RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ZNF345Q14585 488 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 TPTE2P1Q5T6R2 138 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 PDZD9Q8IXQ8 264 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 VKORC1L1Q8N0U8 176 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 OSR1Q8TAX0 266 aaPredicted RBP16.82■□□□□ 0.28
PNKP-203ENST00000593946 WASHC3Q9Y3C0 194 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 TNCP24821 2201 aa16.81■□□□□ 0.28
PNKP-203ENST00000593946 B4DSR2 109 aa16.81■□□□□ 0.28
PNKP-203ENST00000593946 MC5RP33032 325 aa16.81■□□□□ 0.28
PNKP-203ENST00000593946 CEACAM3P40198 252 aa16.81■□□□□ 0.28
PNKP-203ENST00000593946 RAB13P51153 203 aa16.81■□□□□ 0.28
PNKP-203ENST00000593946 ARHGDIBP52566 201 aa16.81■□□□□ 0.28
PNKP-203ENST00000593946 POLR2GP62487 172 aaKnown RBP eCLIP16.81■□□□□ 0.28
PNKP-203ENST00000593946 TMEM177Q53S58 311 aa16.81■□□□□ 0.28
PNKP-203ENST00000593946 SSX9Q7RTT3 188 aa16.81■□□□□ 0.28
PNKP-203ENST00000593946 KRTAP1-3Q8IUG1 177 aa16.81■□□□□ 0.28
PNKP-203ENST00000593946 C11orf1Q9H5F2 150 aa16.81■□□□□ 0.28
PNKP-203ENST00000593946 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.81■□□□□ 0.28
PNKP-203ENST00000593946 TMEM140Q9NV12 185 aa16.81■□□□□ 0.28
PNKP-203ENST00000593946 HECTD1Q9ULT8 2610 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 A0A1W2PPI3 338 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 FAM90A26D6RGX4 464 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 E5RGE8 158 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 KCNAB3O43448 404 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 OR2F2O95006 317 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 NXPH3O95157 252 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 OR9G9P0C7N8 305 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 UBE2E1P51965 193 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 LOXL1Q08397 574 aaPredicted RBP16.8■□□□□ 0.28
PNKP-203ENST00000593946 OR2F1Q13607 317 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 ACOT7LQ6ZUV0 252 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 LHFPL4Q7Z7J7 247 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 INO80EQ8NBZ0 244 aaPredicted RBP16.8■□□□□ 0.28
PNKP-203ENST00000593946 OR4C13Q8NGP0 309 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 LHX4Q969G2 390 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 MAGT1Q9H0U3 335 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 NSG2Q9Y328 171 aa16.8■□□□□ 0.28
PNKP-203ENST00000593946 PRRC2AP48634 2157 aaKnown RBP16.79■□□□□ 0.28
PNKP-203ENST00000593946 FLYWCH2Q96CP2 140 aaKnown RBP16.79■□□□□ 0.28
PNKP-203ENST00000593946 CREBBPQ92793 2442 aa16.79■□□□□ 0.28
PNKP-203ENST00000593946 A0A1W2PRD5 423 aa16.79■□□□□ 0.28
PNKP-203ENST00000593946 A0A1W2PRF3 423 aa16.79■□□□□ 0.28
PNKP-203ENST00000593946 A0A1W2PRM7 423 aa16.79■□□□□ 0.28
PNKP-203ENST00000593946 SRRM4A7MD48 611 aaKnown RBP16.79■□□□□ 0.28
PNKP-203ENST00000593946 SHOXO15266 292 aa16.79■□□□□ 0.28
PNKP-203ENST00000593946 AARDQ4LEZ3 155 aa16.79■□□□□ 0.28
PNKP-203ENST00000593946 MINOS1Q5TGZ0 78 aa16.79■□□□□ 0.28
PNKP-203ENST00000593946 OR4A47Q6IF82 309 aa16.79■□□□□ 0.28
PNKP-203ENST00000593946 TMUB2Q71RG4 321 aa16.79■□□□□ 0.28
PNKP-203ENST00000593946 KCNRGQ8N5I3 272 aa16.79■□□□□ 0.28
PNKP-203ENST00000593946 HARBI1Q96MB7 349 aa16.79■□□□□ 0.28
PNKP-203ENST00000593946 AQP10Q96PS8 301 aa16.79■□□□□ 0.28
PNKP-203ENST00000593946 AIFM2Q9BRQ8 373 aa16.79■□□□□ 0.28
PNKP-203ENST00000593946 HSPB7Q9UBY9 170 aa16.79■□□□□ 0.28
PNKP-203ENST00000593946 MINOS1-NBL1R4GNA1 71 aa16.79■□□□□ 0.28
PNKP-203ENST00000593946 ZANQ9Y493 2812 aa16.78■□□□□ 0.28
PNKP-203ENST00000593946 A0A0D9SG52 128 aa16.78■□□□□ 0.28
PNKP-203ENST00000593946 MSGN1A6NI15 193 aa16.78■□□□□ 0.28
PNKP-203ENST00000593946 SSSCA1O60232 199 aa16.78■□□□□ 0.28
PNKP-203ENST00000593946 S100A11P31949 105 aa16.78■□□□□ 0.28
PNKP-203ENST00000593946 AP2S1P53680 142 aaPredicted RBP16.78■□□□□ 0.28
PNKP-203ENST00000593946 TNFRSF9Q07011 255 aa16.78■□□□□ 0.28
PNKP-203ENST00000593946 MOB3BQ86TA1 216 aa16.78■□□□□ 0.28
PNKP-203ENST00000593946 OR8H3Q8N146 312 aa16.78■□□□□ 0.28
PNKP-203ENST00000593946 REG4Q9BYZ8 158 aa16.78■□□□□ 0.28
PNKP-203ENST00000593946 ARL6Q9H0F7 186 aa16.78■□□□□ 0.28
PNKP-203ENST00000593946 IGHV3-72A0A0B4J1Y9 119 aa16.77■□□□□ 0.28
PNKP-203ENST00000593946 RNF223E7ERA6 249 aa16.77■□□□□ 0.28
PNKP-203ENST00000593946 IL6RP08887 468 aaPredicted RBP16.77■□□□□ 0.28
PNKP-203ENST00000593946 RELBQ01201 579 aa16.77■□□□□ 0.28
PNKP-203ENST00000593946 TBL2Q9Y4P3 447 aaKnown RBP16.77■□□□□ 0.28
PNKP-203ENST00000593946 CELSR1Q9NYQ6 3014 aa16.77■□□□□ 0.27
PNKP-203ENST00000593946 TRAV20A0A0B4J274 112 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 WRBO00258 174 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 SYNGR2O43760 224 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 CHST1O43916 411 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 PVALBP20472 110 aaPredicted RBP16.76■□□□□ 0.27
PNKP-203ENST00000593946 C4BPBP20851 252 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 LGALS4P56470 323 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 HABP2Q14520 560 aaPredicted RBP16.76■□□□□ 0.27
PNKP-203ENST00000593946 LINC01356Q8N9X3 169 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 Q96MF0 132 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 MS4A7Q9GZW8 240 aaPredicted RBP16.76■□□□□ 0.27
PNKP-203ENST00000593946 HILPDAQ9Y5L2 63 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 CSMD1Q96PZ7 3565 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 CCDC168Q8NDH2 2452 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 TRAV3A0A0B4J244 114 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 OOSP1A8MZH6 123 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 TMEM50AO95807 157 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 SAA1P0DJI8 122 aaPredicted RBP16.76■□□□□ 0.27
PNKP-203ENST00000593946 HKR1P10072 659 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 NUP62P37198 522 aaPredicted RBP16.76■□□□□ 0.27
PNKP-203ENST00000593946 P2RY1P47900 373 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 OR2B8PP59922 312 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 IFITM2Q01629 132 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 OPCMLQ14982 345 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 PUSL1Q8N0Z8 303 aaKnown RBP16.76■□□□□ 0.27
PNKP-203ENST00000593946 OR4A16Q8NH70 328 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 HIF1ANQ9NWT6 349 aa16.76■□□□□ 0.27
PNKP-203ENST00000593946 BET1LQ9NYM9 111 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms