RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 RPL29P47914 159 aaKnown RBP5.86□□□□□ -1.47
GAPVD1-202ENST00000297933 C1orf100Q5SVJ3 147 aa5.86□□□□□ -1.47
GAPVD1-202ENST00000297933 LDLRAD2Q5SZI1 272 aa5.86□□□□□ -1.47
GAPVD1-202ENST00000297933 ZNF880Q6PDB4 577 aa5.86□□□□□ -1.47
GAPVD1-202ENST00000297933 PQLC2Q6ZP29 291 aa5.86□□□□□ -1.47
GAPVD1-202ENST00000297933 V9GYH0 126 aa5.86□□□□□ -1.47
GAPVD1-202ENST00000297933 ASCC3Q8N3C0 2202 aaKnown RBP5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 C2orf83Q53S99 150 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 TBX15Q96SF7 602 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 SH3BGRL3Q9H299 93 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 WNT2P09544 360 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 SEC11BP0C7V7 166 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 IBA57Q5T440 356 aaKnown RBP5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 CLDND2Q8NHS1 167 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 MRAP2Q96G30 205 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 WFIKKN1Q96NZ8 548 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 GPHA2Q96T91 129 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 C1QTNF5Q9BXJ0 243 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 MRPL32Q9BYC8 188 aaKnown RBP5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 IGHV1-18A0A0C4DH31 117 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 TGFBR3LH3BV60 316 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 RNASE1P07998 156 aaKnown RBP5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 ZNF818PQ6ZRF7 136 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 H1FOOQ8IZA3 346 aaPredicted RBP5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 WFDC6Q9BQY6 131 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 MRPL20Q9BYC9 149 aaKnown RBP5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 DEPPQ9NTK1 212 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 TNFRSF18Q9Y5U5 241 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 TRBV5-7A0A0A0MS05 114 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 PINLYPA6NC86 204 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 NBR2O15453 112 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 SRD5A1P18405 259 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 RUNX1Q01196 453 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 PRB3Q04118 309 aaPredicted RBP5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 MEIG1Q5JSS6 88 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 ABLIM2Q6H8Q1 611 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 RAB37Q96AX2 223 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 PGLYRP4Q96LB8 373 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 NEU1Q99519 415 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 ATG101Q9BSB4 218 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 MAP1LC3AQ9H492 121 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 PCM1Q15154 2024 aa5.85□□□□□ -1.47
GAPVD1-202ENST00000297933 TRAV34A0A0B4J273 112 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 B4DSR2 109 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 H7C1H1 209 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 CD74P04233 296 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 MFAP2P55001 183 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 ATP5IP56385 69 aaPredicted RBP5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 SAMD13Q5VXD3 122 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 CYP2G1PQ6ZSU1 146 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 LINC00305Q7Z4B0 112 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 TMEM252Q8N6L7 170 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 C19orf24Q9BVV8 132 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 GEMIN7Q9H840 131 aaKnown RBP5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 FAM74A7A6NL05 159 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 GCGP01275 180 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 TAS2R60P59551 318 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 ST6GAL2Q96JF0 529 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 CACNA1CQ13936 2221 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 SAP30O75446 220 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 CA2P00918 260 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 TMEM177Q53S58 311 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 ZCCHC24Q8N2G6 241 aaKnown RBP5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 OR10D4PQ8NGN7 298 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 COPS9Q8WXC6 57 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 SRSF12Q8WXF0 261 aaKnown RBP5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 TAF15Q92804 592 aaKnown RBP eCLIP5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 CDC42EP3Q9UKI2 254 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 ZFP30Q9Y2G7 519 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 KNTC1P50748 2209 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 C12orf77C9JDV5 145 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 CCL3L1P16619 93 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 CIRBPQ14011 172 aaKnown RBP5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 SMUG1Q53HV7 270 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 FAM209BQ5JX69 171 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 ZNF385CQ66K41 422 aaPredicted RBP5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 KIR2DL4Q99706 377 aa5.84□□□□□ -1.47
GAPVD1-202ENST00000297933 TUBGCP6Q96RT7 1819 aa5.84□□□□□ -1.48
GAPVD1-202ENST00000297933 NDUFB4O95168 129 aa5.84□□□□□ -1.48
GAPVD1-202ENST00000297933 RNASE4P34096 147 aaKnown RBP5.84□□□□□ -1.48
GAPVD1-202ENST00000297933 ASIPP42127 132 aa5.84□□□□□ -1.48
GAPVD1-202ENST00000297933 AWAT1Q58HT5 328 aa5.84□□□□□ -1.48
GAPVD1-202ENST00000297933 ASPHD2Q6ICH7 369 aa5.84□□□□□ -1.48
GAPVD1-202ENST00000297933 GOLT1AQ6ZVE7 132 aa5.84□□□□□ -1.48
GAPVD1-202ENST00000297933 SMIM12Q96EX1 92 aa5.84□□□□□ -1.48
GAPVD1-202ENST00000297933 RPRMQ9NS64 109 aa5.84□□□□□ -1.48
GAPVD1-202ENST00000297933 GPR132Q9UNW8 380 aa5.84□□□□□ -1.48
GAPVD1-202ENST00000297933 PSMB11A5LHX3 300 aa5.83□□□□□ -1.48
GAPVD1-202ENST00000297933 H3BVH4 76 aa5.83□□□□□ -1.48
GAPVD1-202ENST00000297933 FOXF2Q12947 444 aa5.83□□□□□ -1.48
GAPVD1-202ENST00000297933 ZNF672Q499Z4 452 aaPredicted RBP5.83□□□□□ -1.48
GAPVD1-202ENST00000297933 CLRN3Q8NCR9 226 aa5.83□□□□□ -1.48
GAPVD1-202ENST00000297933 TMEM167AQ8TBQ9 72 aa5.83□□□□□ -1.48
GAPVD1-202ENST00000297933 WNT10AQ9GZT5 417 aa5.83□□□□□ -1.48
GAPVD1-202ENST00000297933 TMEM133Q9H2Q1 129 aa5.83□□□□□ -1.48
GAPVD1-202ENST00000297933 FUT9Q9Y231 359 aa5.83□□□□□ -1.48
GAPVD1-202ENST00000297933 PSME4Q14997 1843 aa5.83□□□□□ -1.48
GAPVD1-202ENST00000297933 ERVH48-1M5A8F1 160 aa5.83□□□□□ -1.48
GAPVD1-202ENST00000297933 SLC25A16P16260 332 aa5.83□□□□□ -1.48
GAPVD1-202ENST00000297933 LGALS3P17931 250 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms