RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 DCAF16Q9NXF7 216 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 OR51B2Q9Y5P1 312 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 HELZP42694 1942 aaKnown RBP12.42□□□□□ -0.42
VPS36-207ENST00000611132 TRAV9-1A0A075B6T8 112 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 C1orf194Q5T5A4 169 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 ABHD12Q8N2K0 398 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 NHLRC2Q8NBF2 726 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 C1orf147Q96MC9 270 aaPredicted RBP12.42□□□□□ -0.42
VPS36-207ENST00000611132 IGLV3-32A0A0A0MS00 114 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 A0A1W2PN81 502 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 ZIC3O60481 467 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 NAPSAO96009 420 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 CENPWQ5EE01 88 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 FAM90A2PQ658T7 463 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 STXBP6Q8NFX7 210 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 SCO2A0A1W2PP80 73 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 A6NDN8 102 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 RPL24P83731 157 aaKnown RBP12.42□□□□□ -0.42
VPS36-207ENST00000611132 ZNF826PQ6ZT77 177 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 OR1B1Q8NGR6 318 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 VSTM2AQ8TAG5 236 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 OR4A8P0C604 315 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 PRDX2P32119 198 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 ADMP35318 185 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 ZNF137PP52743 207 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 PAXXQ9BUH6 204 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 WNT10AQ9GZT5 417 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 TCF19Q9Y242 345 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 IGKV1-27A0A075B6S5 117 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 hADV38S2A0JD32 116 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 A8MWL6 223 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 A8MWP6 167 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 PPOXP50336 477 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 RNF166Q96A37 237 aaPredicted RBP12.41□□□□□ -0.42
VPS36-207ENST00000611132 WIPF3A6NGB9 483 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 SOX8P57073 446 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 DOLPP1Q86YN1 238 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 OR2T6Q8NHC8 308 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 NDFIP1Q9BT67 221 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 NGBQ9NPG2 151 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 TMEM140Q9NV12 185 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 SH3BGRL2Q9UJC5 107 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 PLXNB3Q9ULL4 1909 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 FAM87AP0C7U9 286 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 ZNF83P51522 516 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 SPEM2Q0P670 501 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 SLC25A34Q6PIV7 304 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 MESP1Q9BRJ9 268 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 CLDN16Q9Y5I7 305 aa12.41□□□□□ -0.42
VPS36-207ENST00000611132 LEPROTL1O95214 131 aa12.4□□□□□ -0.42
VPS36-207ENST00000611132 CD55P08174 381 aa12.4□□□□□ -0.42
VPS36-207ENST00000611132 CRYGSP22914 178 aa12.4□□□□□ -0.42
VPS36-207ENST00000611132 IL15RAQ13261 267 aa12.4□□□□□ -0.42
VPS36-207ENST00000611132 INO80CQ6PI98 192 aaPredicted RBP12.4□□□□□ -0.42
VPS36-207ENST00000611132 DLEU1O43261 78 aa12.4□□□□□ -0.42
VPS36-207ENST00000611132 MT-CO3P00414 261 aa12.4□□□□□ -0.42
VPS36-207ENST00000611132 COX6A1P12074 109 aa12.4□□□□□ -0.42
VPS36-207ENST00000611132 HSPE1P61604 102 aaKnown RBP12.4□□□□□ -0.42
VPS36-207ENST00000611132 HES1Q14469 280 aa12.4□□□□□ -0.42
VPS36-207ENST00000611132 RPP25LQ8N5L8 163 aaKnown RBP12.4□□□□□ -0.42
VPS36-207ENST00000611132 STPG3Q8N7X2 389 aa12.4□□□□□ -0.42
VPS36-207ENST00000611132 OR4F17Q8NGA8 305 aa12.4□□□□□ -0.42
VPS36-207ENST00000611132 GATAD1Q8WUU5 269 aa12.4□□□□□ -0.42
VPS36-207ENST00000611132 MGST3O14880 152 aa12.4□□□□□ -0.42
VPS36-207ENST00000611132 SSX8Q7RTT4 187 aa12.4□□□□□ -0.42
VPS36-207ENST00000611132 LAMTOR2Q9Y2Q5 125 aa12.4□□□□□ -0.42
VPS36-207ENST00000611132 IGLV3-12A0A075B6K2 115 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 RHBDL1O75783 438 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 HGFACQ04756 655 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 RIGQ13278 110 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 OR1L8Q8NGR8 309 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 FAM131CQ96AQ9 280 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 GAL3ST2Q9H3Q3 398 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 DOCK9Q9BZ29 2069 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 C17orf98A8MV24 154 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 B4E171 279 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 RBP4P02753 201 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 TSPAN7P41732 249 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 KLF3P57682 345 aaPredicted RBP12.39□□□□□ -0.43
VPS36-207ENST00000611132 CDCP2Q5VXM1 449 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 VWA1Q6PCB0 445 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 PERPQ96FX8 193 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 A0A1W2PQM1 296 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 MKRN2OSH3BPM6 223 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 TNFSF13O75888 250 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 C8orf88P0DMB2 117 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 UCP2P55851 309 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 HARBI1Q96MB7 349 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 AAMDCQ9H7C9 122 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 NRN1Q9NPD7 142 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 ALPK3Q96L96 1907 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 TNFRSF1AP19438 455 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 NABP1Q96AH0 204 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 SFXN3Q9BWM7 321 aa12.39□□□□□ -0.43
VPS36-207ENST00000611132 C12orf77C9JDV5 145 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 TNFSF15O95150 251 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 TMEM11P17152 192 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 NABP2Q9BQ15 211 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 PGPEP1LA6NFU8 196 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 GAGE10A6NGK3 116 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms