RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 MINOS1-NBL1R4GNA1 71 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 FAM208BQ5VWN6 2430 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 ROS1P08922 2347 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 KMT2BQ9UMN6 2715 aaPredicted RBP5.04□□□□□ -1.6
LIG3-206ENST00000586058 IGHV4-30-2A0A087WSY4 118 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 TRAV14DV4A0A0A6YYC5 116 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 KIAA1324LA8MWY0 1029 aaPredicted RBP5.04□□□□□ -1.6
LIG3-206ENST00000586058 VWC2LB2RUY7 222 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 DFFBO76075 338 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 KBTBD11O94819 623 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 SPDEFO95238 335 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 IGLV1-47P01700 117 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 MBPP02686 304 aaPredicted RBP5.04□□□□□ -1.6
LIG3-206ENST00000586058 LYL1P12980 280 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 HOXB4P17483 251 aaPredicted RBP5.04□□□□□ -1.6
LIG3-206ENST00000586058 COL8A1P27658 744 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 LGALS7P47929 136 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 UBE2E1P51965 193 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 F2RL1P55085 397 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 LMO4P61968 165 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 EIF4EBP1Q13541 118 aaPredicted RBP5.04□□□□□ -1.6
LIG3-206ENST00000586058 HES1Q14469 280 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 ZNF266Q14584 549 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 MIDNQ504T8 468 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 ZNF585BQ52M93 769 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 TPTE2P1Q5T6R2 138 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 FAM53AQ6NSI3 398 aaPredicted RBP5.04□□□□□ -1.6
LIG3-206ENST00000586058 C1orf229Q6ZS94 237 aaPredicted RBP5.04□□□□□ -1.6
LIG3-206ENST00000586058 TMUB2Q71RG4 321 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 SLC51BQ86UW2 128 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 ODF3L1Q8IXM7 274 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 ZNF295-AS1Q8N0V1 137 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 KCNRGQ8N5I3 272 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 ARL6IP6Q8N6S5 226 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 LINC01356Q8N9X3 169 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 ZNF383Q8NA42 475 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 OR11H6Q8NGC7 330 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 OR8H1Q8NGG4 311 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 OR5AN1Q8NGI8 311 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 OR4P4Q8NGL7 312 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 DTD1Q8TEA8 209 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 DDB2Q92466 427 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 GPR146Q96CH1 333 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 MBD6Q96DN6 1003 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 AQP10Q96PS8 301 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 NABP2Q9BQ15 211 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 ZNF251Q9BRH9 671 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 COMMD5Q9GZQ3 224 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 UNKLQ9H9P5 680 aaKnown RBP5.04□□□□□ -1.6
LIG3-206ENST00000586058 PLEKHA3Q9HB20 300 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 LYRM2Q9NU23 88 aaPredicted RBP5.04□□□□□ -1.6
LIG3-206ENST00000586058 PSENENQ9NZ42 101 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 OR5AC2Q9NZP5 309 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 UBQLN2Q9UHD9 624 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 POLR3KQ9Y2Y1 108 aaPredicted RBP5.04□□□□□ -1.6
LIG3-206ENST00000586058 AUP1Q9Y679 476 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 WSB1Q9Y6I7 421 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 DOPEY1Q5JWR5 2465 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 USF3Q68DE3 2245 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 MALRD1Q5VYJ5 2156 aa5.04□□□□□ -1.6
LIG3-206ENST00000586058 TRAV40A0A0B4J280 105 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 IGHV1-3A0A0C4DH29 117 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 IGHV4-61A0A0C4DH41 118 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 A0A1W2PN81 502 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 C15orf61A6NNL5 157 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 H0YJW9 148 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 J3QLI3 93 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 FCN3O75636 299 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 TSPAN9O75954 239 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 JTBO76095 146 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 IGKV1-39P01597 117 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 IGKV1-5P01602 117 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 IGKV1D-39P04432 117 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 OR8U8P0C7N1 319 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 CT45A6P0DMU7 189 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 CT45A5P0DMU8 189 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 CT45A7P0DMV0 189 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 IAPPP10997 89 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 CHRNA7P36544 502 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 TAS2R30P59541 319 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 OR2B8PP59922 312 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 SPCS3P61009 180 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 UBE2KP61086 200 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 POLR2GP62487 172 aaKnown RBP eCLIP5.03□□□□□ -1.6
LIG3-206ENST00000586058 RAB11AP62491 216 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 TNFRSF9Q07011 255 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 KLRD1Q13241 179 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 POU2AF1Q16633 256 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 TMEM177Q53S58 311 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 OR4A47Q6IF82 309 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 PRSS57Q6UWY2 283 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 MMD2Q8IY49 270 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 OR2C3Q8N628 320 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 OR11H4Q8NGC9 324 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 OR1S2Q8NGQ3 325 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 OR2T10Q8NGZ9 312 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 OR5B3Q8NH48 314 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 OR52E5Q8NH55 327 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 NRGNQ92686 78 aa5.03□□□□□ -1.6
LIG3-206ENST00000586058 PINX1Q96BK5 328 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms