RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 LGI3Q8N145 548 aa9.81□□□□□ -0.84
TGFB1-204ENST00000600196 Q8N2B8 174 aa9.81□□□□□ -0.84
TGFB1-204ENST00000600196 FAM71E2Q8N5Q1 922 aa9.81□□□□□ -0.84
TGFB1-204ENST00000600196 RBPMSQ93062 196 aaKnown RBP9.81□□□□□ -0.84
TGFB1-204ENST00000600196 LSM10Q969L4 123 aaKnown RBP9.81□□□□□ -0.84
TGFB1-204ENST00000600196 RHOVQ96L33 236 aa9.81□□□□□ -0.84
TGFB1-204ENST00000600196 HARBI1Q96MB7 349 aa9.81□□□□□ -0.84
TGFB1-204ENST00000600196 SLC25A33Q9BSK2 321 aa9.81□□□□□ -0.84
TGFB1-204ENST00000600196 GPN1Q9HCN4 374 aaPredicted RBP9.81□□□□□ -0.84
TGFB1-204ENST00000600196 NUDT15Q9NV35 164 aa9.81□□□□□ -0.84
TGFB1-204ENST00000600196 IGHV3-72A0A0B4J1Y9 119 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 SNRPGP15A8MWD9 76 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 ARPC1BO15143 372 aaKnown RBP9.8□□□□□ -0.84
TGFB1-204ENST00000600196 KCNAB3O43448 404 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 TNFSF12O43508 249 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 GPR137BO60478 399 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 TSPAN9O75954 239 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 OR2A4O95047 310 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 NDUFA7O95182 113 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 IGLV2-23P01705 113 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 HLA-DRB1P01911 266 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 CRYBA1P05813 215 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 SLC25A6P12236 298 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 PI3P19957 117 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 RAB25P57735 213 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 SUPT4H1P63272 117 aaKnown RBP9.8□□□□□ -0.84
TGFB1-204ENST00000600196 TMEM187Q14656 261 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 MMDQ15546 238 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 C5orf64Q2M2E5 130 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 THOC7Q6I9Y2 204 aaKnown RBP9.8□□□□□ -0.84
TGFB1-204ENST00000600196 CCBE1Q6UXH8 406 aaPredicted RBP9.8□□□□□ -0.84
TGFB1-204ENST00000600196 ZNF562Q6V9R5 426 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 GLDNQ6ZMI3 551 aaPredicted RBP9.8□□□□□ -0.84
TGFB1-204ENST00000600196 TMED4Q7Z7H5 227 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 LYG2Q86SG7 212 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 PPP1R27Q86WC6 154 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 PUSL1Q8N0Z8 303 aaKnown RBP9.8□□□□□ -0.84
TGFB1-204ENST00000600196 Q8N9W7 124 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 COQ8AQ8NI60 647 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 TMEM167AQ8TBQ9 72 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 TMEM68Q96MH6 324 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 OR2A7Q96R45 310 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 TP53RKQ96S44 253 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 RASL11BQ9BPW5 248 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 PRSS22Q9GZN4 317 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 FKBP11Q9NYL4 201 aa9.8□□□□□ -0.84
TGFB1-204ENST00000600196 C9orf170A2RU37 121 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 NCBP2LA6PVI3 153 aaKnown RBP9.79□□□□□ -0.84
TGFB1-204ENST00000600196 INMT-MINDY4F8WBC2 141 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 OR5AC1P0C628 307 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 VSIG10L2P0DP72 767 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 VDAC1P21796 283 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 OXA1LQ15070 435 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 LIN54Q6MZP7 749 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 ZNF695Q8IW36 515 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 MMD2Q8IY49 270 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 C5orf56Q8N8D9 126 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 ADAD2Q8NCV1 583 aaKnown RBP9.79□□□□□ -0.84
TGFB1-204ENST00000600196 MITD1Q8WV92 249 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 SEC22AQ96IW7 307 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 SRSF8Q9BRL6 282 aaKnown RBP9.79□□□□□ -0.84
TGFB1-204ENST00000600196 CHIAQ9BZP6 476 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 C16orf95Q9H693 158 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 ESM1Q9NQ30 184 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 COA4Q9NYJ1 87 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 SIGLEC9Q9Y336 463 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 TMED3Q9Y3Q3 217 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 MMP24Q9Y5R2 645 aa9.79□□□□□ -0.84
TGFB1-204ENST00000600196 NIPBLQ6KC79 2804 aaeCLIP9.78□□□□□ -0.84
TGFB1-204ENST00000600196 TEP1Q99973 2627 aaKnown RBP9.78□□□□□ -0.84
TGFB1-204ENST00000600196 MARCH11A6NNE9 402 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 SRRM4A7MD48 611 aaKnown RBP9.78□□□□□ -0.84
TGFB1-204ENST00000600196 RAMP3O60896 148 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 F2RL1P55085 397 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 LINC00205P59089 165 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 DHRS2Q13268 280 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 PPP1R1AQ13522 171 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 HNF4GQ14541 408 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 TRIM16LQ309B1 348 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 AARDQ4LEZ3 155 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 C4orf46Q504U0 113 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 HSD17B13Q7Z5P4 300 aaPredicted RBP9.78□□□□□ -0.84
TGFB1-204ENST00000600196 ZNF431Q8TF32 576 aaPredicted RBP9.78□□□□□ -0.84
TGFB1-204ENST00000600196 CHPT1Q8WUD6 406 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 R3HDM4Q96D70 268 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 RRNAD1Q96FB5 475 aaKnown RBP9.78□□□□□ -0.84
TGFB1-204ENST00000600196 PHB2Q99623 299 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 GON7Q9BXV9 100 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 PRNDQ9UKY0 176 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 FLVCR2Q9UPI3 526 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 ZNF257Q9Y2Q1 563 aa9.78□□□□□ -0.84
TGFB1-204ENST00000600196 TRAV6A0A075B6T7 132 aa9.77□□□□□ -0.85
TGFB1-204ENST00000600196 SNAPC5O75971 98 aa9.77□□□□□ -0.85
TGFB1-204ENST00000600196 KBTBD11O94819 623 aa9.77□□□□□ -0.85
TGFB1-204ENST00000600196 LY86O95711 162 aa9.77□□□□□ -0.85
TGFB1-204ENST00000600196 IGHG2P01859 326 aa9.77□□□□□ -0.85
TGFB1-204ENST00000600196 HLA-AP01891 365 aaKnown RBP9.77□□□□□ -0.85
TGFB1-204ENST00000600196 AMY1AP04745 511 aa9.77□□□□□ -0.85
TGFB1-204ENST00000600196 P0C879 139 aa9.77□□□□□ -0.85
TGFB1-204ENST00000600196 HLA-GP17693 338 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms