RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 IFNA7P01567 189 aa10.5□□□□□ -0.73
VAMP7-201ENST00000262640 IFNA17P01571 189 aa10.5□□□□□ -0.73
VAMP7-201ENST00000262640 EWSR1Q01844 656 aaKnown RBP eCLIP10.5□□□□□ -0.73
VAMP7-201ENST00000262640 Q5PR19 223 aa10.5□□□□□ -0.73
VAMP7-201ENST00000262640 CCDC144NLQ6NUI1 221 aa10.5□□□□□ -0.73
VAMP7-201ENST00000262640 LHFPL4Q7Z7J7 247 aa10.5□□□□□ -0.73
VAMP7-201ENST00000262640 TMEM252Q8N6L7 170 aa10.5□□□□□ -0.73
VAMP7-201ENST00000262640 OR4A5Q8NH83 315 aa10.5□□□□□ -0.73
VAMP7-201ENST00000262640 RBMXL1Q96E39 390 aaKnown RBP10.5□□□□□ -0.73
VAMP7-201ENST00000262640 TMEM14BQ9NUH8 114 aa10.5□□□□□ -0.73
VAMP7-201ENST00000262640 PSENENQ9NZ42 101 aa10.5□□□□□ -0.73
VAMP7-201ENST00000262640 DOPEY2Q9Y3R5 2298 aa10.5□□□□□ -0.73
VAMP7-201ENST00000262640 CELSR2Q9HCU4 2923 aa10.5□□□□□ -0.73
VAMP7-201ENST00000262640 HELZ2Q9BYK8 2649 aaKnown RBP10.49□□□□□ -0.73
VAMP7-201ENST00000262640 CEBPZOSA8MTT3 80 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 BAXQ07812 192 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 VMA21Q3ZAQ7 101 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 PRSS57Q6UWY2 283 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 ZNF680Q8NEM1 530 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 DTD1Q8TEA8 209 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 FBXL17Q9UF56 701 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 NUP50Q9UKX7 468 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 HILPDAQ9Y5L2 63 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 TRAV20A0A0B4J274 112 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 TIMM23O14925 209 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 KBTBD11O94819 623 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 IGLV2-23P01705 113 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 CD1BP29016 333 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 LOXL1Q08397 574 aaPredicted RBP10.49□□□□□ -0.73
VAMP7-201ENST00000262640 RNF5Q99942 180 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 CYTL1Q9NRR1 136 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 FKBP11Q9NYL4 201 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 PAIP2BQ9ULR5 123 aaKnown RBP10.49□□□□□ -0.73
VAMP7-201ENST00000262640 PTPN13Q12923 2485 aa10.49□□□□□ -0.73
VAMP7-201ENST00000262640 SPDEFO95238 335 aa10.48□□□□□ -0.73
VAMP7-201ENST00000262640 GATA3P23771 443 aa10.48□□□□□ -0.73
VAMP7-201ENST00000262640 HSPE1P61604 102 aaKnown RBP10.48□□□□□ -0.73
VAMP7-201ENST00000262640 HABP2Q14520 560 aaPredicted RBP10.48□□□□□ -0.73
VAMP7-201ENST00000262640 STX12Q86Y82 276 aa10.48□□□□□ -0.73
VAMP7-201ENST00000262640 STOML3Q8TAV4 291 aa10.48□□□□□ -0.73
VAMP7-201ENST00000262640 TMEM167AQ8TBQ9 72 aa10.48□□□□□ -0.73
VAMP7-201ENST00000262640 ST8SIA2Q92186 375 aa10.48□□□□□ -0.73
VAMP7-201ENST00000262640 CLCC1Q96S66 551 aa10.48□□□□□ -0.73
VAMP7-201ENST00000262640 TSNAXQ99598 290 aaKnown RBP10.48□□□□□ -0.73
VAMP7-201ENST00000262640 CFDP00746 253 aaPredicted RBP10.48□□□□□ -0.73
VAMP7-201ENST00000262640 EIF5AP63241 154 aaKnown RBP10.48□□□□□ -0.73
VAMP7-201ENST00000262640 NHLH2Q02577 135 aa10.48□□□□□ -0.73
VAMP7-201ENST00000262640 EXOSC2Q13868 293 aaKnown RBP10.48□□□□□ -0.73
VAMP7-201ENST00000262640 LINC01356Q8N9X3 169 aa10.48□□□□□ -0.73
VAMP7-201ENST00000262640 CFHR4Q92496 578 aa10.48□□□□□ -0.73
VAMP7-201ENST00000262640 ZDHHC16Q969W1 377 aa10.48□□□□□ -0.73
VAMP7-201ENST00000262640 TCF19Q9Y242 345 aa10.48□□□□□ -0.73
VAMP7-201ENST00000262640 ZNF257Q9Y2Q1 563 aa10.48□□□□□ -0.73
VAMP7-201ENST00000262640 OR51B2Q9Y5P1 312 aa10.48□□□□□ -0.73
VAMP7-201ENST00000262640 AUP1Q9Y679 476 aa10.48□□□□□ -0.73
VAMP7-201ENST00000262640 H3BP45 60 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 FGF2P09038 288 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 TPT1P13693 172 aaKnown RBP10.47□□□□□ -0.73
VAMP7-201ENST00000262640 SULT1A1P50225 295 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 SSX2Q16385 188 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 CLEC9AQ6UXN8 241 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 MALSU1Q96EH3 234 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 BSCL2Q96G97 398 aaPredicted RBP10.47□□□□□ -0.73
VAMP7-201ENST00000262640 SMIM3Q9BZL3 60 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 UBQLN2Q9UHD9 624 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 CENPEQ02224 2701 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 CENPVL3A0A0U1RRI6 287 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 NPFFO15130 113 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 VENTXO95231 258 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 SPANXN5Q5MJ07 72 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 TEX45Q8NA69 505 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 RITA1Q96K30 269 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 REG4Q9BYZ8 158 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 ITGB1BP2Q9UKP3 347 aa10.47□□□□□ -0.73
VAMP7-201ENST00000262640 ASH1LQ9NR48 2969 aaKnown RBP10.46□□□□□ -0.73
VAMP7-201ENST00000262640 JTBO76095 146 aa10.46□□□□□ -0.73
VAMP7-201ENST00000262640 CST7O76096 145 aa10.46□□□□□ -0.73
VAMP7-201ENST00000262640 RPL8P62917 257 aaKnown RBP10.46□□□□□ -0.73
VAMP7-201ENST00000262640 SPINK9Q5DT21 86 aa10.46□□□□□ -0.73
VAMP7-201ENST00000262640 OR5B3Q8NH48 314 aa10.46□□□□□ -0.73
VAMP7-201ENST00000262640 PHYHIPLQ96FC7 376 aa10.46□□□□□ -0.73
VAMP7-201ENST00000262640 HIPK2Q9H2X6 1198 aa10.46□□□□□ -0.73
VAMP7-201ENST00000262640 HIF1ANQ9NWT6 349 aa10.46□□□□□ -0.73
VAMP7-201ENST00000262640 STRAPQ9Y3F4 350 aaKnown RBP10.46□□□□□ -0.73
VAMP7-201ENST00000262640 ANKRD17O75179 2603 aaKnown RBP10.46□□□□□ -0.73
VAMP7-201ENST00000262640 BORCS7-ASMTA0A0B4J1R7 106 aa10.46□□□□□ -0.74
VAMP7-201ENST00000262640 RNF223E7ERA6 249 aa10.46□□□□□ -0.74
VAMP7-201ENST00000262640 SLC25A17O43808 307 aa10.46□□□□□ -0.74
VAMP7-201ENST00000262640 SAA4P35542 130 aa10.46□□□□□ -0.74
VAMP7-201ENST00000262640 VDAC2P45880 294 aaPredicted RBP10.46□□□□□ -0.74
VAMP7-201ENST00000262640 HOXA1P49639 335 aaPredicted RBP10.46□□□□□ -0.74
VAMP7-201ENST00000262640 TMEM267Q0VDI3 215 aaPredicted RBP10.46□□□□□ -0.74
VAMP7-201ENST00000262640 PSG5Q15238 335 aa10.46□□□□□ -0.74
VAMP7-201ENST00000262640 RPL7L1Q6DKI1 246 aaKnown RBP10.46□□□□□ -0.74
VAMP7-201ENST00000262640 TMEM14EPQ6UXP3 125 aa10.46□□□□□ -0.74
VAMP7-201ENST00000262640 OR1S2Q8NGQ3 325 aa10.46□□□□□ -0.74
VAMP7-201ENST00000262640 DYNLT3P51808 116 aa10.45□□□□□ -0.74
VAMP7-201ENST00000262640 RPP30P78346 268 aaKnown RBP10.45□□□□□ -0.74
VAMP7-201ENST00000262640 BAP18Q8IXM2 172 aa10.45□□□□□ -0.74
VAMP7-201ENST00000262640 DYNAPQ8N1N2 210 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms