RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 OR51G1Q8NGK1 321 aa12.46□□□□□ -0.41
UBE2D4-201ENST00000222402 ARL14EPLP0DKL9 152 aa12.46□□□□□ -0.42
UBE2D4-201ENST00000222402 TIMM23BQ5SRD1 257 aa12.46□□□□□ -0.42
UBE2D4-201ENST00000222402 SAMD10Q9BYL1 202 aa12.46□□□□□ -0.42
UBE2D4-201ENST00000222402 C11orf1Q9H5F2 150 aa12.46□□□□□ -0.42
UBE2D4-201ENST00000222402 PLSCR4Q9NRQ2 329 aa12.46□□□□□ -0.42
UBE2D4-201ENST00000222402 RBMXL3Q8N7X1 1067 aaKnown RBP12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 RPH3ALQ9UNE2 315 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 MPDU1O75352 247 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 PLGLAQ15195 96 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 TMEM18Q96B42 140 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 NGBQ9NPG2 151 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 OR51B2Q9Y5P1 312 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 YLPM1P49750 1951 aaKnown RBP12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 SPTAN1Q13813 2472 aaKnown RBP12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 SRRM5B3KS81 715 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 ERVFC1-1P60608 527 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 RPL23P62829 140 aaKnown RBP12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 PMS2P11Q13670 270 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 C22orf15Q8WYQ4 148 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 SPINK4O60575 86 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 CXorf1O96002 111 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 ATP5G3P48201 142 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 RPL31P62899 125 aaKnown RBP12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 PSG5Q15238 335 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 STUMQ69YW2 141 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 SSX7Q7RTT5 188 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 FAM216BQ8N7L0 139 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 PRR7Q8TB68 274 aa12.45□□□□□ -0.42
UBE2D4-201ENST00000222402 C1QTNF9BB2RNN3 333 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 DVL1O14640 695 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 TAS2R45P59539 299 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 TIGITQ495A1 244 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 GFI1BQ5VTD9 330 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 BAGE3Q86Y29 109 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 BAGE2Q86Y30 109 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 GCSAMQ8N6F7 178 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 MS4A5Q9H3V2 200 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 PIEZO2Q9H5I5 2752 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 HSPE1P61604 102 aaKnown RBP12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 SGMS2Q8NHU3 365 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 SSUH2Q9Y2M2 353 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 OR5G3P0C626 314 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 LMO1P25800 156 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 HARBI1Q96MB7 349 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 GAL3ST2Q9H3Q3 398 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 SAP30LQ9HAJ7 183 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 PRNDQ9UKY0 176 aa12.44□□□□□ -0.42
UBE2D4-201ENST00000222402 RRHO14718 337 aa12.43□□□□□ -0.42
UBE2D4-201ENST00000222402 NDUFB3O43676 98 aa12.43□□□□□ -0.42
UBE2D4-201ENST00000222402 IGKV1D-33P01593 117 aa12.43□□□□□ -0.42
UBE2D4-201ENST00000222402 IGKV1-33P01594 117 aa12.43□□□□□ -0.42
UBE2D4-201ENST00000222402 ODF3L1Q8IXM7 274 aa12.43□□□□□ -0.42
UBE2D4-201ENST00000222402 FAM216AQ8WUB2 273 aa12.43□□□□□ -0.42
UBE2D4-201ENST00000222402 KLF2Q9Y5W3 355 aaPredicted RBP12.43□□□□□ -0.42
UBE2D4-201ENST00000222402 IGKV1D-17A0A075B6S4 117 aa12.43□□□□□ -0.42
UBE2D4-201ENST00000222402 C1QL4Q86Z23 238 aa12.43□□□□□ -0.42
UBE2D4-201ENST00000222402 OR10G8Q8NGN5 311 aa12.43□□□□□ -0.42
UBE2D4-201ENST00000222402 SCRT1Q9BWW7 348 aa12.43□□□□□ -0.42
UBE2D4-201ENST00000222402 CD81P60033 236 aa12.43□□□□□ -0.42
UBE2D4-201ENST00000222402 ELOVL1Q9BW60 279 aa12.43□□□□□ -0.42
UBE2D4-201ENST00000222402 C16orf97H3BN30 126 aa12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 YPEL1O60688 119 aa12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 IGLV2-14P01704 120 aa12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 ZCCHC24Q8N2G6 241 aaKnown RBP12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 YPEL2Q96QA6 119 aa12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 SLC25A10Q9UBX3 287 aaPredicted RBP12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 SLC25A15Q9Y619 301 aa12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 KIAA1549Q9HCM3 1950 aa12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 TRAV3A0A0B4J244 114 aa12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 WT1P19544 449 aaPredicted RBP12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 LRRC10Q5BKY1 277 aa12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 MBNL2Q5VZF2 373 aaKnown RBP12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 SRD5A3Q9H8P0 318 aa12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 SLC45A2Q9UMX9 530 aa12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 COL6A6A6NMZ7 2263 aa12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 CASP6P55212 293 aa12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 FAM209BQ5JX69 171 aa12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 MRPL37Q9BZE1 423 aaKnown RBP12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 WDR83OSQ9Y284 106 aa12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 MED13LQ71F56 2210 aa12.42□□□□□ -0.42
UBE2D4-201ENST00000222402 CA2P00918 260 aa12.41□□□□□ -0.42
UBE2D4-201ENST00000222402 OPRK1P41145 380 aa12.41□□□□□ -0.42
UBE2D4-201ENST00000222402 RBPJQ06330 500 aa12.41□□□□□ -0.42
UBE2D4-201ENST00000222402 OR4A47Q6IF82 309 aa12.41□□□□□ -0.42
UBE2D4-201ENST00000222402 C11orf53Q8IXP5 236 aa12.41□□□□□ -0.42
UBE2D4-201ENST00000222402 IDI2-AS1Q9NZ38 188 aa12.41□□□□□ -0.42
UBE2D4-201ENST00000222402 PGPEP1LA6NFU8 196 aa12.41□□□□□ -0.42
UBE2D4-201ENST00000222402 SUB1P53999 127 aaKnown RBP eCLIP12.41□□□□□ -0.42
UBE2D4-201ENST00000222402 GNB2P62879 340 aa12.41□□□□□ -0.42
UBE2D4-201ENST00000222402 CFAP54Q96N23 3096 aa12.41□□□□□ -0.42
UBE2D4-201ENST00000222402 SAA2-SAA4A0A096LPE2 208 aa12.41□□□□□ -0.42
UBE2D4-201ENST00000222402 KBTBD11-OT1A0A1B0GTJ5 212 aa12.41□□□□□ -0.42
UBE2D4-201ENST00000222402 SAA2P0DJI9 122 aaPredicted RBP12.41□□□□□ -0.42
UBE2D4-201ENST00000222402 RPRMLQ8N4K4 120 aa12.41□□□□□ -0.42
UBE2D4-201ENST00000222402 C15orf62A8K5M9 175 aa12.4□□□□□ -0.42
UBE2D4-201ENST00000222402 SLC31A2O15432 143 aa12.4□□□□□ -0.42
UBE2D4-201ENST00000222402 SNRPCP09234 159 aaKnown RBP12.4□□□□□ -0.42
UBE2D4-201ENST00000222402 OR10J1P30954 320 aa12.4□□□□□ -0.42
UBE2D4-201ENST00000222402 GNG4P50150 75 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms