RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 PPIHO43447 177 aaKnown RBP11.74□□□□□ -0.53
CNOT3-210ENST00000618939 OR4F17Q8NGA8 305 aa11.74□□□□□ -0.53
CNOT3-210ENST00000618939 ZNF714Q96N38 554 aa11.74□□□□□ -0.53
CNOT3-210ENST00000618939 NAPSAO96009 420 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 TMEM11P17152 192 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 WNT5AP41221 380 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 LYZP61626 148 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 CSRP2Q16527 193 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 C10orf113Q5VZT2 155 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 ZNF324BQ6AW86 544 aaPredicted RBP11.73□□□□□ -0.53
CNOT3-210ENST00000618939 SPNS3Q6ZMD2 512 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 WDFY1Q8IWB7 410 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 AMMECR1Q9Y4X0 333 aaPredicted RBP11.73□□□□□ -0.53
CNOT3-210ENST00000618939 CCL20P78556 96 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 TMEM183BQ1AE95 376 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 C1orf162Q8NEQ5 155 aaPredicted RBP11.73□□□□□ -0.53
CNOT3-210ENST00000618939 OR2T6Q8NHC8 308 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 DCTN5Q9BTE1 182 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 NCBP2LA6PVI3 153 aaKnown RBP11.73□□□□□ -0.53
CNOT3-210ENST00000618939 LYL1P12980 280 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 HLA-DRB5Q30154 266 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 AARDQ4LEZ3 155 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 RNASEKQ6P5S7 137 aaKnown RBP11.73□□□□□ -0.53
CNOT3-210ENST00000618939 ZNF497Q6ZNH5 498 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 ASCL5Q7RTU5 278 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 NPCDR1Q9BY65 106 aa11.73□□□□□ -0.53
CNOT3-210ENST00000618939 SERTM2A0A1B0GWG4 89 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 ARL14EPLP0DKL9 152 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 PKIAP61925 76 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 KRTCAP3Q53RY4 240 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 RPL39P5Q59GN2 51 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 IDI2-AS1Q9NZ38 188 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 INSIG2Q9Y5U4 225 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 SRSF7Q16629 238 aaKnown RBP eCLIP11.72□□□□□ -0.53
CNOT3-210ENST00000618939 NDFIP1Q9BT67 221 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 PPP1R14DQ9NXH3 145 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 ZDHHC8Q9ULC8 765 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 EGR1P18146 543 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 GLRXP35754 106 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 ICAM4Q14773 271 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 DIRC2Q96SL1 478 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 AAMDCQ9H7C9 122 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 CYP2G1PQ6ZSU1 146 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 OR1P1Q8NH06 330 aa11.72□□□□□ -0.53
CNOT3-210ENST00000618939 CSRP1P21291 193 aaKnown RBP11.71□□□□□ -0.53
CNOT3-210ENST00000618939 SCGB2A2Q13296 93 aa11.71□□□□□ -0.53
CNOT3-210ENST00000618939 C5orf24Q7Z6I8 188 aa11.71□□□□□ -0.53
CNOT3-210ENST00000618939 ANAPC10Q9UM13 185 aa11.71□□□□□ -0.53
CNOT3-210ENST00000618939 LTBP2Q14767 1821 aa11.71□□□□□ -0.53
CNOT3-210ENST00000618939 KIF26AQ9ULI4 1882 aaPredicted RBP11.71□□□□□ -0.53
CNOT3-210ENST00000618939 A0A087WWC5 75 aa11.71□□□□□ -0.53
CNOT3-210ENST00000618939 IGHV2OR16-5A0A0B4J2B6 119 aa11.71□□□□□ -0.53
CNOT3-210ENST00000618939 AGAP20933 346 aa11.71□□□□□ -0.53
CNOT3-210ENST00000618939 USF1P22415 310 aaPredicted RBP11.71□□□□□ -0.53
CNOT3-210ENST00000618939 RPL8P62917 257 aaKnown RBP11.71□□□□□ -0.53
CNOT3-210ENST00000618939 TFF3Q07654 80 aa11.71□□□□□ -0.53
CNOT3-210ENST00000618939 PQLC2Q6ZP29 291 aa11.71□□□□□ -0.53
CNOT3-210ENST00000618939 STXBP6Q8NFX7 210 aa11.71□□□□□ -0.53
CNOT3-210ENST00000618939 MEGF10Q96KG7 1140 aa11.71□□□□□ -0.53
CNOT3-210ENST00000618939 ARL2-SNX15V9GYD0 113 aa11.71□□□□□ -0.53
CNOT3-210ENST00000618939 APELAP0DMC3 54 aa11.71□□□□□ -0.54
CNOT3-210ENST00000618939 OR5I1Q13606 314 aa11.71□□□□□ -0.54
CNOT3-210ENST00000618939 C9orf106Q8NAJ2 232 aa11.71□□□□□ -0.54
CNOT3-210ENST00000618939 RAB1CQ92928 201 aa11.71□□□□□ -0.54
CNOT3-210ENST00000618939 PERPQ96FX8 193 aa11.71□□□□□ -0.54
CNOT3-210ENST00000618939 CEACAM3P40198 252 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 Q56UQ5 140 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 TIMM23BQ5SRD1 257 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 ASCL4Q6XD76 172 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 OR5AU1Q8NGC0 362 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 SPRR3Q9UBC9 169 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 LY6G6EA0A0G2JKS1 128 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 NMSQ5H8A3 153 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 U3KQA8 63 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 WIPF3A6NGB9 483 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 SS18L1O75177 396 aaPredicted RBP11.7□□□□□ -0.54
CNOT3-210ENST00000618939 LINC00869P0C866 280 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 CA5BP1Q8WTZ4 195 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 BARX1Q9HBU1 254 aaPredicted RBP11.7□□□□□ -0.54
CNOT3-210ENST00000618939 ZNF729A6NN14 1252 aaPredicted RBP11.7□□□□□ -0.54
CNOT3-210ENST00000618939 OR4A8P0C604 315 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 HNRNPA3P51991 378 aaKnown RBP11.7□□□□□ -0.54
CNOT3-210ENST00000618939 Q8WTZ3 238 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 PAXXQ9BUH6 204 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 SRD5A3Q9H8P0 318 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 POLEQ07864 2286 aa11.7□□□□□ -0.54
CNOT3-210ENST00000618939 FER1L5A0AVI2 2057 aa11.69□□□□□ -0.54
CNOT3-210ENST00000618939 A0A1W2PRD5 423 aa11.69□□□□□ -0.54
CNOT3-210ENST00000618939 A0A1W2PRF3 423 aa11.69□□□□□ -0.54
CNOT3-210ENST00000618939 A0A1W2PRM7 423 aa11.69□□□□□ -0.54
CNOT3-210ENST00000618939 COLCA2A8K830 154 aa11.69□□□□□ -0.54
CNOT3-210ENST00000618939 ADCYAP1P18509 176 aa11.69□□□□□ -0.54
CNOT3-210ENST00000618939 RAB1BQ9H0U4 201 aa11.69□□□□□ -0.54
CNOT3-210ENST00000618939 SNRPCP09234 159 aaKnown RBP11.69□□□□□ -0.54
CNOT3-210ENST00000618939 GGACTQ9BVM4 153 aa11.69□□□□□ -0.54
CNOT3-210ENST00000618939 SDF2L1Q9HCN8 221 aa11.69□□□□□ -0.54
CNOT3-210ENST00000618939 ASCL3Q9NQ33 180 aa11.69□□□□□ -0.54
CNOT3-210ENST00000618939 SSX8Q7RTT4 187 aa11.69□□□□□ -0.54
CNOT3-210ENST00000618939 SFXN3Q9BWM7 321 aa11.69□□□□□ -0.54
CNOT3-210ENST00000618939 RPL11P62913 178 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms