RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 HIPK2Q9H2X6 1198 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 TUBA4BQ9H853 241 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 GNB4Q9HAV0 340 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 PARP11Q9NR21 331 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 FKBP14Q9NWM8 211 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 SLC2A8Q9NY64 477 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 KCNIP1Q9NZI2 227 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 TRAPPC2LQ9UL33 140 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 STUB1Q9UNE7 303 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 POMPQ9Y244 141 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 CSDC2Q9Y534 153 aaKnown RBP4.29□□□□□ -1.72
DNMT1-220ENST00000589351 LRRC42Q9Y546 428 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 AP4S1Q9Y587 144 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 WSB1Q9Y6I7 421 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 IGHV3-43A0A0B4J1X8 118 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 TRAV39A0A0B4J263 110 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 ZNF736B4DX44 427 aaPredicted RBP4.28□□□□□ -1.72
DNMT1-220ENST00000589351 H0Y980 276 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 GABRPO00591 440 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 HSPA12AO43301 675 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 TRIAP1O43715 76 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 CA11O75493 328 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 FADS2O95864 444 aaKnown RBP4.28□□□□□ -1.72
DNMT1-220ENST00000589351 MT-ND4P03905 459 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 HSPB1P04792 205 aaKnown RBP4.28□□□□□ -1.72
DNMT1-220ENST00000589351 T-ENOLP0DO92 83 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 IGHV3-43DP0DP04 118 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 SLC2A2P11168 524 aaPredicted RBP4.28□□□□□ -1.72
DNMT1-220ENST00000589351 GTF2F2P13984 249 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 ZNF93P35789 620 aaPredicted RBP4.28□□□□□ -1.72
DNMT1-220ENST00000589351 ZNF137PP52743 207 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 RBM11P57052 281 aaKnown RBP4.28□□□□□ -1.72
DNMT1-220ENST00000589351 ACTBP60709 375 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 VBP1P61758 197 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 GNB1P62873 340 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 USF2Q15853 346 aaPredicted RBP4.28□□□□□ -1.72
DNMT1-220ENST00000589351 PIGYQ3MUY2 71 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 NHLRC3Q5JS37 347 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 SAPCD1Q5SSQ6 148 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 SYT6Q5T7P8 510 aaPredicted RBP4.28□□□□□ -1.72
DNMT1-220ENST00000589351 LPCAT4Q643R3 524 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 ZNF660Q6AZW8 331 aaPredicted RBP4.28□□□□□ -1.72
DNMT1-220ENST00000589351 ASCL4Q6XD76 172 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 GTSCR1Q86UQ5 136 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 SYS1Q8N2H4 156 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 OR4C5Q8NGB2 326 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 OR51A4Q8NGJ6 313 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 OR10K1Q8NGX5 313 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 OR10AC1Q8NH08 325 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 MARCH1Q8TCQ1 289 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 PHYHIPQ92561 330 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 MRPS24Q96EL2 167 aaKnown RBP4.28□□□□□ -1.72
DNMT1-220ENST00000589351 PELI1Q96FA3 418 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 Q96MT0 163 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 CIB1Q99828 191 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 ST6GALNAC5Q9BVH7 336 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 ALG8Q9BVK2 526 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 TOLLIPQ9H0E2 274 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 GABARAPL1Q9H0R8 117 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 KLK15Q9H2R5 256 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 SLA2Q9H6Q3 261 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 OR2S2Q9NQN1 319 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 CLEC5AQ9NY25 188 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 PIPOXQ9P0Z9 390 aa4.28□□□□□ -1.72
DNMT1-220ENST00000589351 EXOGQ9Y2C4 368 aaKnown RBP4.28□□□□□ -1.72
DNMT1-220ENST00000589351 SORL1Q92673 2214 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 G3V318 75 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 C15orf65H3BRN8 121 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 GEMIN2O14893 280 aaKnown RBP4.27□□□□□ -1.73
DNMT1-220ENST00000589351 ATP6V0E1O15342 81 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 CDRT1O95170 752 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 LGALS1P09382 135 aaKnown RBP4.27□□□□□ -1.73
DNMT1-220ENST00000589351 IGHV4-30-4P0DP06 118 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 ARSBP15848 533 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 SERPINA2P20848 420 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 ZP3P21754 424 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 PSMB6P28072 239 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 BDKRB2P30411 391 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 RASSF2P50749 326 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 SNRPEP62304 92 aaKnown RBP4.27□□□□□ -1.73
DNMT1-220ENST00000589351 BLOC1S1P78537 153 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 NHLH2Q02577 135 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 RAB40BQ12829 278 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 KIAA0141Q14154 515 aaPredicted RBP4.27□□□□□ -1.73
DNMT1-220ENST00000589351 ECSCRQ19T08 205 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 C5orf64Q2M2E5 130 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 LINC01620Q4KN68 170 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 AKIRIN2Q53H80 203 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 CT45A1Q5HYN5 189 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 SLC25A30Q5SVS4 291 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 ZNF497Q6ZNH5 498 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 ZNF554Q86TJ5 538 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 LHFPL3Q86UP9 236 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 OR1L4Q8NGR5 311 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 CT45A3Q8NHU0 189 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 GPR148Q8TDV2 347 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 ARPC1AQ92747 370 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 CENPNQ96H22 339 aaPredicted RBP4.27□□□□□ -1.73
DNMT1-220ENST00000589351 PDCD1LG2Q9BQ51 273 aa4.27□□□□□ -1.73
DNMT1-220ENST00000589351 GABARAPL3Q9BY60 117 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms