RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 OR4F5Q8NH21 305 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 LHFPL5Q8TAF8 219 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 RBPMSQ93062 196 aaKnown RBP11.16□□□□□ -0.62
VPS25-201ENST00000253794 TPSG1Q9NRR2 321 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 TMEM140Q9NV12 185 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 DUXBA0A1W2PPF3 345 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 FCN1O00602 326 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 DUS4LO95620 317 aaKnown RBP11.15□□□□□ -0.62
VPS25-201ENST00000253794 KRASP01116 189 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 IGKV1-5P01602 117 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 IL5P05113 134 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 ANXA7P20073 488 aaKnown RBP11.15□□□□□ -0.62
VPS25-201ENST00000253794 MAS1LP35410 378 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 COMPP49747 757 aaPredicted RBP11.15□□□□□ -0.62
VPS25-201ENST00000253794 ERVK-16P61578 105 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 DHRS2Q13268 280 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 PLGLAQ15195 96 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 TRIM16LQ309B1 348 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 LYG2Q86SG7 212 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 FAM219AQ8IW50 185 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 MMD2Q8IY49 270 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 SELENOHQ8IZQ5 122 aaKnown RBP11.15□□□□□ -0.62
VPS25-201ENST00000253794 LINC01006Q8NI28 216 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 TMEM158Q8WZ71 300 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 HSPB9Q9BQS6 159 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 WNT10AQ9GZT5 417 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 OR51J1Q9H342 316 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 SERTAD4Q9NUC0 356 aa11.15□□□□□ -0.62
VPS25-201ENST00000253794 TRAV6A0A075B6T7 132 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 A0A0B4J2A0 478 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 SH2D7A6NKC9 451 aaPredicted RBP11.14□□□□□ -0.63
VPS25-201ENST00000253794 UPK2O00526 184 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 CA2P00918 260 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 HLA-AP01891 365 aaKnown RBP11.14□□□□□ -0.63
VPS25-201ENST00000253794 VAMP1P23763 118 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 G6PCP35575 357 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 CX3CL1P78423 397 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 NDPQ00604 133 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 FOXL1Q12952 345 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 ANKRD55Q3KP44 614 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 AARDQ4LEZ3 155 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 PLET1Q6UQ28 207 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 SLC35E3Q7Z769 313 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 LGI3Q8N145 548 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 DMBX1Q8NFW5 382 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 OR2T6Q8NHC8 308 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 LSM10Q969L4 123 aaKnown RBP11.14□□□□□ -0.63
VPS25-201ENST00000253794 ZNF430Q9H8G1 570 aaPredicted RBP11.14□□□□□ -0.63
VPS25-201ENST00000253794 SHPKQ9UHJ6 478 aa11.14□□□□□ -0.63
VPS25-201ENST00000253794 COL6A5A8TX70 2615 aa11.13□□□□□ -0.63
VPS25-201ENST00000253794 CLPSL1A2RUU4 121 aa11.13□□□□□ -0.63
VPS25-201ENST00000253794 AP4M1O00189 453 aa11.13□□□□□ -0.63
VPS25-201ENST00000253794 PRAF2O60831 178 aa11.13□□□□□ -0.63
VPS25-201ENST00000253794 RPL8P62917 257 aaKnown RBP11.13□□□□□ -0.63
VPS25-201ENST00000253794 PJVKQ0ZLH3 352 aa11.13□□□□□ -0.63
VPS25-201ENST00000253794 C4orf46Q504U0 113 aa11.13□□□□□ -0.63
VPS25-201ENST00000253794 C19orf54Q5BKX5 351 aa11.13□□□□□ -0.63
VPS25-201ENST00000253794 TMEM268Q5VZI3 342 aa11.13□□□□□ -0.63
VPS25-201ENST00000253794 SSX9Q7RTT3 188 aa11.13□□□□□ -0.63
VPS25-201ENST00000253794 ZNF695Q8IW36 515 aa11.13□□□□□ -0.63
VPS25-201ENST00000253794 FOXRED2Q8IWF2 684 aa11.13□□□□□ -0.63
VPS25-201ENST00000253794 WIPF2Q8TF74 440 aaPredicted RBP11.13□□□□□ -0.63
VPS25-201ENST00000253794 MITD1Q8WV92 249 aa11.13□□□□□ -0.63
VPS25-201ENST00000253794 C19orf24Q9BVV8 132 aa11.13□□□□□ -0.63
VPS25-201ENST00000253794 BEX1Q9HBH7 125 aa11.13□□□□□ -0.63
VPS25-201ENST00000253794 C15orf61A6NNL5 157 aa11.12□□□□□ -0.63
VPS25-201ENST00000253794 INMT-MINDY4F8WBC2 141 aa11.12□□□□□ -0.63
VPS25-201ENST00000253794 OR9G9P0C7N8 305 aa11.12□□□□□ -0.63
VPS25-201ENST00000253794 EGR2P11161 476 aaPredicted RBP11.12□□□□□ -0.63
VPS25-201ENST00000253794 HLA-GP17693 338 aa11.12□□□□□ -0.63
VPS25-201ENST00000253794 VDAC1P21796 283 aa11.12□□□□□ -0.63
VPS25-201ENST00000253794 VDAC2P45880 294 aaPredicted RBP11.12□□□□□ -0.63
VPS25-201ENST00000253794 PROK1P58294 105 aa11.12□□□□□ -0.63
VPS25-201ENST00000253794 RGS21Q2M5E4 152 aa11.12□□□□□ -0.63
VPS25-201ENST00000253794 NMSQ5H8A3 153 aa11.12□□□□□ -0.63
VPS25-201ENST00000253794 H2BFWTQ7Z2G1 175 aa11.12□□□□□ -0.63
VPS25-201ENST00000253794 ZNF429Q86V71 674 aa11.12□□□□□ -0.63
VPS25-201ENST00000253794 SLC35G3Q8N808 338 aa11.12□□□□□ -0.63
VPS25-201ENST00000253794 TAF15Q92804 592 aaKnown RBP eCLIP11.12□□□□□ -0.63
VPS25-201ENST00000253794 TMEM14BQ9NUH8 114 aa11.12□□□□□ -0.63
VPS25-201ENST00000253794 TNCP24821 2201 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 TRAV3A0A0B4J244 114 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 A0A0G2JRQ6 117 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 LINC01548A6NM66 108 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 ATP6V0E1O15342 81 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 SPNP16150 400 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 MDKP21741 143 aaPredicted RBP11.11□□□□□ -0.63
VPS25-201ENST00000253794 AKR1C2P52895 323 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 CFHR3Q02985 330 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 FXYD3Q14802 87 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 OXA1LQ15070 435 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 C9orf152Q5JTZ5 239 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 STPG2Q8N412 459 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 SGMS2Q8NHU3 365 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 COQ8AQ8NI60 647 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 ZNF431Q8TF32 576 aaPredicted RBP11.11□□□□□ -0.63
VPS25-201ENST00000253794 ARPC1AQ92747 370 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 RRNAD1Q96FB5 475 aaKnown RBP11.11□□□□□ -0.63
VPS25-201ENST00000253794 TMEM68Q96MH6 324 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 CLCC1Q96S66 551 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms