RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 PPP1R1AQ13522 171 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 C11orf88Q6PI97 169 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 SLC25A42Q86VD7 318 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 CD300LFQ8TDQ1 290 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 BEX1Q9HBH7 125 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 FAM212BQ9NTI7 297 aaPredicted RBP13.73□□□□□ -0.21
AP3D1-211ENST00000591650 COMMD9Q9P000 198 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 HPRT1P00492 218 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 RPA2P15927 270 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 SPNP16150 400 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 UCP1P25874 307 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 LGALS7P47929 136 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 C5orf64Q2M2E5 130 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 KRTAP24-1Q3LI83 254 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 TMEM128Q5BJH2 165 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 Q6ZS46 218 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 SSX9Q7RTT3 188 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 SGPP2Q8IWX5 399 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.73□□□□□ -0.21
AP3D1-211ENST00000591650 LHFPL5Q8TAF8 219 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 GALNT14Q96FL9 552 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 NPFFR1Q9GZQ6 430 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 TMEM222Q9H0R3 208 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 ZNF702PQ9H963 129 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 PLEKHA2Q9HB19 425 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 C1RLQ9NZP8 487 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 KIAA1456Q9P272 454 aa13.73□□□□□ -0.21
AP3D1-211ENST00000591650 METTL1Q9UBP6 276 aaKnown RBP13.73□□□□□ -0.21
AP3D1-211ENST00000591650 FBN1P35555 2871 aaKnown RBP13.72□□□□□ -0.21
AP3D1-211ENST00000591650 M0QZK8 103 aa13.72□□□□□ -0.21
AP3D1-211ENST00000591650 SERPINE2P07093 398 aa13.72□□□□□ -0.21
AP3D1-211ENST00000591650 VAMP1P23763 118 aa13.72□□□□□ -0.21
AP3D1-211ENST00000591650 RAB25P57735 213 aa13.72□□□□□ -0.21
AP3D1-211ENST00000591650 UBE2KP61086 200 aa13.72□□□□□ -0.21
AP3D1-211ENST00000591650 RPL15P61313 204 aaKnown RBP13.72□□□□□ -0.21
AP3D1-211ENST00000591650 DHODHQ02127 395 aa13.72□□□□□ -0.21
AP3D1-211ENST00000591650 TMEM187Q14656 261 aa13.72□□□□□ -0.21
AP3D1-211ENST00000591650 Q6ZSV7 163 aa13.72□□□□□ -0.21
AP3D1-211ENST00000591650 GLYATL2Q8WU03 294 aa13.72□□□□□ -0.21
AP3D1-211ENST00000591650 ZFAND2BQ8WV99 257 aa13.72□□□□□ -0.21
AP3D1-211ENST00000591650 R3HDM4Q96D70 268 aa13.72□□□□□ -0.21
AP3D1-211ENST00000591650 RHOVQ96L33 236 aa13.72□□□□□ -0.21
AP3D1-211ENST00000591650 NUBP2Q9Y5Y2 271 aa13.72□□□□□ -0.21
AP3D1-211ENST00000591650 CRYGBP07316 175 aa13.71□□□□□ -0.22
AP3D1-211ENST00000591650 H2AFB2P0C5Z0 115 aa13.71□□□□□ -0.22
AP3D1-211ENST00000591650 NQO2P16083 231 aa13.71□□□□□ -0.22
AP3D1-211ENST00000591650 UBE2MP61081 183 aaKnown RBP13.71□□□□□ -0.22
AP3D1-211ENST00000591650 PLGLAQ15195 96 aa13.71□□□□□ -0.22
AP3D1-211ENST00000591650 POU2AF1Q16633 256 aa13.71□□□□□ -0.22
AP3D1-211ENST00000591650 TRIM16LQ309B1 348 aa13.71□□□□□ -0.22
AP3D1-211ENST00000591650 TMEM95Q3KNT9 176 aa13.71□□□□□ -0.22
AP3D1-211ENST00000591650 VMA21Q3ZAQ7 101 aa13.71□□□□□ -0.22
AP3D1-211ENST00000591650 DUSP18Q8NEJ0 188 aa13.71□□□□□ -0.22
AP3D1-211ENST00000591650 RASL11BQ9BPW5 248 aa13.71□□□□□ -0.22
AP3D1-211ENST00000591650 HSPB9Q9BQS6 159 aa13.71□□□□□ -0.22
AP3D1-211ENST00000591650 SIGLEC9Q9Y336 463 aa13.71□□□□□ -0.22
AP3D1-211ENST00000591650 MARCH11A6NNE9 402 aa13.7□□□□□ -0.22
AP3D1-211ENST00000591650 B3GALNT1O75752 331 aa13.7□□□□□ -0.22
AP3D1-211ENST00000591650 PTTG1O95997 202 aa13.7□□□□□ -0.22
AP3D1-211ENST00000591650 HRASP01112 189 aa13.7□□□□□ -0.22
AP3D1-211ENST00000591650 HLA-AP01891 365 aaKnown RBP13.7□□□□□ -0.22
AP3D1-211ENST00000591650 OR4E1P0C645 316 aa13.7□□□□□ -0.22
AP3D1-211ENST00000591650 G6PCP35575 357 aa13.7□□□□□ -0.22
AP3D1-211ENST00000591650 PJVKQ0ZLH3 352 aa13.7□□□□□ -0.22
AP3D1-211ENST00000591650 DHRS2Q13268 280 aa13.7□□□□□ -0.22
AP3D1-211ENST00000591650 MRGPRG-AS1Q2M3A8 158 aa13.7□□□□□ -0.22
AP3D1-211ENST00000591650 C9orf152Q5JTZ5 239 aa13.7□□□□□ -0.22
AP3D1-211ENST00000591650 OR4A47Q6IF82 309 aa13.7□□□□□ -0.22
AP3D1-211ENST00000591650 PUSL1Q8N0Z8 303 aaKnown RBP13.7□□□□□ -0.22
AP3D1-211ENST00000591650 CLCC1Q96S66 551 aa13.7□□□□□ -0.22
AP3D1-211ENST00000591650 RANBP3Q9H6Z4 567 aaPredicted RBP13.7□□□□□ -0.22
AP3D1-211ENST00000591650 TMEM140Q9NV12 185 aa13.7□□□□□ -0.22
AP3D1-211ENST00000591650 TET2Q6N021 2002 aaPredicted RBP13.7□□□□□ -0.22
AP3D1-211ENST00000591650 FCN1O00602 326 aa13.69□□□□□ -0.22
AP3D1-211ENST00000591650 KBTBD11O94819 623 aa13.69□□□□□ -0.22
AP3D1-211ENST00000591650 SFT2D2O95562 160 aa13.69□□□□□ -0.22
AP3D1-211ENST00000591650 KRASP01116 189 aa13.69□□□□□ -0.22
AP3D1-211ENST00000591650 IGKV1-5P01602 117 aa13.69□□□□□ -0.22
AP3D1-211ENST00000591650 HLA-DRB1P01911 266 aa13.69□□□□□ -0.22
AP3D1-211ENST00000591650 CRYBA1P05813 215 aa13.69□□□□□ -0.22
AP3D1-211ENST00000591650 MECP2P51608 486 aaKnown RBP13.69□□□□□ -0.22
AP3D1-211ENST00000591650 RAG2P55895 527 aa13.69□□□□□ -0.22
AP3D1-211ENST00000591650 ERVK-16P61578 105 aa13.69□□□□□ -0.22
AP3D1-211ENST00000591650 SSBP2P81877 361 aaPredicted RBP13.69□□□□□ -0.22
AP3D1-211ENST00000591650 NDPQ00604 133 aa13.69□□□□□ -0.22
AP3D1-211ENST00000591650 ANKRD55Q3KP44 614 aa13.69□□□□□ -0.22
AP3D1-211ENST00000591650 DMBX1Q8NFW5 382 aa13.69□□□□□ -0.22
AP3D1-211ENST00000591650 OR52B4Q8NGK2 314 aa13.69□□□□□ -0.22
AP3D1-211ENST00000591650 CASTOR1Q8WTX7 329 aa13.69□□□□□ -0.22
AP3D1-211ENST00000591650 SEC22AQ96IW7 307 aa13.69□□□□□ -0.22
AP3D1-211ENST00000591650 C9orf170A2RU37 121 aa13.68□□□□□ -0.22
AP3D1-211ENST00000591650 CDS2O95674 445 aa13.68□□□□□ -0.22
AP3D1-211ENST00000591650 CA2P00918 260 aa13.68□□□□□ -0.22
AP3D1-211ENST00000591650 ANXA3P12429 323 aa13.68□□□□□ -0.22
AP3D1-211ENST00000591650 C4orf46Q504U0 113 aa13.68□□□□□ -0.22
AP3D1-211ENST00000591650 TMEM268Q5VZI3 342 aa13.68□□□□□ -0.22
AP3D1-211ENST00000591650 PLET1Q6UQ28 207 aa13.68□□□□□ -0.22
AP3D1-211ENST00000591650 LYG2Q86SG7 212 aa13.68□□□□□ -0.22
AP3D1-211ENST00000591650 PPP1R27Q86WC6 154 aa13.68□□□□□ -0.22
AP3D1-211ENST00000591650 SELENOHQ8IZQ5 122 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms