RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 MBP02144 154 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 PFN1P07737 140 aaKnown RBP11.24□□□□□ -0.61
VHL-201ENST00000256474 NDUFB7P17568 137 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 CD82P27701 267 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 ZNF90Q03938 601 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 MOB3BQ86TA1 216 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 ZCCHC24Q8N2G6 241 aaKnown RBP11.24□□□□□ -0.61
VHL-201ENST00000256474 MDS2Q8NDY4 140 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 OR4P4Q8NGL7 312 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 CIB3Q96Q77 187 aaPredicted RBP11.24□□□□□ -0.61
VHL-201ENST00000256474 CTDSP1Q9GZU7 261 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 OR6C3Q9NZP0 311 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 PRB4P10163 310 aaPredicted RBP11.23□□□□□ -0.61
VHL-201ENST00000256474 TMEM183AQ8IXX5 376 aa11.23□□□□□ -0.61
VHL-201ENST00000256474 OR10J4P0C629 311 aa11.23□□□□□ -0.61
VHL-201ENST00000256474 CBLN1P23435 193 aa11.23□□□□□ -0.61
VHL-201ENST00000256474 NUBP1P53384 320 aa11.23□□□□□ -0.61
VHL-201ENST00000256474 OR5I1Q13606 314 aa11.23□□□□□ -0.61
VHL-201ENST00000256474 OR2V2Q96R30 315 aa11.23□□□□□ -0.61
VHL-201ENST00000256474 ZDHHC11Q9H8X9 412 aa11.23□□□□□ -0.61
VHL-201ENST00000256474 WIPI2Q9Y4P8 454 aa11.23□□□□□ -0.61
VHL-201ENST00000256474 WNK2Q9Y3S1 2297 aa11.23□□□□□ -0.61
VHL-201ENST00000256474 TRBV24-1A0A075B6N3 115 aa11.23□□□□□ -0.61
VHL-201ENST00000256474 C15orf62A8K5M9 175 aa11.23□□□□□ -0.61
VHL-201ENST00000256474 APELAP0DMC3 54 aa11.23□□□□□ -0.61
VHL-201ENST00000256474 IL3RAP26951 378 aa11.23□□□□□ -0.61
VHL-201ENST00000256474 REG1BP48304 166 aa11.23□□□□□ -0.61
VHL-201ENST00000256474 HSD17B10Q99714 261 aaKnown RBP11.23□□□□□ -0.61
VHL-201ENST00000256474 IQCF6A8MYZ5 107 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 FOXH1O75593 365 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 OR4A8P0C604 315 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 MAS1LP35410 378 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 RND2P52198 227 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 PKIAP61925 76 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 KIAA1644Q3SXP7 199 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 C11orf53Q8IXP5 236 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 DEFB124Q8NES8 71 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 SNRNP40Q96DI7 357 aaKnown RBP11.22□□□□□ -0.61
VHL-201ENST00000256474 COL12A1Q99715 3063 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 ABCA4P78363 2273 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 CDX4O14627 284 aaPredicted RBP11.22□□□□□ -0.61
VHL-201ENST00000256474 OR7C2O60412 319 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 GZMBP10144 247 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 MGST1P10620 155 aaKnown RBP11.22□□□□□ -0.61
VHL-201ENST00000256474 TNFSF10P50591 281 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 NHLRC2Q8NBF2 726 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 LURAP1Q96LR2 239 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 CBLN4Q9NTU7 201 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 TMEM140Q9NV12 185 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 PLXNB1O43157 2135 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 PRB3Q04118 309 aaPredicted RBP11.22□□□□□ -0.61
VHL-201ENST00000256474 Q6ZT83 130 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 MANBALQ9NQG1 85 aa11.22□□□□□ -0.61
VHL-201ENST00000256474 RAB29O14966 203 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 CASP6P55212 293 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 FXYD3Q14802 87 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 MLANAQ16655 118 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 ATP6V1FQ16864 119 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 SLC35E4Q6ICL7 350 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 ZNF705AQ6ZN79 300 aaPredicted RBP11.21□□□□□ -0.61
VHL-201ENST00000256474 LHFPL4Q7Z7J7 247 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 ZNF664Q8N3J9 261 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 RPRMLQ8N4K4 120 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 TMEM18Q96B42 140 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 MISP3Q96FF7 219 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 ZFHX3Q15911 3703 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 FAM90A26D6RGX4 464 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 SP9P0CG40 484 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 KIR2DL2P43627 348 aaPredicted RBP11.21□□□□□ -0.61
VHL-201ENST00000256474 ZNF134P52741 427 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 INO80CQ6PI98 192 aaPredicted RBP11.21□□□□□ -0.61
VHL-201ENST00000256474 ITLN1Q8WWA0 313 aa11.21□□□□□ -0.61
VHL-201ENST00000256474 SEPSECSQ9HD40 501 aaKnown RBP11.21□□□□□ -0.61
VHL-201ENST00000256474 RBFOX2O43251 390 aaKnown RBP eCLIP11.21□□□□□ -0.622e-7■□□□□ 10.8
VHL-201ENST00000256474 RPL29P47914 159 aaKnown RBP11.21□□□□□ -0.62
VHL-201ENST00000256474 PLEKHA3Q9HB20 300 aa11.21□□□□□ -0.62
VHL-201ENST00000256474 RPH3ALQ9UNE2 315 aa11.21□□□□□ -0.62
VHL-201ENST00000256474 LRBAP50851 2863 aa11.21□□□□□ -0.62
VHL-201ENST00000256474 TMEM250H0YL14 139 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 CNN1P51911 297 aaKnown RBP11.2□□□□□ -0.62
VHL-201ENST00000256474 LINC01551Q86U37 167 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 SAMD10Q9BYL1 202 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 DUTP33316 252 aaKnown RBP11.2□□□□□ -0.62
VHL-201ENST00000256474 IER3P46695 156 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 ERVFC1-1P60608 527 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 TRIP6Q15654 476 aaKnown RBP11.2□□□□□ -0.62
VHL-201ENST00000256474 TREML4Q6UXN2 200 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 BAGE3Q86Y29 109 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 BAGE2Q86Y30 109 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 SGK494Q96LW2 274 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 CCL13Q99616 98 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 SPRY4Q9C004 299 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 PROCRQ9UNN8 238 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 PROP1O75360 226 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 FRMD6-AS1P0C7T7 363 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 TGIF2LYQ8IUE0 185 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 ACY3Q96HD9 319 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 MS4A10Q96PG2 267 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 DCAF16Q9NXF7 216 aa11.2□□□□□ -0.62
VHL-201ENST00000256474 TCF19Q9Y242 345 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms