RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Gm8677K9J7G9 307 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr194L7N1Y8 306 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 ErhP84089 104 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Vmn1r26Q8R2D7 339 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr214Q8VG27 320 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 DapQ91XC8 102 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Ythdf2Q91YT7 579 aaKnown RBP13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Tmem126bQ9D1R1 230 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 2410004P03RikA0A087WQY2 205 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Ctxnd2A0A1B0GQX3 59 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gm21788J3QNH3 180 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Hyal2O35632 473 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 C2cd4dP0CG09 341 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Hist1h3aP68433 136 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 St8sia5P70126 412 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Fam160a2Q3U2I3 975 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 NmsQ5H8A1 153 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Hsd17b13Q8VCR2 304 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Fzr1Q9R1K5 493 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Zdhhc22A0PK84 263 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 CckarO08786 436 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 TcapO70548 167 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Mdh2P08249 338 aaKnown RBP13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Ctdsp1P58466 261 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Psg26Q4KL65 475 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Sec14l3Q5SQ27 401 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr890Q7TRD9 314 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Prickle3Q80VL3 624 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Q9CQ90 155 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Naa60Q9DBU2 242 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Pet117P0DJF2 80 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Dvl1P51141 695 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Defb20Q30KP3 96 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Taar9Q5QD04 348 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Msl2Q69ZF8 577 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Parp11Q8CFF0 331 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Ntng2Q8R4F1 589 aaKnown RBP13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr1230Q8VG58 305 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr951Q9EQ94 314 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gpx2Q9JHC0 190 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr1289A0A288CFY5 326 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Klf9O35739 244 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Mtatp6P00848 226 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 P01746 140 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Rplp1P47955 114 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Henmt1Q8CAE2 395 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Cysltr2Q920A1 309 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Necap1Q9CR95 275 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Mtfp1Q9CRB8 166 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Utp23Q9CX11 249 aaKnown RBP13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Nup214Q80U93 2085 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Pdcd6P12815 191 aaKnown RBP13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Rps11P62281 158 aaKnown RBP13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Defb4P82019 63 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Rnf150Q5DTZ6 437 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr917Q7TRC3 309 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Zfp799Q8BHK4 648 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr1240Q8VG73 314 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Tmem88Q9D0N8 159 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Urb1Q571H0 2274 aaKnown RBP13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Fndc7A2AED3 737 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Dcaf10A2AKB9 566 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Mex3aG3UYU0 520 aaKnown RBP13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Cnih1O35372 144 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 P10404 641 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Slc25a4P48962 298 aaKnown RBP13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Chrdl1Q920C1 447 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Hist1h1bP43276 223 aaKnown RBP13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Cldn18P56857 264 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Ucp2P70406 309 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gpr135Q7TQP2 457 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Ppp1r14dQ7TT52 146 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Fam53bQ8BGR5 422 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Depp1Q8K2F3 205 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Epdr1Q99M71 224 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Malsu1Q9CWV0 228 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Dph7Q9CYU6 477 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Wdr4Q9EP82 413 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Rab9aQ9R0M6 201 aa13.6□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Ighv7-1A0A075B5S2 121 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Q0VG62 139 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Mob1bQ8BPB0 216 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Mcts2Q9CQ21 181 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Slc50a1Q9CXK4 221 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr1029A2ATE0 324 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr1028Q7TR89 324 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Nudt9Q8BVU5 350 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Rab40cQ8VHQ4 281 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Wdr13Q91V09 485 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Scn2aA0A0J9YTW6 2006 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Rag2P21784 527 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Q149G0 166 aaKnown RBP13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Thap4Q6P3Z3 569 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gtf2h5Q8K2X8 71 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Vmn1r179Q8R2B4 323 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Vmn1r178Q8R2B6 304 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Defb7Q91V70 71 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Igkv9-124A0A0G2JDR3 117 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gm10097J3KMK7 105 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Slc38a11Q3USY0 453 aa13.59□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 65.9 ms