RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 AKIP1Q9NQ31 210 aa12.81□□□□□ -0.36
SMN2-216ENST00000638794 EPPK1P58107 5090 aaKnown RBP12.8□□□□□ -0.36
SMN2-216ENST00000638794 LCE6AA0A183 80 aa12.8□□□□□ -0.36
SMN2-216ENST00000638794 SMIM30A4D0T7 59 aa12.8□□□□□ -0.36
SMN2-216ENST00000638794 BMPR1BO00238 502 aa12.8□□□□□ -0.36
SMN2-216ENST00000638794 DTYMKP23919 212 aa12.8□□□□□ -0.36
SMN2-216ENST00000638794 EXOSC2Q13868 293 aaKnown RBP12.8□□□□□ -0.36
SMN2-216ENST00000638794 C10orf55Q5SWW7 151 aa12.8□□□□□ -0.36
SMN2-216ENST00000638794 C22orf42Q6IC83 251 aa12.8□□□□□ -0.36
SMN2-216ENST00000638794 ZNF645Q8N7E2 425 aa12.8□□□□□ -0.36
SMN2-216ENST00000638794 TRBV9A0A0B4J1U6 114 aa12.79□□□□□ -0.36
SMN2-216ENST00000638794 FAM223BA6NKX1 122 aa12.79□□□□□ -0.36
SMN2-216ENST00000638794 FCGR3BO75015 233 aa12.79□□□□□ -0.36
SMN2-216ENST00000638794 ACTL6BO94805 426 aa12.79□□□□□ -0.36
SMN2-216ENST00000638794 CDK10Q15131 360 aa12.79□□□□□ -0.36
SMN2-216ENST00000638794 IZUMO2Q6UXV1 221 aa12.79□□□□□ -0.36
SMN2-216ENST00000638794 FAM223AQ8IWN6 122 aa12.79□□□□□ -0.36
SMN2-216ENST00000638794 SPIN2AQ99865 258 aa12.79□□□□□ -0.36
SMN2-216ENST00000638794 SPIN2BQ9BPZ2 258 aa12.79□□□□□ -0.36
SMN2-216ENST00000638794 DCUN1D5Q9BTE7 237 aa12.79□□□□□ -0.36
SMN2-216ENST00000638794 TUBA4BQ9H853 241 aa12.79□□□□□ -0.36
SMN2-216ENST00000638794 PEMTQ9UBM1 199 aa12.79□□□□□ -0.36
SMN2-216ENST00000638794 BLOC1S6Q9UL45 172 aa12.79□□□□□ -0.36
SMN2-216ENST00000638794 CREBL2O60519 120 aaPredicted RBP12.78□□□□□ -0.36
SMN2-216ENST00000638794 IGLV2-14P01704 120 aa12.78□□□□□ -0.36
SMN2-216ENST00000638794 NFYAP23511 347 aaPredicted RBP12.78□□□□□ -0.36
SMN2-216ENST00000638794 MECP2P51608 486 aaKnown RBP12.78□□□□□ -0.36
SMN2-216ENST00000638794 RPL30P62888 115 aaKnown RBP12.78□□□□□ -0.36
SMN2-216ENST00000638794 ATP5G2Q06055 141 aa12.78□□□□□ -0.36
SMN2-216ENST00000638794 ARL6IP1Q15041 203 aa12.78□□□□□ -0.36
SMN2-216ENST00000638794 CDNFQ49AH0 187 aa12.78□□□□□ -0.36
SMN2-216ENST00000638794 OR2B11Q5JQS5 317 aa12.78□□□□□ -0.36
SMN2-216ENST00000638794 HACD4Q5VWC8 232 aa12.78□□□□□ -0.36
SMN2-216ENST00000638794 ADAMTSL5Q6ZMM2 481 aa12.78□□□□□ -0.36
SMN2-216ENST00000638794 KCTD9Q7L273 389 aa12.78□□□□□ -0.36
SMN2-216ENST00000638794 MMD2Q8IY49 270 aa12.78□□□□□ -0.36
SMN2-216ENST00000638794 ST6GALNAC5Q9BVH7 336 aa12.78□□□□□ -0.36
SMN2-216ENST00000638794 VCX3BQ9H321 246 aa12.78□□□□□ -0.36
SMN2-216ENST00000638794 OR2W1Q9Y3N9 320 aa12.78□□□□□ -0.36
SMN2-216ENST00000638794 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.77□□□□□ -0.37
SMN2-216ENST00000638794 IGKV1D-13A0A0B4J2D9 117 aa12.77□□□□□ -0.37
SMN2-216ENST00000638794 AIREO43918 545 aa12.77□□□□□ -0.37
SMN2-216ENST00000638794 TUSC2O75896 110 aa12.77□□□□□ -0.37
SMN2-216ENST00000638794 HLA-DQB1P01920 261 aa12.77□□□□□ -0.37
SMN2-216ENST00000638794 IGKV1-13P0DP09 117 aa12.77□□□□□ -0.37
SMN2-216ENST00000638794 GALP22466 123 aa12.77□□□□□ -0.37
SMN2-216ENST00000638794 HSPA13P48723 471 aa12.77□□□□□ -0.37
SMN2-216ENST00000638794 VKORC1L1Q8N0U8 176 aa12.77□□□□□ -0.37
SMN2-216ENST00000638794 TTC9CQ8N5M4 171 aa12.77□□□□□ -0.37
SMN2-216ENST00000638794 NUDCD2Q8WVJ2 157 aa12.77□□□□□ -0.37
SMN2-216ENST00000638794 MRPS7Q9Y2R9 242 aaKnown RBP12.77□□□□□ -0.37
SMN2-216ENST00000638794 RBMX2Q9Y388 322 aaKnown RBP12.77□□□□□ -0.37
SMN2-216ENST00000638794 HYDINQ4G0P3 5121 aa12.76□□□□□ -0.37
SMN2-216ENST00000638794 TMEM235A6NFC5 223 aa12.76□□□□□ -0.37
SMN2-216ENST00000638794 OR2J3O76001 311 aa12.76□□□□□ -0.37
SMN2-216ENST00000638794 CTXN2P0C2S0 81 aa12.76□□□□□ -0.37
SMN2-216ENST00000638794 CD36P16671 472 aa12.76□□□□□ -0.37
SMN2-216ENST00000638794 CD81P60033 236 aa12.76□□□□□ -0.37
SMN2-216ENST00000638794 C15orf32Q32M92 178 aa12.76□□□□□ -0.37
SMN2-216ENST00000638794 CD300EQ496F6 205 aaPredicted RBP12.76□□□□□ -0.37
SMN2-216ENST00000638794 NECAP1Q8NC96 275 aa12.76□□□□□ -0.37
SMN2-216ENST00000638794 OR2K2Q8NGT1 345 aa12.76□□□□□ -0.37
SMN2-216ENST00000638794 DCSTAMPQ9H295 470 aa12.76□□□□□ -0.37
SMN2-216ENST00000638794 PLEKHA3Q9HB20 300 aa12.76□□□□□ -0.37
SMN2-216ENST00000638794 PRELID3BQ9Y3B1 194 aa12.76□□□□□ -0.37
SMN2-216ENST00000638794 HMX3A6NHT5 357 aa12.75□□□□□ -0.37
SMN2-216ENST00000638794 NOTOA8MTQ0 251 aa12.75□□□□□ -0.37
SMN2-216ENST00000638794 TEX22C9J3V5 150 aa12.75□□□□□ -0.37
SMN2-216ENST00000638794 PPP5D1E7EU14 171 aa12.75□□□□□ -0.37
SMN2-216ENST00000638794 SLC22A5O76082 557 aa12.75□□□□□ -0.37
SMN2-216ENST00000638794 IFNA6P05013 189 aa12.75□□□□□ -0.37
SMN2-216ENST00000638794 C19orf35Q6ZS72 473 aa12.75□□□□□ -0.37
SMN2-216ENST00000638794 OR51E2Q9H255 320 aa12.75□□□□□ -0.37
SMN2-216ENST00000638794 RETNQ9HD89 108 aa12.75□□□□□ -0.37
SMN2-216ENST00000638794 ZNF257Q9Y2Q1 563 aa12.75□□□□□ -0.37
SMN2-216ENST00000638794 PLECQ15149 4684 aaKnown RBP12.74□□□□□ -0.37
SMN2-216ENST00000638794 SSX5O60225 188 aa12.74□□□□□ -0.37
SMN2-216ENST00000638794 HLA-AP01891 365 aaKnown RBP12.74□□□□□ -0.37
SMN2-216ENST00000638794 EDN2P20800 178 aa12.74□□□□□ -0.37
SMN2-216ENST00000638794 EIF4EBP1Q13541 118 aaPredicted RBP12.74□□□□□ -0.37
SMN2-216ENST00000638794 CNIH2Q6PI25 160 aa12.74□□□□□ -0.37
SMN2-216ENST00000638794 SLC25A42Q86VD7 318 aa12.74□□□□□ -0.37
SMN2-216ENST00000638794 LAX1Q8IWV1 398 aa12.74□□□□□ -0.37
SMN2-216ENST00000638794 OR4S2Q8NH73 311 aa12.74□□□□□ -0.37
SMN2-216ENST00000638794 TCTEX1D2Q8WW35 142 aa12.74□□□□□ -0.37
SMN2-216ENST00000638794 KCTD12Q96CX2 325 aaKnown RBP12.74□□□□□ -0.37
SMN2-216ENST00000638794 HSD17B10Q99714 261 aaKnown RBP12.74□□□□□ -0.37
SMN2-216ENST00000638794 NEURL2Q9BR09 285 aa12.74□□□□□ -0.37
SMN2-216ENST00000638794 TXNL4BQ9NX01 149 aaKnown RBP12.74□□□□□ -0.37
SMN2-216ENST00000638794 DAPK2Q9UIK4 370 aa12.74□□□□□ -0.37
SMN2-216ENST00000638794 SPATA2Q9UM82 520 aa12.74□□□□□ -0.37
SMN2-216ENST00000638794 DMRT1Q9Y5R6 373 aa12.74□□□□□ -0.37
SMN2-216ENST00000638794 CEPT1Q9Y6K0 416 aa12.74□□□□□ -0.37
SMN2-216ENST00000638794 ZNF785A8K8V0 405 aa12.73□□□□□ -0.37
SMN2-216ENST00000638794 E7EUB6 86 aa12.73□□□□□ -0.37
SMN2-216ENST00000638794 KBTBD11O94819 623 aa12.73□□□□□ -0.37
SMN2-216ENST00000638794 IL6RP08887 468 aaPredicted RBP12.73□□□□□ -0.37
SMN2-216ENST00000638794 CD7P09564 240 aa12.73□□□□□ -0.37
SMN2-216ENST00000638794 FGF9P31371 208 aaPredicted RBP12.73□□□□□ -0.37
SMN2-216ENST00000638794 BRWD1-AS2P59051 145 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms