00000302538 C17orf82Q86X59 251 aaPredicted RBP11.02□□□□□ -0.65
ABR-202ENST00000302538 FAM131CQ96AQ9 280 aa11.02□□□□□ -0.65
ABR-202ENST00000302538 LINC01587Q99440 93 aa11.02□□□□□ -0.65
ABR-202ENST00000302538 C1QTNF5Q9BXJ0 243 aa11.02□□□□□ -0.65
ABR-202ENST00000302538 OPN4Q9UHM6 478 aa11.02□□□□□ -0.65
ABR-202ENST00000302538 IGHV3OR16-8A0A075B7F1 116 aa11.02□□□□□ -0.65
ABR-202ENST00000302538 AMY1AP04745 511 aa11.02□□□□□ -0.65
ABR-202ENST00000302538 ZNF672Q499Z4 452 aaPredicted RBP11.02□□□□□ -0.65
ABR-202ENST00000302538 FAM90A1Q86YD7 464 aa11.02□□□□□ -0.65
ABR-202ENST00000302538 MRPL20Q9BYC9 149 aaKnown RBP11.02□□□□□ -0.65
ABR-202ENST00000302538 CKAP5Q14008 2032 aa11.02□□□□□ -0.65
ABR-202ENST00000302538 FOXI3A8MTJ6 420 aaPredicted RBP11.01□□□□□ -0.65
ABR-202ENST00000302538 A8MWL6 223 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 MYOD1P15172 320 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 TNFRSF9Q07011 255 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 C12orf54Q6X4T0 127 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 SELENOHQ8IZQ5 122 aaKnown RBP11.01□□□□□ -0.65
ABR-202ENST00000302538 WDR81Q562E7 1941 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 MMP9P14780 707 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 BTF3P20290 206 aaKnown RBP11.01□□□□□ -0.65
ABR-202ENST00000302538 CD24P25063 80 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 DHRS11Q6UWP2 260 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 PQLC2Q6ZP29 291 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 STHQ8IWL8 128 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 FLVCR1-AS1Q8TAF5 88 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 MESP1Q9BRJ9 268 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 TRGV2A0A075B6R0 118 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 IGKV1D-43A0A0B4J1Z2 117 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 J3QR89 54 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 FAM24BQ8N5W8 94 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 TMEM252Q8N6L7 170 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 GPR82Q96P67 336 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 MAP1LC3CQ9BXW4 147 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 OR51M1Q9H341 326 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 TRBV5-7A0A0A0MS05 114 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 ERVH48-1M5A8F1 160 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 APCSP02743 223 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 IER3P46695 156 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 SERF2P84101 59 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 LINC01590Q5TEZ4 76 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 ANGPTL6Q8NI99 470 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 CHAC2Q8WUX2 184 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 GSX1Q9H4S2 264 aaPredicted RBP11.01□□□□□ -0.65
ABR-202ENST00000302538 V9GYH0 126 aa11.01□□□□□ -0.65
ABR-202ENST00000302538 K7ENP7 123 aa11□□□□□ -0.65
ABR-202ENST00000302538 ZNF818PQ6ZRF7 136 aa11□□□□□ -0.65
ABR-202ENST00000302538 WNT2P09544 360 aa11□□□□□ -0.65
ABR-202ENST00000302538 C8orf88P0DMB2 117 aa11□□□□□ -0.65
ABR-202ENST00000302538 FAM74A3Q4VXF1 159 aa11□□□□□ -0.65
ABR-202ENST00000302538 ZNF880Q6PDB4 577 aa11□□□□□ -0.65
ABR-202ENST00000302538 ZNF502Q8TBZ5 544 aa11□□□□□ -0.65
ABR-202ENST00000302538 COL4A6Q14031 1691 aa11□□□□□ -0.65
ABR-202ENST00000302538 C5orf52A6NGY3 159 aa11□□□□□ -0.65
ABR-202ENST00000302538 NPFFO15130 113 aa11□□□□□ -0.65
ABR-202ENST00000302538 NBR2O15453 112 aa11□□□□□ -0.65
ABR-202ENST00000302538 AICDAQ9GZX7 198 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms