RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 JMJD8Q96S16 334 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 TCRBV4S1A1TA0A5B7 111 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 INSL4Q14641 139 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 RNF182Q8N6D2 247 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 TRAV30A0A087WSZ9 112 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 IGHV5-10-1A0A0J9YXX1 117 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 NPIPB8E9PQR5 432 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 TOMM40O96008 361 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 ASIPP42127 132 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 VDAC2P45880 294 aaPredicted RBP10.4□□□□□ -0.74
PCF11-201ENST00000298281 ORAOV1Q8WV07 137 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 HOXB1P14653 301 aaPredicted RBP10.4□□□□□ -0.74
PCF11-201ENST00000298281 MGST3O14880 152 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 LHFPL4Q7Z7J7 247 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 MS4A6AQ9H2W1 248 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 RCC2Q9P258 522 aaKnown RBP10.4□□□□□ -0.74
PCF11-201ENST00000298281 PRSS23O95084 383 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 FAM3BP58499 235 aaPredicted RBP10.4□□□□□ -0.74
PCF11-201ENST00000298281 GCSAMQ8N6F7 178 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 FGF11Q92914 225 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 ANAPC10Q9UM13 185 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 A0A0U1RRA0 63 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 LRTM2Q8N967 370 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 GLMPQ8WWB7 406 aa10.4□□□□□ -0.74
PCF11-201ENST00000298281 IGHV3-48P01763 117 aa10.4□□□□□ -0.75
PCF11-201ENST00000298281 TANC2Q9HCD6 1990 aa10.4□□□□□ -0.75
PCF11-201ENST00000298281 KBTBD11-OT1A0A1B0GTJ5 212 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 P2RY4P51582 365 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 FXYD3Q14802 87 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 SFTA2Q6UW10 78 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 HOGA1Q86XE5 327 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 OR11H12B2RN74 326 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 FOXH1O75593 365 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 RPS11P62280 158 aaKnown RBP eCLIP10.39□□□□□ -0.75
PCF11-201ENST00000298281 OR11H1Q8NG94 326 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 OR11H2Q8NH07 326 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 AHRRA9YTQ3 701 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 PCOLCEQ15113 449 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 FAM27BQ5VT28 67 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 PMCHL2Q9BQD1 86 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 PPIAL4CA0A0B4J2A2 164 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 NGFRP08138 427 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 PPIAL4GP0DN37 164 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 CD33P20138 364 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 RPL8P62917 257 aaKnown RBP10.39□□□□□ -0.75
PCF11-201ENST00000298281 ZP4Q12836 540 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 NHSQ6T4R5 1651 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 LNP1A1A4G5 178 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 CCL3P10147 92 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 NPC2P61916 151 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 TFF2Q03403 129 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 PMCHL1Q16048 86 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 TMEM30BQ3MIR4 351 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 WDR82Q6UXN9 313 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 VCX2Q9H322 139 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 TMEM50BP56557 158 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 CLEC7AQ9BXN2 247 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 SCN7AQ01118 1682 aa10.39□□□□□ -0.75
PCF11-201ENST00000298281 NDUFB4O95168 129 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 SLC25A34Q6PIV7 304 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 ZNF414Q96IQ9 312 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 LCN2P80188 198 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 ANXA2RQ3ZCQ2 193 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 TCF23Q7RTU1 214 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 MRPL18Q9H0U6 180 aaKnown RBP10.38□□□□□ -0.75
PCF11-201ENST00000298281 C7orf77A4D0Y5 90 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 TMEM50AO95807 157 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 CCL4P13236 92 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 BHLHA9Q7RTU4 235 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 YBX2Q9Y2T7 364 aaKnown RBP10.38□□□□□ -0.75
PCF11-201ENST00000298281 TRAV8-4A0A0B4J246 113 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 NKX2-6A6NCS4 301 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 VWC2LB2RUY7 222 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 NPIPB4C9JG80 1138 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 C5orf67F2Z3F1 127 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 CELA2BP08218 269 aaPredicted RBP10.38□□□□□ -0.75
PCF11-201ENST00000298281 RTN4RL2Q86UN3 420 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 MMD2Q8IY49 270 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 A0A087WX48 190 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 LOXL4Q96JB6 756 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 H3BQ15 152 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 DLL1O00548 723 aa10.38□□□□□ -0.75
PCF11-201ENST00000298281 PEAR1Q5VY43 1037 aaPredicted RBP10.37□□□□□ -0.75
PCF11-201ENST00000298281 GOLT1AQ6ZVE7 132 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 PAPPAQ13219 1627 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 CLDND2Q8NHS1 167 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 H3BTX0 84 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 CYB5R3P00387 301 aaPredicted RBP10.37□□□□□ -0.75
PCF11-201ENST00000298281 CHCHD5Q9BSY4 110 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 TUBGCP6Q96RT7 1819 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 FAM90A10PA6NDY2 464 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 FAM90A18PA6NE21 464 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 FAM90A16PA6NEW6 464 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 FAM90A20PA6NIJ5 464 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 FAM90A8PA6NJQ4 464 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 FAM90A7PA6NKC0 464 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 FAM90A22PA8MWA6 464 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 FAM90A12PA8MX19 464 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 FAM90A5PA8MXJ8 464 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 FAM90A23PA8MXZ1 464 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms