RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 STOML3Q8TAV4 291 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 ST8SIA2Q92186 375 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 ST6GALNAC6Q969X2 333 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 CLEC7AQ9BXN2 247 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 BPESC1Q9GZL8 116 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 SLC25A31Q9H0C2 315 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 BARX1Q9HBU1 254 aaPredicted RBP7.25□□□□□ -1.25
CCDC47-207ENST00000612558 LYRM2Q9NU23 88 aaPredicted RBP7.25□□□□□ -1.25
CCDC47-207ENST00000612558 ONECUT1Q9UBC0 465 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 A1L4Q6 167 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 CRYZL1O95825 349 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 HRASP01112 189 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 IGLV1-47P01700 117 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 APOA2P02652 100 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 TPT1P13693 172 aaKnown RBP7.25□□□□□ -1.25
CCDC47-207ENST00000612558 HTR2BP41595 481 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 CAV2P51636 162 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 TAS2R30P59541 319 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 UBE2KP61086 200 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 RPL23AP62750 156 aaKnown RBP7.25□□□□□ -1.25
CCDC47-207ENST00000612558 EIF5AP63241 154 aaKnown RBP7.25□□□□□ -1.25
CCDC47-207ENST00000612558 TNFRSF9Q07011 255 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 HLA-DRB5Q30154 266 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 OR8H3Q8N146 312 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 BEND2Q8NDZ0 799 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 OR5AN1Q8NGI8 311 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 OR13D1Q8NGV5 346 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 SCARB1Q8WTV0 552 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 PHYHIPLQ96FC7 376 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 SMIM8Q96KF7 97 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 AIFM2Q9BRQ8 373 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 MRPL20Q9BYC9 149 aaKnown RBP7.25□□□□□ -1.25
CCDC47-207ENST00000612558 CYTL1Q9NRR1 136 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 SLC35D1Q9NTN3 355 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 HSPB7Q9UBY9 170 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 CACFD1Q9UGQ2 172 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 ITGB1BP2Q9UKP3 347 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 WSB1Q9Y6I7 421 aa7.25□□□□□ -1.25
CCDC47-207ENST00000612558 FAM24AA6NFZ4 105 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 H0YJW9 148 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 BUB1B-PAK6H3BSN5 160 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 NDUFS8O00217 210 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 ENSAO43768 121 aaKnown RBP7.24□□□□□ -1.25
CCDC47-207ENST00000612558 RBMXL2O75526 392 aaKnown RBP7.24□□□□□ -1.25
CCDC47-207ENST00000612558 JTBO76095 146 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 TMEM50AO95807 157 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 ZFP36P26651 326 aaKnown RBP7.24□□□□□ -1.25
CCDC47-207ENST00000612558 REG1BP48304 166 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 PAX9P55771 341 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 ATP5J2P56134 94 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 RAB14P61106 215 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 LMO4P61968 165 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 ARF6P62330 175 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 EWSR1Q01844 656 aaKnown RBP eCLIP7.24□□□□□ -1.25
CCDC47-207ENST00000612558 NHLH2Q02577 135 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 POU2AF1Q16633 256 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 AARDQ4LEZ3 155 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 ALKAL2Q6UX46 152 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 SSX9Q7RTT3 188 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 TGIF2LXQ8IUE1 241 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 BAP18Q8IXM2 172 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 TMEM252Q8N6L7 170 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 KIR3DL3Q8N743 410 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 Q8N7P7 452 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 OR4A16Q8NH70 328 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 CLDND2Q8NHS1 167 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 FAM168AQ92567 244 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 RHOVQ96L33 236 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 NABP2Q9BQ15 211 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 PIMREGQ9BSJ6 248 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 PCGF1Q9BSM1 259 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 TMEM140Q9NV12 185 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 FBXL17Q9UF56 701 aa7.24□□□□□ -1.25
CCDC47-207ENST00000612558 AMMECR1Q9Y4X0 333 aaPredicted RBP7.24□□□□□ -1.25
CCDC47-207ENST00000612558 IGSF23A1L1A6 192 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 A8MXK9 166 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 GAPDHP04406 335 aaKnown RBP7.23□□□□□ -1.25
CCDC47-207ENST00000612558 IGKV1-16P04430 117 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 RPLP1P05386 114 aaKnown RBP7.23□□□□□ -1.25
CCDC47-207ENST00000612558 OR9G9P0C7N8 305 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 PAX1P15863 534 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 PRTN3P24158 256 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 MC5RP33032 325 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 BAXQ07812 192 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 DIAPH2-AS1Q14236 149 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 CLLU1Q5K131 121 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 CLEC2AQ6UVW9 174 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 PDPNQ86YL7 162 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 VKORC1L1Q8N0U8 176 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 OR52E5Q8NH55 327 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 OSR1Q8TAX0 266 aaPredicted RBP7.23□□□□□ -1.25
CCDC47-207ENST00000612558 LHX4Q969G2 390 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 RBKSQ9H477 322 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 UNKLQ9H9P5 680 aaKnown RBP7.23□□□□□ -1.25
CCDC47-207ENST00000612558 PSENENQ9NZ42 101 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 KPTNQ9Y664 436 aa7.23□□□□□ -1.25
CCDC47-207ENST00000612558 USP9YO00507 2555 aaPredicted RBP7.23□□□□□ -1.25
CCDC47-207ENST00000612558 TNCP24821 2201 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 BORCS7-ASMTA0A0B4J1R7 106 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 H7C2Y5 167 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms